RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 MAPKBP1O60336 1514 aa22.48■■□□□ 1.19
CNOT3-204ENST00000447684 DEKP35659 375 aaKnown RBP22.47■■□□□ 1.19
CNOT3-204ENST00000447684 SIN3AQ96ST3 1273 aa22.47■■□□□ 1.19
CNOT3-204ENST00000447684 ATAD2BQ9ULI0 1458 aa22.46■■□□□ 1.19
CNOT3-204ENST00000447684 PPP1R15AO75807 674 aaPredicted RBP22.44■■□□□ 1.18
CNOT3-204ENST00000447684 RAB3GAP2Q9H2M9 1393 aa22.41■■□□□ 1.18
CNOT3-204ENST00000447684 CCER2I3L3R5 266 aa22.4■■□□□ 1.18
CNOT3-204ENST00000447684 PABPN1Q86U42 306 aaKnown RBP eCLIP22.39■■□□□ 1.17
CNOT3-204ENST00000447684 HNRNPUQ00839 825 aaKnown RBP eCLIP22.37■■□□□ 1.17
CNOT3-204ENST00000447684 WDR97A6NE52 1622 aa22.36■■□□□ 1.17
CNOT3-204ENST00000447684 NBR1Q14596 966 aa22.36■■□□□ 1.17
CNOT3-204ENST00000447684 ARHGAP35Q9NRY4 1499 aa22.34■■□□□ 1.17
CNOT3-204ENST00000447684 MYT1LQ9UL68 1186 aa22.33■■□□□ 1.17
CNOT3-204ENST00000447684 SETD5Q9C0A6 1442 aa22.29■■□□□ 1.16
CNOT3-204ENST00000447684 KIF27Q86VH2 1401 aa22.27■■□□□ 1.16
CNOT3-204ENST00000447684 ANO8Q9HCE9 1232 aaPredicted RBP22.25■■□□□ 1.15
CNOT3-204ENST00000447684 MAP3K1Q13233 1512 aa22.25■■□□□ 1.15
CNOT3-204ENST00000447684 TIAM1Q13009 1591 aa22.25■■□□□ 1.15
CNOT3-204ENST00000447684 FAM50AQ14320 339 aaKnown RBP22.24■■□□□ 1.15
CNOT3-204ENST00000447684 CUX1P39880 1505 aa22.22■■□□□ 1.15
CNOT3-204ENST00000447684 TIMELESSQ9UNS1 1208 aa22.21■■□□□ 1.15
CNOT3-204ENST00000447684 B4GALNT3Q6L9W6 998 aa22.2■■□□□ 1.14
CNOT3-204ENST00000447684 PPP4R2Q9NY27 417 aa22.18■■□□□ 1.14
CNOT3-204ENST00000447684 NOP58Q9Y2X3 529 aaKnown RBP22.17■■□□□ 1.14
CNOT3-204ENST00000447684 LRRC9Q6ZRR7 1453 aa22.14■■□□□ 1.13
CNOT3-204ENST00000447684 PAK3O75914 559 aaPredicted RBP22.14■■□□□ 1.13
CNOT3-204ENST00000447684 PHLDB1Q86UU1 1377 aa22.11■■□□□ 1.13
CNOT3-204ENST00000447684 SALL2Q9Y467 1007 aaPredicted RBP22.07■■□□□ 1.12
CNOT3-204ENST00000447684 RTL5Q5HYW3 569 aaPredicted RBP22.06■■□□□ 1.12
CNOT3-204ENST00000447684 CFAP43Q8NDM7 1665 aa22.06■■□□□ 1.12
CNOT3-204ENST00000447684 TONSLQ96HA7 1378 aa22.06■■□□□ 1.12
CNOT3-204ENST00000447684 ATP1B4Q9UN42 357 aaPredicted RBP22.05■■□□□ 1.12
CNOT3-204ENST00000447684 RTN4Q9NQC3 1192 aaKnown RBP22.04■■□□□ 1.12
CNOT3-204ENST00000447684 ERICH6BQ5W0A0 696 aa22.02■■□□□ 1.12
CNOT3-204ENST00000447684 CCDC136Q96JN2 1154 aa22.01■■□□□ 1.11
CNOT3-204ENST00000447684 FAM9BQ8IZU0 186 aa22■■□□□ 1.11
CNOT3-204ENST00000447684 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
CNOT3-204ENST00000447684 HMGXB3Q12766 1538 aa21.97■■□□□ 1.11
CNOT3-204ENST00000447684 IL27Q8NEV9 243 aa21.96■■□□□ 1.11
CNOT3-204ENST00000447684 ANP32AP39687 249 aaKnown RBP21.95■■□□□ 1.1
CNOT3-204ENST00000447684 IGF1RP08069 1367 aa21.95■■□□□ 1.1
CNOT3-204ENST00000447684 PCF11O94913 1555 aaKnown RBP21.95■■□□□ 1.1
CNOT3-204ENST00000447684 CCDC184Q52MB2 194 aa21.95■■□□□ 1.1
CNOT3-204ENST00000447684 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.94■■□□□ 1.1
CNOT3-204ENST00000447684 CFTRP13569 1480 aa21.93■■□□□ 1.1
CNOT3-204ENST00000447684 ZBTB47Q9UFB7 747 aaPredicted RBP21.92■■□□□ 1.1
CNOT3-204ENST00000447684 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.89■■□□□ 1.09
CNOT3-204ENST00000447684 NCAPD3P42695 1498 aa21.89■■□□□ 1.09
CNOT3-204ENST00000447684 IPO9Q96P70 1041 aaKnown RBP21.87■■□□□ 1.09
CNOT3-204ENST00000447684 CARMIL1Q5VZK9 1371 aa21.87■■□□□ 1.09
CNOT3-204ENST00000447684 P3H3Q8IVL6 736 aa21.87■■□□□ 1.09
CNOT3-204ENST00000447684 MRS2Q9HD23 443 aa21.87■■□□□ 1.09
CNOT3-204ENST00000447684 PRDM2Q13029 1718 aa21.84■■□□□ 1.09
CNOT3-204ENST00000447684 WASHC2AQ641Q2 1341 aa21.84■■□□□ 1.09
CNOT3-204ENST00000447684 CCDC18Q5T9S5 1454 aa21.84■■□□□ 1.09
CNOT3-204ENST00000447684 CNGB1Q14028 1251 aaPredicted RBP21.83■■□□□ 1.08
CNOT3-204ENST00000447684 FYCO1Q9BQS8 1478 aa21.82■■□□□ 1.08
CNOT3-204ENST00000447684 HSPA5P11021 654 aaKnown RBP21.82■■□□□ 1.08
CNOT3-204ENST00000447684 NPM2Q86SE8 214 aaKnown RBP21.82■■□□□ 1.08
CNOT3-204ENST00000447684 UACAQ9BZF9 1416 aa21.81■■□□□ 1.08
CNOT3-204ENST00000447684 KDM5BQ9UGL1 1544 aa21.78■■□□□ 1.08
CNOT3-204ENST00000447684 SENP3-EIF4A1A0A087X0R7 540 aa21.78■■□□□ 1.08
CNOT3-204ENST00000447684 HFM1A2PYH4 1435 aa21.77■■□□□ 1.08
CNOT3-204ENST00000447684 FGD6Q6ZV73 1430 aa21.77■■□□□ 1.08
CNOT3-204ENST00000447684 PTPN23Q9H3S7 1636 aa21.77■■□□□ 1.08
CNOT3-204ENST00000447684 ZBED9Q6R2W3 1325 aa21.77■■□□□ 1.07
CNOT3-204ENST00000447684 FGD5Q6ZNL6 1462 aa21.76■■□□□ 1.07
CNOT3-204ENST00000447684 LAS1LQ9Y4W2 734 aaKnown RBP21.76■■□□□ 1.07
CNOT3-204ENST00000447684 CASKIN1Q8WXD9 1431 aa21.76■■□□□ 1.07
CNOT3-204ENST00000447684 AQRO60306 1485 aaKnown RBP eCLIP21.75■■□□□ 1.077e-9■■■■■ 27
CNOT3-204ENST00000447684 FHOD3Q2V2M9 1422 aa21.73■■□□□ 1.07
CNOT3-204ENST00000447684 EFCAB5A4FU69 1503 aa21.73■■□□□ 1.07
CNOT3-204ENST00000447684 PRKRIP1Q9H875 184 aaPredicted RBP21.72■■□□□ 1.07
CNOT3-204ENST00000447684 NEFMP07197 916 aa21.7■■□□□ 1.07
CNOT3-204ENST00000447684 EIF4G2P78344 907 aaKnown RBP eCLIP21.7■■□□□ 1.07
CNOT3-204ENST00000447684 AKNAQ7Z591 1439 aa21.7■■□□□ 1.06
CNOT3-204ENST00000447684 PTPRKQ15262 1439 aa21.69■■□□□ 1.06
CNOT3-204ENST00000447684 NCOA2Q15596 1464 aa21.69■■□□□ 1.06
CNOT3-204ENST00000447684 NAIPQ13075 1403 aa21.66■■□□□ 1.06
CNOT3-204ENST00000447684 CNTLNQ9NXG0 1405 aa21.66■■□□□ 1.06
CNOT3-204ENST00000447684 C11orf95C9JLR9 678 aaPredicted RBP21.64■■□□□ 1.05
CNOT3-204ENST00000447684 EIF5BO60841 1220 aaKnown RBP21.6■■□□□ 1.05
CNOT3-204ENST00000447684 FMN1Q68DA7 1419 aa21.6■■□□□ 1.05
CNOT3-204ENST00000447684 SNAPC4Q5SXM2 1469 aa21.59■■□□□ 1.05
CNOT3-204ENST00000447684 CTTNBP2Q8WZ74 1663 aa21.58■■□□□ 1.05
CNOT3-204ENST00000447684 POLR3GLQ9BT43 218 aa21.58■■□□□ 1.05
CNOT3-204ENST00000447684 MTUS2Q5JR59 1369 aa21.57■■□□□ 1.04
CNOT3-204ENST00000447684 NUDCQ9Y266 331 aa21.57■■□□□ 1.04
CNOT3-204ENST00000447684 MYOM3Q5VTT5 1437 aa21.55■■□□□ 1.04
CNOT3-204ENST00000447684 HECW1Q76N89 1606 aa21.55■■□□□ 1.04
CNOT3-204ENST00000447684 CCDC7Q96M83 1385 aa21.54■■□□□ 1.04
CNOT3-204ENST00000447684 BRPF3Q9ULD4 1205 aa21.54■■□□□ 1.04
CNOT3-204ENST00000447684 RRP7BPQ9NSQ0 103 aa21.53■■□□□ 1.04
CNOT3-204ENST00000447684 NCOA1Q15788 1441 aa21.53■■□□□ 1.04
CNOT3-204ENST00000447684 CADPSQ9ULU8 1353 aa21.52■■□□□ 1.04
CNOT3-204ENST00000447684 CHIC2Q9UKJ5 165 aa21.52■■□□□ 1.04
CNOT3-204ENST00000447684 CC2D2AQ9P2K1 1620 aa21.52■■□□□ 1.04
CNOT3-204ENST00000447684 SMG6Q86US8 1419 aaKnown RBP21.52■■□□□ 1.04
CNOT3-204ENST00000447684 LRRIQ1Q96JM4 1722 aa21.51■■□□□ 1.03
CNOT3-204ENST00000447684 GCC2Q8IWJ2 1684 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms