RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 IGF1RP08069 1367 aa34.81■■■■□ 3.16
EDEM1-203ENST00000443790 CUL7Q14999 1698 aa34.8■■■■□ 3.16
EDEM1-203ENST00000443790 KIAA0586Q9BVV6 1533 aa34.73■■■■□ 3.15
EDEM1-203ENST00000443790 KIF13AQ9H1H9 1805 aa34.64■■■■□ 3.14
EDEM1-203ENST00000443790 CARMIL1Q5VZK9 1371 aa34.59■■■■□ 3.13
EDEM1-203ENST00000443790 ADCY10Q96PN6 1610 aa34.58■■■■□ 3.13
EDEM1-203ENST00000443790 MAPKBP1O60336 1514 aa34.55■■■■□ 3.12
EDEM1-203ENST00000443790 NPM1P06748 294 aaKnown RBP eCLIP34.51■■■■□ 3.12
EDEM1-203ENST00000443790 ABCC10Q5T3U5 1492 aa34.5■■■■□ 3.11
EDEM1-203ENST00000443790 DIP2BQ9P265 1576 aa34.43■■■■□ 3.1
EDEM1-203ENST00000443790 FAM69CQ0P6D2 419 aa34.41■■■■□ 3.1
EDEM1-203ENST00000443790 IQGAP2Q13576 1575 aa34.4■■■■□ 3.1
EDEM1-203ENST00000443790 PTPRGP23470 1445 aa34.38■■■■□ 3.09
EDEM1-203ENST00000443790 AEBP2Q6ZN18 517 aaPredicted RBP34.38■■■■□ 3.09
EDEM1-203ENST00000443790 CARMIL2Q6F5E8 1435 aa34.37■■■■□ 3.09
EDEM1-203ENST00000443790 TNIKQ9UKE5 1360 aa34.34■■■■□ 3.09
EDEM1-203ENST00000443790 RAPGEF2Q9Y4G8 1499 aa34.29■■■■□ 3.08
EDEM1-203ENST00000443790 TTBK1Q5TCY1 1321 aaPredicted RBP34.27■■■■□ 3.08
EDEM1-203ENST00000443790 ABCC2Q92887 1545 aa34.24■■■■□ 3.07
EDEM1-203ENST00000443790 DISP1Q96F81 1524 aa34.24■■■■□ 3.07
EDEM1-203ENST00000443790 UGGT2Q9NYU1 1516 aa34.2■■■■□ 3.06
EDEM1-203ENST00000443790 UHRF1BP1LA0JNW5 1464 aa34.18■■■■□ 3.06
EDEM1-203ENST00000443790 UACAQ9BZF9 1416 aa34.13■■■■□ 3.05
EDEM1-203ENST00000443790 TSPOAP1O95153 1857 aa34.13■■■■□ 3.05
EDEM1-203ENST00000443790 KDM6BO15054 1643 aa34.12■■■■□ 3.05
EDEM1-203ENST00000443790 ASXL2Q76L83 1435 aa34.11■■■■□ 3.05
EDEM1-203ENST00000443790 KIAA0556O60303 1618 aa34.11■■■■□ 3.05
EDEM1-203ENST00000443790 PLB1Q6P1J6 1458 aa34.09■■■■□ 3.05
EDEM1-203ENST00000443790 CTTNBP2Q8WZ74 1663 aa34.03■■■■□ 3.04
EDEM1-203ENST00000443790 GLI2P10070 1586 aa34.03■■■■□ 3.04
EDEM1-203ENST00000443790 KDM5BQ9UGL1 1544 aa34.02■■■■□ 3.04
EDEM1-203ENST00000443790 PPRC1Q5VV67 1664 aaKnown RBP33.96■■■■□ 3.03
EDEM1-203ENST00000443790 ZCCHC11Q5TAX3 1644 aaKnown RBP33.95■■■■□ 3.03
EDEM1-203ENST00000443790 PRXQ9BXM0 1461 aa33.95■■■■□ 3.02
EDEM1-203ENST00000443790 EPRSP07814 1512 aaKnown RBP33.91■■■■□ 3.02
EDEM1-203ENST00000443790 GOLGA3Q08378 1498 aa33.9■■■■□ 3.02
EDEM1-203ENST00000443790 MAP3K4Q9Y6R4 1608 aa33.86■■■■□ 3.01
EDEM1-203ENST00000443790 WDR7Q9Y4E6 1490 aa33.79■■■■□ 3
EDEM1-203ENST00000443790 ABCA8O94911 1581 aa33.79■■■■□ 3
EDEM1-203ENST00000443790 TEX14Q8IWB6 1497 aa33.75■■■□□ 2.99
EDEM1-203ENST00000443790 KDM4FA0A1W2PPD8 638 aa33.74■■■□□ 2.99
EDEM1-203ENST00000443790 COL17A1Q9UMD9 1497 aaPredicted RBP33.7■■■□□ 2.99
EDEM1-203ENST00000443790 CSRNP3Q8WYN3 585 aa33.62■■■□□ 2.97
EDEM1-203ENST00000443790 CFAP43Q8NDM7 1665 aa33.6■■■□□ 2.97
EDEM1-203ENST00000443790 SAMD9Q5K651 1589 aa33.56■■■□□ 2.96
EDEM1-203ENST00000443790 MAGI3Q5TCQ9 1506 aa33.56■■■□□ 2.96
EDEM1-203ENST00000443790 CD109Q6YHK3 1445 aa33.55■■■□□ 2.96
EDEM1-203ENST00000443790 P3H3Q8IVL6 736 aa33.54■■■□□ 2.96
EDEM1-203ENST00000443790 KCNH8Q96L42 1107 aa33.54■■■□□ 2.96
EDEM1-203ENST00000443790 EEA1Q15075 1411 aa33.53■■■□□ 2.96
EDEM1-203ENST00000443790 ADGRL1O94910 1474 aa33.51■■■□□ 2.96
EDEM1-203ENST00000443790 FAM9AQ8IZU1 332 aaPredicted RBP33.51■■■□□ 2.95
EDEM1-203ENST00000443790 ATP10BO94823 1461 aa33.48■■■□□ 2.95
EDEM1-203ENST00000443790 ARID3CA6NKF2 412 aa33.45■■■□□ 2.95
EDEM1-203ENST00000443790 RAPGEF6Q8TEU7 1601 aa33.42■■■□□ 2.94
EDEM1-203ENST00000443790 ABCA9Q8IUA7 1624 aa33.34■■■□□ 2.93
EDEM1-203ENST00000443790 FHOD3Q2V2M9 1422 aa33.3■■■□□ 2.92
EDEM1-203ENST00000443790 ARAP3Q8WWN8 1544 aa33.3■■■□□ 2.92
EDEM1-203ENST00000443790 NUP153P49790 1475 aaKnown RBP33.3■■■□□ 2.92
EDEM1-203ENST00000443790 KIF21BO75037 1637 aa33.29■■■□□ 2.92
EDEM1-203ENST00000443790 RANGAP1P46060 587 aaPredicted RBP33.28■■■□□ 2.92
EDEM1-203ENST00000443790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.22■■■□□ 2.91
EDEM1-203ENST00000443790 HNRNPUL2Q1KMD3 747 aaKnown RBP33.22■■■□□ 2.91
EDEM1-203ENST00000443790 EFCAB5A4FU69 1503 aa33.22■■■□□ 2.91
EDEM1-203ENST00000443790 PHLDB1Q86UU1 1377 aa33.21■■■□□ 2.91
EDEM1-203ENST00000443790 NEO1Q92859 1461 aa33.16■■■□□ 2.9
EDEM1-203ENST00000443790 HECW2Q9P2P5 1572 aa33.06■■■□□ 2.88
EDEM1-203ENST00000443790 PLEKHD1A6NEE1 506 aa33.06■■■□□ 2.88
EDEM1-203ENST00000443790 FRMPD1Q5SYB0 1578 aa33.05■■■□□ 2.88
EDEM1-203ENST00000443790 RAPGEF3O95398 923 aa33.05■■■□□ 2.88
EDEM1-203ENST00000443790 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.99■■■□□ 2.875e-11■■■■■ 71.6
EDEM1-203ENST00000443790 CHIC1Q5VXU3 224 aa32.98■■■□□ 2.87
EDEM1-203ENST00000443790 CDK13Q14004 1512 aaKnown RBP32.97■■■□□ 2.87
EDEM1-203ENST00000443790 TTC37Q6PGP7 1564 aa32.96■■■□□ 2.87
EDEM1-203ENST00000443790 UBTFP17480 764 aaKnown RBP32.96■■■□□ 2.87
EDEM1-203ENST00000443790 CFAP74Q9C0B2 1584 aa32.95■■■□□ 2.86
EDEM1-203ENST00000443790 EHMT2Q96KQ7 1210 aa32.94■■■□□ 2.86
EDEM1-203ENST00000443790 FANCAO15360 1455 aa32.93■■■□□ 2.86
EDEM1-203ENST00000443790 AKNAQ7Z591 1439 aa32.92■■■□□ 2.86
EDEM1-203ENST00000443790 DENND4BO75064 1496 aaPredicted RBP32.92■■■□□ 2.86
EDEM1-203ENST00000443790 ADAMTSL3P82987 1691 aa32.91■■■□□ 2.86
EDEM1-203ENST00000443790 ARHGAP35Q9NRY4 1499 aa32.91■■■□□ 2.86
EDEM1-203ENST00000443790 RICTORQ6R327 1708 aa32.91■■■□□ 2.86
EDEM1-203ENST00000443790 ILDR1Q86SU0 546 aaPredicted RBP32.9■■■□□ 2.86
EDEM1-203ENST00000443790 FMN1Q68DA7 1419 aa32.9■■■□□ 2.86
EDEM1-203ENST00000443790 HECW1Q76N89 1606 aa32.88■■■□□ 2.85
EDEM1-203ENST00000443790 ARHGEF40Q8TER5 1519 aa32.88■■■□□ 2.85
EDEM1-203ENST00000443790 BCORL1Q5H9F3 1711 aa32.85■■■□□ 2.85
EDEM1-203ENST00000443790 PTPRMP28827 1452 aa32.83■■■□□ 2.85
EDEM1-203ENST00000443790 ZMYM4Q5VZL5 1548 aa32.81■■■□□ 2.84
EDEM1-203ENST00000443790 ARID4BQ4LE39 1312 aaPredicted RBP32.78■■■□□ 2.84
EDEM1-203ENST00000443790 PLCH2O75038 1416 aa32.77■■■□□ 2.84
EDEM1-203ENST00000443790 MADDQ8WXG6 1647 aa32.77■■■□□ 2.84
EDEM1-203ENST00000443790 ATP1B4Q9UN42 357 aaPredicted RBP32.77■■■□□ 2.84
EDEM1-203ENST00000443790 ZFYVE16Q7Z3T8 1539 aa32.72■■■□□ 2.83
EDEM1-203ENST00000443790 CDK11AQ9UQ88 783 aaPredicted RBP32.71■■■□□ 2.83
EDEM1-203ENST00000443790 MAGI2Q86UL8 1455 aa32.7■■■□□ 2.83
EDEM1-203ENST00000443790 MYO5CQ9NQX4 1742 aa32.7■■■□□ 2.83
EDEM1-203ENST00000443790 POGZQ7Z3K3 1410 aa32.69■■■□□ 2.82
EDEM1-203ENST00000443790 YEATS2Q9ULM3 1422 aa32.69■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms