RNA–Protein interactions for RNA: ENST00000447009.1

APTR-205, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 2 BASIC

Gene APTR, Length 902 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-205ENST00000447009 KIF27Q86VH2 1401 aa35.95■■■■□ 3.35
APTR-205ENST00000447009 KIF13AQ9H1H9 1805 aa35.94■■■■□ 3.34
APTR-205ENST00000447009 IGF1RP08069 1367 aa35.91■■■■□ 3.34
APTR-205ENST00000447009 KIAA0586Q9BVV6 1533 aa35.85■■■■□ 3.33
APTR-205ENST00000447009 ADCY10Q96PN6 1610 aa35.79■■■■□ 3.32
APTR-205ENST00000447009 AEBP2Q6ZN18 517 aaPredicted RBP35.77■■■■□ 3.32
APTR-205ENST00000447009 NPM1P06748 294 aaKnown RBP eCLIP35.72■■■■□ 3.31
APTR-205ENST00000447009 CARMIL1Q5VZK9 1371 aa35.71■■■■□ 3.31
APTR-205ENST00000447009 MAPKBP1O60336 1514 aa35.71■■■■□ 3.31
APTR-205ENST00000447009 ABCC10Q5T3U5 1492 aa35.68■■■■□ 3.3
APTR-205ENST00000447009 DIP2BQ9P265 1576 aa35.65■■■■□ 3.3
APTR-205ENST00000447009 FAM69CQ0P6D2 419 aa35.65■■■■□ 3.3
APTR-205ENST00000447009 TTBK1Q5TCY1 1321 aaPredicted RBP35.57■■■■□ 3.29
APTR-205ENST00000447009 IQGAP2Q13576 1575 aa35.56■■■■□ 3.28
APTR-205ENST00000447009 PTPRGP23470 1445 aa35.55■■■■□ 3.28
APTR-205ENST00000447009 CARMIL2Q6F5E8 1435 aa35.5■■■■□ 3.27
APTR-205ENST00000447009 TSPOAP1O95153 1857 aa35.48■■■■□ 3.27
APTR-205ENST00000447009 TNIKQ9UKE5 1360 aa35.48■■■■□ 3.27
APTR-205ENST00000447009 ABCC2Q92887 1545 aa35.39■■■■□ 3.26
APTR-205ENST00000447009 RAPGEF2Q9Y4G8 1499 aa35.39■■■■□ 3.26
APTR-205ENST00000447009 KDM6BO15054 1643 aa35.38■■■■□ 3.25
APTR-205ENST00000447009 DISP1Q96F81 1524 aa35.37■■■■□ 3.25
APTR-205ENST00000447009 UGGT2Q9NYU1 1516 aa35.3■■■■□ 3.24
APTR-205ENST00000447009 ASXL2Q76L83 1435 aa35.29■■■■□ 3.24
APTR-205ENST00000447009 UHRF1BP1LA0JNW5 1464 aa35.29■■■■□ 3.24
APTR-205ENST00000447009 UACAQ9BZF9 1416 aa35.28■■■■□ 3.24
APTR-205ENST00000447009 KIAA0556O60303 1618 aa35.26■■■■□ 3.24
APTR-205ENST00000447009 PLB1Q6P1J6 1458 aa35.23■■■■□ 3.23
APTR-205ENST00000447009 CTTNBP2Q8WZ74 1663 aa35.21■■■■□ 3.23
APTR-205ENST00000447009 PPRC1Q5VV67 1664 aaKnown RBP35.18■■■■□ 3.22
APTR-205ENST00000447009 GLI2P10070 1586 aa35.18■■■■□ 3.22
APTR-205ENST00000447009 ZCCHC11Q5TAX3 1644 aaKnown RBP35.15■■■■□ 3.22
APTR-205ENST00000447009 KDM5BQ9UGL1 1544 aa35.14■■■■□ 3.22
APTR-205ENST00000447009 EPRSP07814 1512 aaKnown RBP35.07■■■■□ 3.21
APTR-205ENST00000447009 MAP3K4Q9Y6R4 1608 aa35.04■■■■□ 3.2
APTR-205ENST00000447009 GOLGA3Q08378 1498 aa34.99■■■■□ 3.19
APTR-205ENST00000447009 KDM4FA0A1W2PPD8 638 aa34.99■■■■□ 3.19
APTR-205ENST00000447009 PRXQ9BXM0 1461 aa34.98■■■■□ 3.19
APTR-205ENST00000447009 WDR7Q9Y4E6 1490 aa34.93■■■■□ 3.18
APTR-205ENST00000447009 ABCA8O94911 1581 aa34.91■■■■□ 3.18
APTR-205ENST00000447009 TEX14Q8IWB6 1497 aa34.9■■■■□ 3.18
APTR-205ENST00000447009 COL17A1Q9UMD9 1497 aaPredicted RBP34.88■■■■□ 3.17
APTR-205ENST00000447009 CFAP43Q8NDM7 1665 aa34.76■■■■□ 3.16
APTR-205ENST00000447009 ADGRL1O94910 1474 aa34.76■■■■□ 3.15
APTR-205ENST00000447009 KCNH8Q96L42 1107 aa34.74■■■■□ 3.15
APTR-205ENST00000447009 P3H3Q8IVL6 736 aa34.73■■■■□ 3.15
APTR-205ENST00000447009 CD109Q6YHK3 1445 aa34.71■■■■□ 3.15
APTR-205ENST00000447009 ARID3CA6NKF2 412 aa34.69■■■■□ 3.14
APTR-205ENST00000447009 MAGI3Q5TCQ9 1506 aa34.67■■■■□ 3.14
APTR-205ENST00000447009 CSRNP3Q8WYN3 585 aa34.66■■■■□ 3.14
APTR-205ENST00000447009 SAMD9Q5K651 1589 aa34.64■■■■□ 3.14
APTR-205ENST00000447009 FAM9AQ8IZU1 332 aaPredicted RBP34.6■■■■□ 3.13
APTR-205ENST00000447009 ATP10BO94823 1461 aa34.58■■■■□ 3.13
APTR-205ENST00000447009 RAPGEF6Q8TEU7 1601 aa34.55■■■■□ 3.12
APTR-205ENST00000447009 EEA1Q15075 1411 aa34.51■■■■□ 3.12
APTR-205ENST00000447009 RANGAP1P46060 587 aaPredicted RBP34.49■■■■□ 3.11
APTR-205ENST00000447009 ABCA9Q8IUA7 1624 aa34.47■■■■□ 3.11
APTR-205ENST00000447009 KIF21BO75037 1637 aa34.43■■■■□ 3.1
APTR-205ENST00000447009 FHOD3Q2V2M9 1422 aa34.42■■■■□ 3.1
APTR-205ENST00000447009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.4■■■■□ 3.1
APTR-205ENST00000447009 HNRNPUL2Q1KMD3 747 aaKnown RBP34.4■■■■□ 3.1
APTR-205ENST00000447009 ARAP3Q8WWN8 1544 aa34.4■■■■□ 3.1
APTR-205ENST00000447009 NUP153P49790 1475 aaKnown RBP34.39■■■■□ 3.1
APTR-205ENST00000447009 HECW2Q9P2P5 1572 aa34.32■■■■□ 3.09
APTR-205ENST00000447009 NEO1Q92859 1461 aa34.26■■■■□ 3.07
APTR-205ENST00000447009 EFCAB5A4FU69 1503 aa34.25■■■■□ 3.07
APTR-205ENST00000447009 PHLDB1Q86UU1 1377 aa34.25■■■■□ 3.07
APTR-205ENST00000447009 RAPGEF3O95398 923 aa34.22■■■■□ 3.07
APTR-205ENST00000447009 FRMPD1Q5SYB0 1578 aa34.21■■■■□ 3.07
APTR-205ENST00000447009 EHMT2Q96KQ7 1210 aa34.16■■■■□ 3.06
APTR-205ENST00000447009 PLEKHD1A6NEE1 506 aa34.15■■■■□ 3.06
APTR-205ENST00000447009 TTC37Q6PGP7 1564 aa34.11■■■■□ 3.05
APTR-205ENST00000447009 CDK13Q14004 1512 aaKnown RBP34.1■■■■□ 3.05
APTR-205ENST00000447009 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.1■■■■□ 3.05
APTR-205ENST00000447009 ADAMTSL3P82987 1691 aa34.09■■■■□ 3.05
APTR-205ENST00000447009 CFAP74Q9C0B2 1584 aa34.07■■■■□ 3.05
APTR-205ENST00000447009 RICTORQ6R327 1708 aa34.06■■■■□ 3.04
APTR-205ENST00000447009 FANCAO15360 1455 aa34.04■■■■□ 3.04
APTR-205ENST00000447009 BCORL1Q5H9F3 1711 aa34.04■■■■□ 3.04
APTR-205ENST00000447009 DENND4BO75064 1496 aaPredicted RBP34.03■■■■□ 3.04
APTR-205ENST00000447009 UBTFP17480 764 aaKnown RBP34.03■■■■□ 3.04
APTR-205ENST00000447009 ILDR1Q86SU0 546 aaPredicted RBP34.03■■■■□ 3.04
APTR-205ENST00000447009 ARHGEF40Q8TER5 1519 aa34.03■■■■□ 3.04
APTR-205ENST00000447009 AKNAQ7Z591 1439 aa34.03■■■■□ 3.04
APTR-205ENST00000447009 PTPRMP28827 1452 aa34.01■■■■□ 3.03
APTR-205ENST00000447009 ARID4BQ4LE39 1312 aaPredicted RBP34■■■■□ 3.03
APTR-205ENST00000447009 MADDQ8WXG6 1647 aa33.98■■■■□ 3.03
APTR-205ENST00000447009 HECW1Q76N89 1606 aa33.97■■■■□ 3.03
APTR-205ENST00000447009 CHIC1Q5VXU3 224 aa33.95■■■■□ 3.03
APTR-205ENST00000447009 ARHGAP35Q9NRY4 1499 aa33.95■■■■□ 3.02
APTR-205ENST00000447009 ATP1B4Q9UN42 357 aaPredicted RBP33.94■■■■□ 3.02
APTR-205ENST00000447009 FMN1Q68DA7 1419 aa33.92■■■■□ 3.02
APTR-205ENST00000447009 ZMYM4Q5VZL5 1548 aa33.89■■■■□ 3.02
APTR-205ENST00000447009 RIMS1Q86UR5 1692 aaKnown RBP33.88■■■■□ 3.01
APTR-205ENST00000447009 ZFYVE16Q7Z3T8 1539 aa33.86■■■■□ 3.01
APTR-205ENST00000447009 MYO5CQ9NQX4 1742 aa33.84■■■■□ 3.01
APTR-205ENST00000447009 PLCH2O75038 1416 aa33.83■■■■□ 3.01
APTR-205ENST00000447009 SIGLEC1Q9BZZ2 1709 aa33.83■■■■□ 3.01
APTR-205ENST00000447009 YEATS2Q9ULM3 1422 aa33.83■■■■□ 3.01
APTR-205ENST00000447009 KIF14Q15058 1648 aa33.82■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms