RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 MAGI1Q96QZ7 1491 aaPredicted RBP9.14□□□□□ -0.95
PROM1-201ENST00000447510 ERICH3Q5RHP9 1530 aa9.13□□□□□ -0.95
PROM1-201ENST00000447510 SYNJ2O15056 1496 aa9.12□□□□□ -0.95
PROM1-201ENST00000447510 JPH4Q96JJ6 628 aa9.12□□□□□ -0.95
PROM1-201ENST00000447510 ARID3CA6NKF2 412 aa9.1□□□□□ -0.95
PROM1-201ENST00000447510 TNIKQ9UKE5 1360 aa9.09□□□□□ -0.95
PROM1-201ENST00000447510 PRXQ9BXM0 1461 aa9.09□□□□□ -0.95
PROM1-201ENST00000447510 ABCA5Q8WWZ7 1642 aa9.09□□□□□ -0.95
PROM1-201ENST00000447510 GRIN2AQ12879 1464 aa9.08□□□□□ -0.96
PROM1-201ENST00000447510 CLIP1P30622 1438 aa9.08□□□□□ -0.96
PROM1-201ENST00000447510 CUL7Q14999 1698 aa9.07□□□□□ -0.96
PROM1-201ENST00000447510 WDR97A6NE52 1622 aa9.07□□□□□ -0.96
PROM1-201ENST00000447510 CARMIL2Q6F5E8 1435 aa9.07□□□□□ -0.96
PROM1-201ENST00000447510 NPM1P06748 294 aaKnown RBP eCLIP9.06□□□□□ -0.96
PROM1-201ENST00000447510 PBRM1Q86U86 1689 aa9.06□□□□□ -0.96
PROM1-201ENST00000447510 ADAMTS12P58397 1594 aa9.05□□□□□ -0.96
PROM1-201ENST00000447510 CEP162Q5TB80 1403 aa9.05□□□□□ -0.96
PROM1-201ENST00000447510 CYB5RLQ6IPT4 315 aa9.03□□□□□ -0.96
PROM1-201ENST00000447510 KIF21BO75037 1637 aa9.03□□□□□ -0.96
PROM1-201ENST00000447510 KIAA0586Q9BVV6 1533 aa9.02□□□□□ -0.97
PROM1-201ENST00000447510 PRG4Q92954 1404 aaPredicted RBP9.01□□□□□ -0.97
PROM1-201ENST00000447510 GTF3C3Q9Y5Q9 886 aa9□□□□□ -0.97
PROM1-201ENST00000447510 PTPRGP23470 1445 aa8.99□□□□□ -0.97
PROM1-201ENST00000447510 FHOD3Q2V2M9 1422 aa8.99□□□□□ -0.97
PROM1-201ENST00000447510 CDK11AQ9UQ88 783 aaPredicted RBP8.98□□□□□ -0.97
PROM1-201ENST00000447510 NUP160Q12769 1436 aa8.97□□□□□ -0.97
PROM1-201ENST00000447510 IQGAP2Q13576 1575 aa8.97□□□□□ -0.97
PROM1-201ENST00000447510 CHD1O14646 1710 aa8.97□□□□□ -0.97
PROM1-201ENST00000447510 NEUROD1Q13562 356 aa8.96□□□□□ -0.98
PROM1-201ENST00000447510 TRIM26Q12899 539 aaPredicted RBP8.95□□□□□ -0.98
PROM1-201ENST00000447510 ACIN1Q9UKV3 1341 aaKnown RBP8.95□□□□□ -0.98
PROM1-201ENST00000447510 KCNH8Q96L42 1107 aa8.95□□□□□ -0.98
PROM1-201ENST00000447510 CEP170Q5SW79 1584 aa8.94□□□□□ -0.98
PROM1-201ENST00000447510 FMN1Q68DA7 1419 aa8.94□□□□□ -0.98
PROM1-201ENST00000447510 PLEKHD1A6NEE1 506 aa8.94□□□□□ -0.98
PROM1-201ENST00000447510 ZEB1P37275 1124 aaPredicted RBP8.93□□□□□ -0.98
PROM1-201ENST00000447510 CENPBP07199 599 aaPredicted RBP8.93□□□□□ -0.98
PROM1-201ENST00000447510 ARHGAP35Q9NRY4 1499 aa8.91□□□□□ -0.98
PROM1-201ENST00000447510 TRHP20396 242 aaPredicted RBP8.9□□□□□ -0.98
PROM1-201ENST00000447510 MTUS2Q5JR59 1369 aa8.9□□□□□ -0.98
PROM1-201ENST00000447510 YTHDC1Q96MU7 727 aaKnown RBP8.89□□□□□ -0.99
PROM1-201ENST00000447510 VPS8Q8N3P4 1428 aa8.89□□□□□ -0.99
PROM1-201ENST00000447510 EFCAB5A4FU69 1503 aa8.89□□□□□ -0.99
PROM1-201ENST00000447510 CTTNBP2Q8WZ74 1663 aa8.89□□□□□ -0.99
PROM1-201ENST00000447510 MYT1LQ9UL68 1186 aa8.89□□□□□ -0.99
PROM1-201ENST00000447510 DNAJC5Q9H3Z4 198 aa8.88□□□□□ -0.99
PROM1-201ENST00000447510 ARAP1Q96P48 1450 aa8.88□□□□□ -0.99
PROM1-201ENST00000447510 UGGT2Q9NYU1 1516 aa8.87□□□□□ -0.99
PROM1-201ENST00000447510 ZNF777Q9ULD5 760 aaPredicted RBP8.87□□□□□ -0.99
PROM1-201ENST00000447510 ITGAEP38570 1179 aa8.86□□□□□ -0.99
PROM1-201ENST00000447510 UACAQ9BZF9 1416 aa8.86□□□□□ -0.99
PROM1-201ENST00000447510 FAM50AQ14320 339 aaKnown RBP8.85□□□□□ -0.99
PROM1-201ENST00000447510 PLB1Q6P1J6 1458 aa8.84□□□□□ -0.99
PROM1-201ENST00000447510 DISP1Q96F81 1524 aa8.84□□□□□ -0.99
PROM1-201ENST00000447510 ARHGEF11O15085 1522 aa8.84□□□□□ -0.99
PROM1-201ENST00000447510 CLASP1Q7Z460 1538 aa8.84□□□□□ -0.99
PROM1-201ENST00000447510 KIAA0556O60303 1618 aa8.84□□□□□ -0.99
PROM1-201ENST00000447510 CASKIN1Q8WXD9 1431 aa8.82□□□□□ -1
PROM1-201ENST00000447510 ERCC6L2Q5T890 1561 aa8.82□□□□□ -1
PROM1-201ENST00000447510 KANK4Q5T7N3 995 aaPredicted RBP8.81□□□□□ -1
PROM1-201ENST00000447510 FAM69CQ0P6D2 419 aa8.8□□□□□ -1
PROM1-201ENST00000447510 CFDP1Q9UEE9 299 aaPredicted RBP8.79□□□□□ -1
PROM1-201ENST00000447510 FYCO1Q9BQS8 1478 aa8.78□□□□□ -1
PROM1-201ENST00000447510 CCNB3Q8WWL7 1395 aa8.78□□□□□ -1
PROM1-201ENST00000447510 SAMD9Q5K651 1589 aa8.77□□□□□ -1
PROM1-201ENST00000447510 CCDC18Q5T9S5 1454 aa8.77□□□□□ -1.01
PROM1-201ENST00000447510 HECW1Q76N89 1606 aa8.77□□□□□ -1.01
PROM1-201ENST00000447510 EPRSP07814 1512 aaKnown RBP8.76□□□□□ -1.01
PROM1-201ENST00000447510 CDK13Q14004 1512 aaKnown RBP8.76□□□□□ -1.01
PROM1-201ENST00000447510 DIEXFQ68CQ4 756 aaKnown RBP8.76□□□□□ -1.01
PROM1-201ENST00000447510 BCL11AQ9H165 835 aa8.76□□□□□ -1.01
PROM1-201ENST00000447510 PCF11O94913 1555 aaKnown RBP8.76□□□□□ -1.01
PROM1-201ENST00000447510 CCER1Q8TC90 406 aaPredicted RBP8.75□□□□□ -1.01
PROM1-201ENST00000447510 RIMBP3CA6NJZ7 1639 aa8.75□□□□□ -1.01
PROM1-201ENST00000447510 RIMBP3BA6NNM3 1639 aa8.75□□□□□ -1.01
PROM1-201ENST00000447510 RIMBP3Q9UFD9 1639 aa8.75□□□□□ -1.01
PROM1-201ENST00000447510 RAPGEF6Q8TEU7 1601 aa8.75□□□□□ -1.01
PROM1-201ENST00000447510 SHROOM2Q13796 1616 aa8.74□□□□□ -1.01
PROM1-201ENST00000447510 ABCC2Q92887 1545 aa8.74□□□□□ -1.01
PROM1-201ENST00000447510 EFCAB2Q5VUJ9 269 aa8.74□□□□□ -1.01
PROM1-201ENST00000447510 ATP10BO94823 1461 aa8.74□□□□□ -1.01
PROM1-201ENST00000447510 NUP153P49790 1475 aaKnown RBP8.74□□□□□ -1.01
PROM1-201ENST00000447510 TSPY4P0CV99 314 aa8.72□□□□□ -1.01
PROM1-201ENST00000447510 TSPY10P0CW01 314 aa8.72□□□□□ -1.01
PROM1-201ENST00000447510 TROQ12816 1431 aaPredicted RBP8.72□□□□□ -1.01
PROM1-201ENST00000447510 ASXL2Q76L83 1435 aa8.72□□□□□ -1.01
PROM1-201ENST00000447510 CHIC2Q9UKJ5 165 aa8.71□□□□□ -1.01
PROM1-201ENST00000447510 LRRC9Q6ZRR7 1453 aa8.71□□□□□ -1.02
PROM1-201ENST00000447510 ABCA8O94911 1581 aa8.7□□□□□ -1.02
PROM1-201ENST00000447510 UHRF1BP1LA0JNW5 1464 aa8.69□□□□□ -1.02
PROM1-201ENST00000447510 TIAM1Q13009 1591 aa8.69□□□□□ -1.02
PROM1-201ENST00000447510 HNRNPMP52272 730 aaKnown RBP eCLIP8.68□□□□□ -1.02
PROM1-201ENST00000447510 WDR7Q9Y4E6 1490 aa8.68□□□□□ -1.02
PROM1-201ENST00000447510 NCOA2Q15596 1464 aa8.67□□□□□ -1.02
PROM1-201ENST00000447510 EHBP1L1Q8N3D4 1523 aa8.67□□□□□ -1.02
PROM1-201ENST00000447510 KDM5BQ9UGL1 1544 aa8.67□□□□□ -1.02
PROM1-201ENST00000447510 CD109Q6YHK3 1445 aa8.67□□□□□ -1.02
PROM1-201ENST00000447510 ZNF644Q9H582 1327 aaPredicted RBP8.65□□□□□ -1.02
PROM1-201ENST00000447510 ADCY10Q96PN6 1610 aa8.64□□□□□ -1.03
PROM1-201ENST00000447510 TRIM52Q96A61 297 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms