RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 TRHP20396 242 aaPredicted RBP28.4■■■□□ 2.14
TSPAN9-204ENST00000444315 PRG4Q92954 1404 aaPredicted RBP28.37■■■□□ 2.13
TSPAN9-204ENST00000444315 JPH4Q96JJ6 628 aa28.36■■■□□ 2.13
TSPAN9-204ENST00000444315 KIAA0586Q9BVV6 1533 aa28.3■■■□□ 2.12
TSPAN9-204ENST00000444315 RAPGEF2Q9Y4G8 1499 aa28.24■■■□□ 2.11
TSPAN9-204ENST00000444315 IQGAP2Q13576 1575 aa28.2■■■□□ 2.1
TSPAN9-204ENST00000444315 TTBK1Q5TCY1 1321 aaPredicted RBP28.18■■■□□ 2.1
TSPAN9-204ENST00000444315 CARMIL2Q6F5E8 1435 aa28.13■■■□□ 2.09
TSPAN9-204ENST00000444315 NPM1P06748 294 aaKnown RBP eCLIP28.09■■■□□ 2.09
TSPAN9-204ENST00000444315 CTTNBP2Q8WZ74 1663 aa28.09■■■□□ 2.09
TSPAN9-204ENST00000444315 PTPRGP23470 1445 aa28.01■■■□□ 2.07
TSPAN9-204ENST00000444315 FAM9AQ8IZU1 332 aaPredicted RBP27.99■■■□□ 2.07
TSPAN9-204ENST00000444315 TNIKQ9UKE5 1360 aa27.99■■■□□ 2.07
TSPAN9-204ENST00000444315 CSRNP3Q8WYN3 585 aa27.97■■■□□ 2.07
TSPAN9-204ENST00000444315 PRXQ9BXM0 1461 aa27.96■■■□□ 2.07
TSPAN9-204ENST00000444315 EEA1Q15075 1411 aa27.96■■■□□ 2.07
TSPAN9-204ENST00000444315 ADCY10Q96PN6 1610 aa27.96■■■□□ 2.07
TSPAN9-204ENST00000444315 UGGT2Q9NYU1 1516 aa27.93■■■□□ 2.06
TSPAN9-204ENST00000444315 KIAA0556O60303 1618 aa27.91■■■□□ 2.06
TSPAN9-204ENST00000444315 DISP1Q96F81 1524 aa27.89■■■□□ 2.06
TSPAN9-204ENST00000444315 GOLGA3Q08378 1498 aa27.87■■■□□ 2.05
TSPAN9-204ENST00000444315 CHIC1Q5VXU3 224 aa27.86■■■□□ 2.05
TSPAN9-204ENST00000444315 KIF13AQ9H1H9 1805 aa27.81■■■□□ 2.04
TSPAN9-204ENST00000444315 MAPKBP1O60336 1514 aa27.8■■■□□ 2.04
TSPAN9-204ENST00000444315 UACAQ9BZF9 1416 aa27.79■■■□□ 2.04
TSPAN9-204ENST00000444315 FAM69CQ0P6D2 419 aa27.77■■■□□ 2.04
TSPAN9-204ENST00000444315 RANGAP1P46060 587 aaPredicted RBP27.76■■■□□ 2.03
TSPAN9-204ENST00000444315 ABCC2Q92887 1545 aa27.76■■■□□ 2.03
TSPAN9-204ENST00000444315 EHMT2Q96KQ7 1210 aa27.75■■■□□ 2.03
TSPAN9-204ENST00000444315 UHRF1BP1LA0JNW5 1464 aa27.71■■■□□ 2.03
TSPAN9-204ENST00000444315 P3H3Q8IVL6 736 aa27.71■■■□□ 2.03
TSPAN9-204ENST00000444315 KIF21BO75037 1637 aa27.7■■■□□ 2.03
TSPAN9-204ENST00000444315 ABCC10Q5T3U5 1492 aa27.7■■■□□ 2.03
TSPAN9-204ENST00000444315 DIP2BQ9P265 1576 aa27.7■■■□□ 2.03
TSPAN9-204ENST00000444315 TSPOAP1O95153 1857 aa27.66■■■□□ 2.02
TSPAN9-204ENST00000444315 ZCCHC11Q5TAX3 1644 aaKnown RBP27.64■■■□□ 2.02
TSPAN9-204ENST00000444315 ASXL2Q76L83 1435 aa27.64■■■□□ 2.02
TSPAN9-204ENST00000444315 PLB1Q6P1J6 1458 aa27.63■■■□□ 2.01
TSPAN9-204ENST00000444315 UBTFP17480 764 aaKnown RBP27.62■■■□□ 2.01
TSPAN9-204ENST00000444315 KDM5BQ9UGL1 1544 aa27.58■■■□□ 2.01
TSPAN9-204ENST00000444315 SAMD9Q5K651 1589 aa27.58■■■□□ 2.01
TSPAN9-204ENST00000444315 ABCA8O94911 1581 aa27.56■■■□□ 2
TSPAN9-204ENST00000444315 ARID3CA6NKF2 412 aa27.53■■■□□ 2
TSPAN9-204ENST00000444315 FHOD3Q2V2M9 1422 aa27.48■■□□□ 1.99
TSPAN9-204ENST00000444315 EFCAB5A4FU69 1503 aa27.47■■□□□ 1.99
TSPAN9-204ENST00000444315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.47■■□□□ 1.99
TSPAN9-204ENST00000444315 HNRNPUL2Q1KMD3 747 aaKnown RBP27.47■■□□□ 1.99
TSPAN9-204ENST00000444315 WDR7Q9Y4E6 1490 aa27.46■■□□□ 1.99
TSPAN9-204ENST00000444315 RAPGEF6Q8TEU7 1601 aa27.46■■□□□ 1.99
TSPAN9-204ENST00000444315 GLI2P10070 1586 aa27.44■■□□□ 1.98
TSPAN9-204ENST00000444315 EPRSP07814 1512 aaKnown RBP27.44■■□□□ 1.98
TSPAN9-204ENST00000444315 KDM6BO15054 1643 aa27.43■■□□□ 1.98
TSPAN9-204ENST00000444315 KCNH8Q96L42 1107 aa27.42■■□□□ 1.98
TSPAN9-204ENST00000444315 MAP3K4Q9Y6R4 1608 aa27.35■■□□□ 1.97
TSPAN9-204ENST00000444315 TEX14Q8IWB6 1497 aa27.33■■□□□ 1.97
TSPAN9-204ENST00000444315 ATP1B4Q9UN42 357 aaPredicted RBP27.32■■□□□ 1.96
TSPAN9-204ENST00000444315 ATP10BO94823 1461 aa27.32■■□□□ 1.96
TSPAN9-204ENST00000444315 PPRC1Q5VV67 1664 aaKnown RBP27.31■■□□□ 1.96
TSPAN9-204ENST00000444315 CFAP43Q8NDM7 1665 aa27.3■■□□□ 1.96
TSPAN9-204ENST00000444315 NUP153P49790 1475 aaKnown RBP27.25■■□□□ 1.95
TSPAN9-204ENST00000444315 CD109Q6YHK3 1445 aa27.25■■□□□ 1.95
TSPAN9-204ENST00000444315 AEBP2Q6ZN18 517 aaPredicted RBP27.23■■□□□ 1.95
TSPAN9-204ENST00000444315 FMN1Q68DA7 1419 aa27.23■■□□□ 1.95
TSPAN9-204ENST00000444315 ARHGAP35Q9NRY4 1499 aa27.22■■□□□ 1.95
TSPAN9-204ENST00000444315 HECW1Q76N89 1606 aa27.19■■□□□ 1.94
TSPAN9-204ENST00000444315 PLEKHD1A6NEE1 506 aa27.18■■□□□ 1.94
TSPAN9-204ENST00000444315 MAGI3Q5TCQ9 1506 aa27.13■■□□□ 1.93
TSPAN9-204ENST00000444315 CDK13Q14004 1512 aaKnown RBP27.12■■□□□ 1.93
TSPAN9-204ENST00000444315 ABCA9Q8IUA7 1624 aa27.12■■□□□ 1.93
TSPAN9-204ENST00000444315 CLIP1P30622 1438 aa27.06■■□□□ 1.92
TSPAN9-204ENST00000444315 CDK11AQ9UQ88 783 aaPredicted RBP27.05■■□□□ 1.92
TSPAN9-204ENST00000444315 COL17A1Q9UMD9 1497 aaPredicted RBP27■■□□□ 1.91
TSPAN9-204ENST00000444315 PCF11O94913 1555 aaKnown RBP27■■□□□ 1.91
TSPAN9-204ENST00000444315 TTC37Q6PGP7 1564 aa26.95■■□□□ 1.9
TSPAN9-204ENST00000444315 CFAP74Q9C0B2 1584 aa26.95■■□□□ 1.9
TSPAN9-204ENST00000444315 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.95■■□□□ 1.9
TSPAN9-204ENST00000444315 CCDC18Q5T9S5 1454 aa26.93■■□□□ 1.9
TSPAN9-204ENST00000444315 CASKIN1Q8WXD9 1431 aa26.93■■□□□ 1.9
TSPAN9-204ENST00000444315 KIF14Q15058 1648 aa26.93■■□□□ 1.9
TSPAN9-204ENST00000444315 PHLDB1Q86UU1 1377 aa26.93■■□□□ 1.9
TSPAN9-204ENST00000444315 LRRIQ1Q96JM4 1722 aa26.93■■□□□ 1.9
TSPAN9-204ENST00000444315 NEO1Q92859 1461 aa26.93■■□□□ 1.9
TSPAN9-204ENST00000444315 FYCO1Q9BQS8 1478 aa26.9■■□□□ 1.9
TSPAN9-204ENST00000444315 ARAP3Q8WWN8 1544 aa26.89■■□□□ 1.89
TSPAN9-204ENST00000444315 MYO5CQ9NQX4 1742 aa26.87■■□□□ 1.89
TSPAN9-204ENST00000444315 FANCAO15360 1455 aa26.87■■□□□ 1.89
TSPAN9-204ENST00000444315 TROQ12816 1431 aaPredicted RBP26.86■■□□□ 1.89
TSPAN9-204ENST00000444315 CEP162Q5TB80 1403 aa26.86■■□□□ 1.89
TSPAN9-204ENST00000444315 RAPGEF3O95398 923 aa26.82■■□□□ 1.88
TSPAN9-204ENST00000444315 AKNAQ7Z591 1439 aa26.82■■□□□ 1.88
TSPAN9-204ENST00000444315 ADGRL1O94910 1474 aa26.8■■□□□ 1.88
TSPAN9-204ENST00000444315 DENND4BO75064 1496 aaPredicted RBP26.79■■□□□ 1.88
TSPAN9-204ENST00000444315 LOC105371045A0A1W2PR82 267 aa26.78■■□□□ 1.88
TSPAN9-204ENST00000444315 ARHGAP5Q13017 1502 aa26.77■■□□□ 1.88
TSPAN9-204ENST00000444315 PLCH2O75038 1416 aa26.75■■□□□ 1.87
TSPAN9-204ENST00000444315 KDM4FA0A1W2PPD8 638 aa26.75■■□□□ 1.87
TSPAN9-204ENST00000444315 EFCAB2Q5VUJ9 269 aa26.74■■□□□ 1.87
TSPAN9-204ENST00000444315 FRMPD1Q5SYB0 1578 aa26.72■■□□□ 1.87
TSPAN9-204ENST00000444315 RICTORQ6R327 1708 aa26.71■■□□□ 1.87
TSPAN9-204ENST00000444315 ARID4BQ4LE39 1312 aaPredicted RBP26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms