RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 RUSC2Q8N2Y8 1516 aa40.94■■■■■ 4.14
TMEM238-201ENST00000444469 IGF1RP08069 1367 aa40.94■■■■■ 4.14
TMEM238-201ENST00000444469 KIAA0586Q9BVV6 1533 aa40.79■■■■■ 4.12
TMEM238-201ENST00000444469 CARMIL1Q5VZK9 1371 aa40.75■■■■■ 4.11
TMEM238-201ENST00000444469 NPM1P06748 294 aaKnown RBP eCLIP40.66■■■■■ 4.1
TMEM238-201ENST00000444469 CARMIL2Q6F5E8 1435 aa40.49■■■■■ 4.07
TMEM238-201ENST00000444469 IQGAP2Q13576 1575 aa40.45■■■■■ 4.07
TMEM238-201ENST00000444469 ADCY10Q96PN6 1610 aa40.43■■■■■ 4.06
TMEM238-201ENST00000444469 TTBK1Q5TCY1 1321 aaPredicted RBP40.42■■■■■ 4.06
TMEM238-201ENST00000444469 RAPGEF2Q9Y4G8 1499 aa40.42■■■■■ 4.06
TMEM238-201ENST00000444469 PTPRGP23470 1445 aa40.42■■■■■ 4.06
TMEM238-201ENST00000444469 MAPKBP1O60336 1514 aa40.37■■■■■ 4.05
TMEM238-201ENST00000444469 TNIKQ9UKE5 1360 aa40.36■■■■■ 4.05
TMEM238-201ENST00000444469 KIF13AQ9H1H9 1805 aa40.36■■■■■ 4.05
TMEM238-201ENST00000444469 FAM69CQ0P6D2 419 aa40.34■■■■■ 4.05
TMEM238-201ENST00000444469 ABCC10Q5T3U5 1492 aa40.32■■■■■ 4.04
TMEM238-201ENST00000444469 DIP2BQ9P265 1576 aa40.2■■■■■ 4.03
TMEM238-201ENST00000444469 DISP1Q96F81 1524 aa40.16■■■■■ 4.02
TMEM238-201ENST00000444469 UGGT2Q9NYU1 1516 aa40.16■■■■■ 4.02
TMEM238-201ENST00000444469 AEBP2Q6ZN18 517 aaPredicted RBP40.14■■■■■ 4.02
TMEM238-201ENST00000444469 ABCC2Q92887 1545 aa40.13■■■■■ 4.01
TMEM238-201ENST00000444469 UACAQ9BZF9 1416 aa40.09■■■■■ 4.01
TMEM238-201ENST00000444469 UHRF1BP1LA0JNW5 1464 aa40.07■■■■■ 4
TMEM238-201ENST00000444469 CTTNBP2Q8WZ74 1663 aa40.06■■■■■ 4
TMEM238-201ENST00000444469 KIAA0556O60303 1618 aa40.05■■■■■ 4
TMEM238-201ENST00000444469 PLB1Q6P1J6 1458 aa40■■■■□ 3.99
TMEM238-201ENST00000444469 PRXQ9BXM0 1461 aa39.98■■■■□ 3.99
TMEM238-201ENST00000444469 ASXL2Q76L83 1435 aa39.98■■■■□ 3.99
TMEM238-201ENST00000444469 GOLGA3Q08378 1498 aa39.97■■■■□ 3.99
TMEM238-201ENST00000444469 TSPOAP1O95153 1857 aa39.92■■■■□ 3.98
TMEM238-201ENST00000444469 KDM6BO15054 1643 aa39.88■■■■□ 3.97
TMEM238-201ENST00000444469 KDM5BQ9UGL1 1544 aa39.86■■■■□ 3.97
TMEM238-201ENST00000444469 FAM9AQ8IZU1 332 aaPredicted RBP39.84■■■■□ 3.97
TMEM238-201ENST00000444469 CSRNP3Q8WYN3 585 aa39.82■■■■□ 3.97
TMEM238-201ENST00000444469 GLI2P10070 1586 aa39.8■■■■□ 3.96
TMEM238-201ENST00000444469 ZCCHC11Q5TAX3 1644 aaKnown RBP39.8■■■■□ 3.96
TMEM238-201ENST00000444469 EEA1Q15075 1411 aa39.73■■■■□ 3.95
TMEM238-201ENST00000444469 EPRSP07814 1512 aaKnown RBP39.71■■■■□ 3.95
TMEM238-201ENST00000444469 ABCA8O94911 1581 aa39.64■■■■□ 3.94
TMEM238-201ENST00000444469 WDR7Q9Y4E6 1490 aa39.64■■■■□ 3.94
TMEM238-201ENST00000444469 P3H3Q8IVL6 736 aa39.61■■■■□ 3.93
TMEM238-201ENST00000444469 TEX14Q8IWB6 1497 aa39.6■■■■□ 3.93
TMEM238-201ENST00000444469 MAP3K4Q9Y6R4 1608 aa39.58■■■■□ 3.93
TMEM238-201ENST00000444469 PPRC1Q5VV67 1664 aaKnown RBP39.58■■■■□ 3.93
TMEM238-201ENST00000444469 KCNH8Q96L42 1107 aa39.5■■■■□ 3.91
TMEM238-201ENST00000444469 RANGAP1P46060 587 aaPredicted RBP39.45■■■■□ 3.91
TMEM238-201ENST00000444469 SAMD9Q5K651 1589 aa39.45■■■■□ 3.91
TMEM238-201ENST00000444469 ARID3CA6NKF2 412 aa39.43■■■■□ 3.9
TMEM238-201ENST00000444469 CD109Q6YHK3 1445 aa39.4■■■■□ 3.9
TMEM238-201ENST00000444469 CFAP43Q8NDM7 1665 aa39.38■■■■□ 3.89
TMEM238-201ENST00000444469 KIF21BO75037 1637 aa39.32■■■■□ 3.89
TMEM238-201ENST00000444469 ATP10BO94823 1461 aa39.32■■■■□ 3.89
TMEM238-201ENST00000444469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.32■■■■□ 3.89
TMEM238-201ENST00000444469 HNRNPUL2Q1KMD3 747 aaKnown RBP39.32■■■■□ 3.89
TMEM238-201ENST00000444469 RAPGEF6Q8TEU7 1601 aa39.32■■■■□ 3.88
TMEM238-201ENST00000444469 MAGI3Q5TCQ9 1506 aa39.31■■■■□ 3.88
TMEM238-201ENST00000444469 COL17A1Q9UMD9 1497 aaPredicted RBP39.3■■■■□ 3.88
TMEM238-201ENST00000444469 KDM4FA0A1W2PPD8 638 aa39.26■■■■□ 3.88
TMEM238-201ENST00000444469 FHOD3Q2V2M9 1422 aa39.25■■■■□ 3.87
TMEM238-201ENST00000444469 CHIC1Q5VXU3 224 aa39.21■■■■□ 3.87
TMEM238-201ENST00000444469 EFCAB5A4FU69 1503 aa39.19■■■■□ 3.86
TMEM238-201ENST00000444469 UBTFP17480 764 aaKnown RBP39.16■■■■□ 3.86
TMEM238-201ENST00000444469 EHMT2Q96KQ7 1210 aa39.16■■■■□ 3.86
TMEM238-201ENST00000444469 NUP153P49790 1475 aaKnown RBP39.12■■■■□ 3.85
TMEM238-201ENST00000444469 ADGRL1O94910 1474 aa39.1■■■■□ 3.85
TMEM238-201ENST00000444469 ABCA9Q8IUA7 1624 aa39.08■■■■□ 3.85
TMEM238-201ENST00000444469 PLEKHD1A6NEE1 506 aa39.04■■■■□ 3.84
TMEM238-201ENST00000444469 PHLDB1Q86UU1 1377 aa39.01■■■■□ 3.84
TMEM238-201ENST00000444469 ARAP3Q8WWN8 1544 aa38.99■■■■□ 3.83
TMEM238-201ENST00000444469 NEO1Q92859 1461 aa38.92■■■■□ 3.82
TMEM238-201ENST00000444469 ATP1B4Q9UN42 357 aaPredicted RBP38.89■■■■□ 3.82
TMEM238-201ENST00000444469 FMN1Q68DA7 1419 aa38.88■■■■□ 3.81
TMEM238-201ENST00000444469 ARHGAP35Q9NRY4 1499 aa38.79■■■■□ 3.8
TMEM238-201ENST00000444469 CDK13Q14004 1512 aaKnown RBP38.79■■■■□ 3.8
TMEM238-201ENST00000444469 RAPGEF3O95398 923 aa38.79■■■■□ 3.8
TMEM238-201ENST00000444469 HECW1Q76N89 1606 aa38.78■■■■□ 3.8
TMEM238-201ENST00000444469 CFAP74Q9C0B2 1584 aa38.74■■■■□ 3.79
TMEM238-201ENST00000444469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.73■■■■□ 3.79
TMEM238-201ENST00000444469 CDK11AQ9UQ88 783 aaPredicted RBP38.72■■■■□ 3.79
TMEM238-201ENST00000444469 FANCAO15360 1455 aa38.71■■■■□ 3.79
TMEM238-201ENST00000444469 TTC37Q6PGP7 1564 aa38.67■■■■□ 3.78
TMEM238-201ENST00000444469 AKNAQ7Z591 1439 aa38.67■■■■□ 3.78
TMEM238-201ENST00000444469 DENND4BO75064 1496 aaPredicted RBP38.66■■■■□ 3.78
TMEM238-201ENST00000444469 FRMPD1Q5SYB0 1578 aa38.61■■■■□ 3.77
TMEM238-201ENST00000444469 ARID4BQ4LE39 1312 aaPredicted RBP38.59■■■■□ 3.77
TMEM238-201ENST00000444469 CLIP1P30622 1438 aa38.55■■■■□ 3.76
TMEM238-201ENST00000444469 PLCH2O75038 1416 aa38.53■■■■□ 3.76
TMEM238-201ENST00000444469 RICTORQ6R327 1708 aa38.52■■■■□ 3.76
TMEM238-201ENST00000444469 KIF14Q15058 1648 aa38.51■■■■□ 3.76
TMEM238-201ENST00000444469 ARHGEF40Q8TER5 1519 aa38.49■■■■□ 3.75
TMEM238-201ENST00000444469 TROQ12816 1431 aaPredicted RBP38.48■■■■□ 3.75
TMEM238-201ENST00000444469 EFCAB2Q5VUJ9 269 aa38.47■■■■□ 3.75
TMEM238-201ENST00000444469 HECW2Q9P2P5 1572 aa38.47■■■■□ 3.75
TMEM238-201ENST00000444469 MYO5CQ9NQX4 1742 aa38.46■■■■□ 3.75
TMEM238-201ENST00000444469 SCAPERQ9BY12 1400 aa38.44■■■■□ 3.74
TMEM238-201ENST00000444469 CCDC18Q5T9S5 1454 aa38.42■■■■□ 3.74
TMEM238-201ENST00000444469 CASKIN1Q8WXD9 1431 aa38.42■■■■□ 3.74
TMEM238-201ENST00000444469 ZMYM4Q5VZL5 1548 aa38.41■■■■□ 3.74
TMEM238-201ENST00000444469 PCF11O94913 1555 aaKnown RBP38.4■■■■□ 3.74
TMEM238-201ENST00000444469 ADAMTSL3P82987 1691 aa38.4■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms