RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 CUL7Q14999 1698 aa22.87■■□□□ 1.25
GARNL3-208ENST00000444677 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
GARNL3-208ENST00000444677 PRG4Q92954 1404 aaPredicted RBP22.85■■□□□ 1.25
GARNL3-208ENST00000444677 KIAA0586Q9BVV6 1533 aa22.82■■□□□ 1.24
GARNL3-208ENST00000444677 RAPGEF2Q9Y4G8 1499 aa22.8■■□□□ 1.24
GARNL3-208ENST00000444677 TRHP20396 242 aaPredicted RBP22.79■■□□□ 1.24
GARNL3-208ENST00000444677 FAM9AQ8IZU1 332 aaPredicted RBP22.76■■□□□ 1.23
GARNL3-208ENST00000444677 CSRNP3Q8WYN3 585 aa22.75■■□□□ 1.23
GARNL3-208ENST00000444677 PRXQ9BXM0 1461 aa22.72■■□□□ 1.23
GARNL3-208ENST00000444677 TTBK1Q5TCY1 1321 aaPredicted RBP22.66■■□□□ 1.22
GARNL3-208ENST00000444677 IQGAP2Q13576 1575 aa22.62■■□□□ 1.21
GARNL3-208ENST00000444677 EEA1Q15075 1411 aa22.6■■□□□ 1.21
GARNL3-208ENST00000444677 PTPRGP23470 1445 aa22.57■■□□□ 1.2
GARNL3-208ENST00000444677 CARMIL2Q6F5E8 1435 aa22.57■■□□□ 1.2
GARNL3-208ENST00000444677 DISP1Q96F81 1524 aa22.56■■□□□ 1.2
GARNL3-208ENST00000444677 TNIKQ9UKE5 1360 aa22.55■■□□□ 1.2
GARNL3-208ENST00000444677 KIF13AQ9H1H9 1805 aa22.54■■□□□ 1.2
GARNL3-208ENST00000444677 EHMT2Q96KQ7 1210 aa22.53■■□□□ 1.2
GARNL3-208ENST00000444677 ADCY10Q96PN6 1610 aa22.53■■□□□ 1.2
GARNL3-208ENST00000444677 UGGT2Q9NYU1 1516 aa22.52■■□□□ 1.2
GARNL3-208ENST00000444677 CTTNBP2Q8WZ74 1663 aa22.46■■□□□ 1.19
GARNL3-208ENST00000444677 NPM1P06748 294 aaKnown RBP eCLIP22.46■■□□□ 1.19
GARNL3-208ENST00000444677 P3H3Q8IVL6 736 aa22.45■■□□□ 1.18
GARNL3-208ENST00000444677 RANGAP1P46060 587 aaPredicted RBP22.44■■□□□ 1.18
GARNL3-208ENST00000444677 KIAA0556O60303 1618 aa22.42■■□□□ 1.18
GARNL3-208ENST00000444677 MAPKBP1O60336 1514 aa22.39■■□□□ 1.17
GARNL3-208ENST00000444677 UACAQ9BZF9 1416 aa22.39■■□□□ 1.17
GARNL3-208ENST00000444677 GOLGA3Q08378 1498 aa22.37■■□□□ 1.17
GARNL3-208ENST00000444677 DIP2BQ9P265 1576 aa22.36■■□□□ 1.17
GARNL3-208ENST00000444677 UBTFP17480 764 aaKnown RBP22.35■■□□□ 1.17
GARNL3-208ENST00000444677 KIF21BO75037 1637 aa22.34■■□□□ 1.17
GARNL3-208ENST00000444677 UHRF1BP1LA0JNW5 1464 aa22.32■■□□□ 1.16
GARNL3-208ENST00000444677 ABCC2Q92887 1545 aa22.31■■□□□ 1.16
GARNL3-208ENST00000444677 PLB1Q6P1J6 1458 aa22.31■■□□□ 1.16
GARNL3-208ENST00000444677 FAM69CQ0P6D2 419 aa22.31■■□□□ 1.16
GARNL3-208ENST00000444677 ABCC10Q5T3U5 1492 aa22.3■■□□□ 1.16
GARNL3-208ENST00000444677 TSPOAP1O95153 1857 aa22.29■■□□□ 1.16
GARNL3-208ENST00000444677 ARID3CA6NKF2 412 aa22.24■■□□□ 1.15
GARNL3-208ENST00000444677 FHOD3Q2V2M9 1422 aa22.23■■□□□ 1.15
GARNL3-208ENST00000444677 ASXL2Q76L83 1435 aa22.23■■□□□ 1.15
GARNL3-208ENST00000444677 KDM5BQ9UGL1 1544 aa22.22■■□□□ 1.15
GARNL3-208ENST00000444677 SAMD9Q5K651 1589 aa22.22■■□□□ 1.15
GARNL3-208ENST00000444677 ABCA8O94911 1581 aa22.21■■□□□ 1.15
GARNL3-208ENST00000444677 ZCCHC11Q5TAX3 1644 aaKnown RBP22.2■■□□□ 1.15
GARNL3-208ENST00000444677 KDM6BO15054 1643 aa22.12■■□□□ 1.13
GARNL3-208ENST00000444677 PPRC1Q5VV67 1664 aaKnown RBP22.11■■□□□ 1.13
GARNL3-208ENST00000444677 ATP10BO94823 1461 aa22.1■■□□□ 1.13
GARNL3-208ENST00000444677 KCNH8Q96L42 1107 aa22.1■■□□□ 1.13
GARNL3-208ENST00000444677 ARHGAP35Q9NRY4 1499 aa22.09■■□□□ 1.13
GARNL3-208ENST00000444677 EFCAB5A4FU69 1503 aa22.08■■□□□ 1.13
GARNL3-208ENST00000444677 EPRSP07814 1512 aaKnown RBP22.08■■□□□ 1.13
GARNL3-208ENST00000444677 GLI2P10070 1586 aa22.08■■□□□ 1.12
GARNL3-208ENST00000444677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.06■■□□□ 1.12
GARNL3-208ENST00000444677 HNRNPUL2Q1KMD3 747 aaKnown RBP22.06■■□□□ 1.12
GARNL3-208ENST00000444677 WDR7Q9Y4E6 1490 aa22.05■■□□□ 1.12
GARNL3-208ENST00000444677 MAP3K4Q9Y6R4 1608 aa22.05■■□□□ 1.12
GARNL3-208ENST00000444677 NUP153P49790 1475 aaKnown RBP22.04■■□□□ 1.12
GARNL3-208ENST00000444677 RAPGEF6Q8TEU7 1601 aa22.02■■□□□ 1.12
GARNL3-208ENST00000444677 ATP1B4Q9UN42 357 aaPredicted RBP22■■□□□ 1.11
GARNL3-208ENST00000444677 LOC105371045A0A1W2PR82 267 aa21.99■■□□□ 1.11
GARNL3-208ENST00000444677 FMN1Q68DA7 1419 aa21.94■■□□□ 1.1
GARNL3-208ENST00000444677 CLIP1P30622 1438 aa21.93■■□□□ 1.1
GARNL3-208ENST00000444677 AEBP2Q6ZN18 517 aaPredicted RBP21.93■■□□□ 1.1
GARNL3-208ENST00000444677 CFAP43Q8NDM7 1665 aa21.93■■□□□ 1.1
GARNL3-208ENST00000444677 CD109Q6YHK3 1445 aa21.91■■□□□ 1.1
GARNL3-208ENST00000444677 PLEKHD1A6NEE1 506 aa21.91■■□□□ 1.1
GARNL3-208ENST00000444677 CDK13Q14004 1512 aaKnown RBP21.9■■□□□ 1.1
GARNL3-208ENST00000444677 TEX14Q8IWB6 1497 aa21.89■■□□□ 1.09
GARNL3-208ENST00000444677 COL17A1Q9UMD9 1497 aaPredicted RBP21.86■■□□□ 1.09
GARNL3-208ENST00000444677 MAGI3Q5TCQ9 1506 aa21.81■■□□□ 1.08
GARNL3-208ENST00000444677 CEP162Q5TB80 1403 aa21.8■■□□□ 1.08
GARNL3-208ENST00000444677 CASKIN1Q8WXD9 1431 aa21.8■■□□□ 1.08
GARNL3-208ENST00000444677 HECW1Q76N89 1606 aa21.79■■□□□ 1.08
GARNL3-208ENST00000444677 ABCA9Q8IUA7 1624 aa21.77■■□□□ 1.07
GARNL3-208ENST00000444677 CDK11AQ9UQ88 783 aaPredicted RBP21.75■■□□□ 1.07
GARNL3-208ENST00000444677 PCF11O94913 1555 aaKnown RBP21.74■■□□□ 1.07
GARNL3-208ENST00000444677 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.71■■□□□ 1.07
GARNL3-208ENST00000444677 TROQ12816 1431 aaPredicted RBP21.69■■□□□ 1.06
GARNL3-208ENST00000444677 FYCO1Q9BQS8 1478 aa21.68■■□□□ 1.06
GARNL3-208ENST00000444677 RAPGEF3O95398 923 aa21.66■■□□□ 1.06
GARNL3-208ENST00000444677 TTC37Q6PGP7 1564 aa21.65■■□□□ 1.06
GARNL3-208ENST00000444677 CCDC18Q5T9S5 1454 aa21.64■■□□□ 1.06
GARNL3-208ENST00000444677 LRRIQ1Q96JM4 1722 aa21.64■■□□□ 1.06
GARNL3-208ENST00000444677 ADGRL1O94910 1474 aa21.64■■□□□ 1.05
GARNL3-208ENST00000444677 KDM4FA0A1W2PPD8 638 aa21.63■■□□□ 1.05
GARNL3-208ENST00000444677 NEO1Q92859 1461 aa21.63■■□□□ 1.05
GARNL3-208ENST00000444677 ARAP3Q8WWN8 1544 aa21.62■■□□□ 1.05
GARNL3-208ENST00000444677 PLCH2O75038 1416 aa21.62■■□□□ 1.05
GARNL3-208ENST00000444677 PHLDB1Q86UU1 1377 aa21.61■■□□□ 1.05
GARNL3-208ENST00000444677 AKNAQ7Z591 1439 aa21.61■■□□□ 1.05
GARNL3-208ENST00000444677 KIF14Q15058 1648 aa21.6■■□□□ 1.05
GARNL3-208ENST00000444677 FANCAO15360 1455 aa21.59■■□□□ 1.05
GARNL3-208ENST00000444677 EFCAB2Q5VUJ9 269 aa21.56■■□□□ 1.04
GARNL3-208ENST00000444677 CFAP74Q9C0B2 1584 aa21.56■■□□□ 1.04
GARNL3-208ENST00000444677 FRMPD1Q5SYB0 1578 aa21.55■■□□□ 1.04
GARNL3-208ENST00000444677 VPS8Q8N3P4 1428 aa21.53■■□□□ 1.04
GARNL3-208ENST00000444677 DENND4BO75064 1496 aaPredicted RBP21.52■■□□□ 1.04
GARNL3-208ENST00000444677 MTUS2Q5JR59 1369 aa21.51■■□□□ 1.03
GARNL3-208ENST00000444677 SCAPERQ9BY12 1400 aa21.51■■□□□ 1.03
GARNL3-208ENST00000444677 RICTORQ6R327 1708 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms