RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 FHAD1B1AJZ9 1412 aa20.07■□□□□ 0.8
SMARCA4-204ENST00000444061 OSCARQ8IYS5 282 aa20.07■□□□□ 0.8
SMARCA4-204ENST00000444061 CNGB1Q14028 1251 aaPredicted RBP20.07■□□□□ 0.8
SMARCA4-204ENST00000444061 FGD5Q6ZNL6 1462 aa20.06■□□□□ 0.8
SMARCA4-204ENST00000444061 JPH4Q96JJ6 628 aa20.04■□□□□ 0.8
SMARCA4-204ENST00000444061 RAPGEF2Q9Y4G8 1499 aa20.03■□□□□ 0.8
SMARCA4-204ENST00000444061 HRCP23327 699 aa20.02■□□□□ 0.8
SMARCA4-204ENST00000444061 RAD54L2Q9Y4B4 1467 aa19.99■□□□□ 0.79
SMARCA4-204ENST00000444061 GAPVD1Q14C86 1478 aa19.98■□□□□ 0.79
SMARCA4-204ENST00000444061 MRC2Q9UBG0 1479 aa19.98■□□□□ 0.79
SMARCA4-204ENST00000444061 ARID4BQ4LE39 1312 aaPredicted RBP19.98■□□□□ 0.79
SMARCA4-204ENST00000444061 UNC13AQ9UPW8 1703 aa19.95■□□□□ 0.78
SMARCA4-204ENST00000444061 RRP7BPQ9NSQ0 103 aa19.94■□□□□ 0.78
SMARCA4-204ENST00000444061 CCNB3Q8WWL7 1395 aa19.92■□□□□ 0.78
SMARCA4-204ENST00000444061 AQRO60306 1485 aaKnown RBP eCLIP19.91■□□□□ 0.782e-7■■■■□ 24.9
SMARCA4-204ENST00000444061 FMN1Q68DA7 1419 aa19.89■□□□□ 0.77
SMARCA4-204ENST00000444061 CYB5RLQ6IPT4 315 aa19.88■□□□□ 0.77
SMARCA4-204ENST00000444061 YTHDC1Q96MU7 727 aaKnown RBP19.87■□□□□ 0.77
SMARCA4-204ENST00000444061 IGF1RP08069 1367 aa19.85■□□□□ 0.77
SMARCA4-204ENST00000444061 RUSC2Q8N2Y8 1516 aa19.82■□□□□ 0.76
SMARCA4-204ENST00000444061 TONSLQ96HA7 1378 aa19.82■□□□□ 0.76
SMARCA4-204ENST00000444061 IFT140Q96RY7 1462 aa19.81■□□□□ 0.76
SMARCA4-204ENST00000444061 LAMC3Q9Y6N6 1575 aa19.8■□□□□ 0.76
SMARCA4-204ENST00000444061 TOPBP1Q92547 1522 aa19.8■□□□□ 0.76
SMARCA4-204ENST00000444061 GRIN2BQ13224 1484 aa19.8■□□□□ 0.76
SMARCA4-204ENST00000444061 PTPRGP23470 1445 aa19.8■□□□□ 0.76
SMARCA4-204ENST00000444061 FHOD3Q2V2M9 1422 aa19.79■□□□□ 0.76
SMARCA4-204ENST00000444061 VPS8Q8N3P4 1428 aa19.79■□□□□ 0.76
SMARCA4-204ENST00000444061 EFCAB2Q5VUJ9 269 aa19.76■□□□□ 0.75
SMARCA4-204ENST00000444061 ACIN1Q9UKV3 1341 aaKnown RBP19.76■□□□□ 0.75
SMARCA4-204ENST00000444061 PEG3Q9GZU2 1588 aa19.72■□□□□ 0.75
SMARCA4-204ENST00000444061 NEFLP07196 543 aa19.72■□□□□ 0.75
SMARCA4-204ENST00000444061 POLA1P09884 1462 aaPredicted RBP19.72■□□□□ 0.75
SMARCA4-204ENST00000444061 PPP1R15AO75807 674 aaPredicted RBP19.7■□□□□ 0.74
SMARCA4-204ENST00000444061 KDM2AQ9Y2K7 1162 aa19.68■□□□□ 0.74
SMARCA4-204ENST00000444061 MLECQ14165 292 aa19.67■□□□□ 0.74
SMARCA4-204ENST00000444061 ERICH6Q7L0X2 663 aa19.67■□□□□ 0.74
SMARCA4-204ENST00000444061 DNMBPQ6XZF7 1577 aa19.67■□□□□ 0.74
SMARCA4-204ENST00000444061 CUX1P39880 1505 aa19.65■□□□□ 0.74
SMARCA4-204ENST00000444061 KANK4Q5T7N3 995 aaPredicted RBP19.64■□□□□ 0.73
SMARCA4-204ENST00000444061 ARHGAP35Q9NRY4 1499 aa19.63■□□□□ 0.73
SMARCA4-204ENST00000444061 SYNJ1O43426 1573 aa19.63■□□□□ 0.73
SMARCA4-204ENST00000444061 DIEXFQ68CQ4 756 aaKnown RBP19.61■□□□□ 0.73
SMARCA4-204ENST00000444061 RGL3Q3MIN7 710 aa19.58■□□□□ 0.73
SMARCA4-204ENST00000444061 SENP3Q9H4L4 574 aaPredicted RBP19.58■□□□□ 0.73
SMARCA4-204ENST00000444061 GGT6Q6P531 493 aa19.57■□□□□ 0.72
SMARCA4-204ENST00000444061 TOP2BQ02880 1626 aa19.57■□□□□ 0.72
SMARCA4-204ENST00000444061 KANK1Q14678 1352 aa19.57■□□□□ 0.72
SMARCA4-204ENST00000444061 CCDC18Q5T9S5 1454 aa19.57■□□□□ 0.72
SMARCA4-204ENST00000444061 ANP32CO43423 234 aa19.56■□□□□ 0.72
SMARCA4-204ENST00000444061 SNAPC4Q5SXM2 1469 aa19.56■□□□□ 0.72
SMARCA4-204ENST00000444061 ZNF316A6NFI3 1004 aaPredicted RBP19.52■□□□□ 0.72
SMARCA4-204ENST00000444061 PRG4Q92954 1404 aaPredicted RBP19.51■□□□□ 0.71
SMARCA4-204ENST00000444061 HNRNPMP52272 730 aaKnown RBP eCLIP19.5■□□□□ 0.715e-6■■□□□ 11.8
SMARCA4-204ENST00000444061 RSPH4AQ5TD94 716 aa19.5■□□□□ 0.71
SMARCA4-204ENST00000444061 C14orf37Q86TY3 774 aa19.49■□□□□ 0.71
SMARCA4-204ENST00000444061 FAM69CQ0P6D2 419 aa19.49■□□□□ 0.71
SMARCA4-204ENST00000444061 SPAG9O60271 1321 aaKnown RBP19.48■□□□□ 0.71
SMARCA4-204ENST00000444061 NEFMP07197 916 aa19.47■□□□□ 0.71
SMARCA4-204ENST00000444061 URB2Q14146 1524 aaKnown RBP19.46■□□□□ 0.71
SMARCA4-204ENST00000444061 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
SMARCA4-204ENST00000444061 ANKRD30AQ9BXX3 1397 aa19.43■□□□□ 0.7
SMARCA4-204ENST00000444061 KIF3BO15066 747 aa19.42■□□□□ 0.7
SMARCA4-204ENST00000444061 HDGFP51858 240 aaKnown RBP19.39■□□□□ 0.69
SMARCA4-204ENST00000444061 ERICH3Q5RHP9 1530 aa19.37■□□□□ 0.69
SMARCA4-204ENST00000444061 SLC24A1O60721 1099 aa19.35■□□□□ 0.69
SMARCA4-204ENST00000444061 PRXQ9BXM0 1461 aa19.35■□□□□ 0.69
SMARCA4-204ENST00000444061 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
SMARCA4-204ENST00000444061 EIF4G2P78344 907 aaKnown RBP eCLIP19.33■□□□□ 0.69
SMARCA4-204ENST00000444061 MAGI1Q96QZ7 1491 aaPredicted RBP19.33■□□□□ 0.68
SMARCA4-204ENST00000444061 PKD2Q13563 968 aa19.32■□□□□ 0.68
SMARCA4-204ENST00000444061 ZNF608Q9ULD9 1512 aaPredicted RBP19.32■□□□□ 0.68
SMARCA4-204ENST00000444061 SETD5Q9C0A6 1442 aa19.32■□□□□ 0.68
SMARCA4-204ENST00000444061 NUP155O75694 1391 aa19.32■□□□□ 0.68
SMARCA4-204ENST00000444061 SCAF1Q9H7N4 1312 aaKnown RBP19.32■□□□□ 0.68
SMARCA4-204ENST00000444061 KIAA0586Q9BVV6 1533 aa19.32■□□□□ 0.68
SMARCA4-204ENST00000444061 KIF21BO75037 1637 aa19.3■□□□□ 0.68
SMARCA4-204ENST00000444061 PRDM2Q13029 1718 aa19.3■□□□□ 0.68
SMARCA4-204ENST00000444061 WASHC2CQ9Y4E1 1318 aa19.3■□□□□ 0.68
SMARCA4-204ENST00000444061 SIN3AQ96ST3 1273 aa19.28■□□□□ 0.68
SMARCA4-204ENST00000444061 POGKQ9P215 609 aa19.27■□□□□ 0.68
SMARCA4-204ENST00000444061 DDX10Q13206 875 aaKnown RBP19.27■□□□□ 0.67
SMARCA4-204ENST00000444061 CARD11Q9BXL7 1154 aa19.26■□□□□ 0.67
SMARCA4-204ENST00000444061 TMC1Q8TDI8 760 aa19.25■□□□□ 0.67
SMARCA4-204ENST00000444061 GRIN2AQ12879 1464 aa19.24■□□□□ 0.67
SMARCA4-204ENST00000444061 DCAF11Q8TEB1 546 aa19.24■□□□□ 0.67
SMARCA4-204ENST00000444061 CASKIN1Q8WXD9 1431 aa19.23■□□□□ 0.67
SMARCA4-204ENST00000444061 HIRIP3Q9BW71 556 aaPredicted RBP19.22■□□□□ 0.67
SMARCA4-204ENST00000444061 CDCA8Q53HL2 280 aa19.21■□□□□ 0.67
SMARCA4-204ENST00000444061 PLEKHG5O94827 1062 aa19.21■□□□□ 0.67
SMARCA4-204ENST00000444061 MPHOSPH9Q99550 1183 aa19.21■□□□□ 0.67
SMARCA4-204ENST00000444061 EFCAB5A4FU69 1503 aa19.2■□□□□ 0.66
SMARCA4-204ENST00000444061 CLSPNQ9HAW4 1339 aa19.19■□□□□ 0.66
SMARCA4-204ENST00000444061 FOXD1Q16676 465 aa19.19■□□□□ 0.66
SMARCA4-204ENST00000444061 RAB3GAP2Q9H2M9 1393 aa19.17■□□□□ 0.66
SMARCA4-204ENST00000444061 HAP1P54257 671 aaPredicted RBP19.16■□□□□ 0.66
SMARCA4-204ENST00000444061 UACAQ9BZF9 1416 aa19.15■□□□□ 0.66
SMARCA4-204ENST00000444061 CUL7Q14999 1698 aa19.15■□□□□ 0.66
SMARCA4-204ENST00000444061 ARAP1Q96P48 1450 aa19.15■□□□□ 0.66
SMARCA4-204ENST00000444061 IQGAP2Q13576 1575 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms