RNA–Protein interactions for RNA: ENST00000443598.6

HNF4A-205, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-205ENST00000443598 JPH4Q96JJ6 628 aa36.24■■■■□ 3.39
HNF4A-205ENST00000443598 KIAA0586Q9BVV6 1533 aa36.21■■■■□ 3.39
HNF4A-205ENST00000443598 PRG4Q92954 1404 aaPredicted RBP36.18■■■■□ 3.38
HNF4A-205ENST00000443598 RAPGEF2Q9Y4G8 1499 aa36.06■■■■□ 3.36
HNF4A-205ENST00000443598 IQGAP2Q13576 1575 aa35.95■■■■□ 3.35
HNF4A-205ENST00000443598 TRHP20396 242 aaPredicted RBP35.92■■■■□ 3.34
HNF4A-205ENST00000443598 PRXQ9BXM0 1461 aa35.86■■■■□ 3.33
HNF4A-205ENST00000443598 CARMIL2Q6F5E8 1435 aa35.83■■■■□ 3.33
HNF4A-205ENST00000443598 EEA1Q15075 1411 aa35.77■■■■□ 3.32
HNF4A-205ENST00000443598 UGGT2Q9NYU1 1516 aa35.76■■■■□ 3.32
HNF4A-205ENST00000443598 CTTNBP2Q8WZ74 1663 aa35.76■■■■□ 3.31
HNF4A-205ENST00000443598 CSRNP3Q8WYN3 585 aa35.73■■■■□ 3.31
HNF4A-205ENST00000443598 TNIKQ9UKE5 1360 aa35.73■■■■□ 3.31
HNF4A-205ENST00000443598 PTPRGP23470 1445 aa35.72■■■■□ 3.31
HNF4A-205ENST00000443598 DISP1Q96F81 1524 aa35.71■■■■□ 3.31
HNF4A-205ENST00000443598 ADCY10Q96PN6 1610 aa35.69■■■■□ 3.3
HNF4A-205ENST00000443598 NPM1P06748 294 aaKnown RBP eCLIP35.64■■■■□ 3.3
HNF4A-205ENST00000443598 CHIC1Q5VXU3 224 aa35.63■■■■□ 3.29
HNF4A-205ENST00000443598 KIAA0556O60303 1618 aa35.61■■■■□ 3.29
HNF4A-205ENST00000443598 MAPKBP1O60336 1514 aa35.57■■■■□ 3.28
HNF4A-205ENST00000443598 GOLGA3Q08378 1498 aa35.54■■■■□ 3.28
HNF4A-205ENST00000443598 TTBK1Q5TCY1 1321 aaPredicted RBP35.52■■■■□ 3.28
HNF4A-205ENST00000443598 UHRF1BP1LA0JNW5 1464 aa35.51■■■■□ 3.27
HNF4A-205ENST00000443598 KIF13AQ9H1H9 1805 aa35.49■■■■□ 3.27
HNF4A-205ENST00000443598 UACAQ9BZF9 1416 aa35.49■■■■□ 3.27
HNF4A-205ENST00000443598 ABCC2Q92887 1545 aa35.46■■■■□ 3.27
HNF4A-205ENST00000443598 ABCC10Q5T3U5 1492 aa35.43■■■■□ 3.26
HNF4A-205ENST00000443598 FAM9AQ8IZU1 332 aaPredicted RBP35.43■■■■□ 3.26
HNF4A-205ENST00000443598 KIF21BO75037 1637 aa35.4■■■■□ 3.26
HNF4A-205ENST00000443598 DIP2BQ9P265 1576 aa35.35■■■■□ 3.25
HNF4A-205ENST00000443598 KDM5BQ9UGL1 1544 aa35.33■■■■□ 3.25
HNF4A-205ENST00000443598 FAM69CQ0P6D2 419 aa35.32■■■■□ 3.25
HNF4A-205ENST00000443598 SAMD9Q5K651 1589 aa35.28■■■■□ 3.24
HNF4A-205ENST00000443598 PLB1Q6P1J6 1458 aa35.27■■■■□ 3.24
HNF4A-205ENST00000443598 ASXL2Q76L83 1435 aa35.26■■■■□ 3.23
HNF4A-205ENST00000443598 ABCA8O94911 1581 aa35.25■■■■□ 3.23
HNF4A-205ENST00000443598 ZCCHC11Q5TAX3 1644 aaKnown RBP35.23■■■■□ 3.23
HNF4A-205ENST00000443598 P3H3Q8IVL6 736 aa35.15■■■■□ 3.22
HNF4A-205ENST00000443598 GLI2P10070 1586 aa35.14■■■■□ 3.22
HNF4A-205ENST00000443598 EFCAB5A4FU69 1503 aa35.08■■■■□ 3.21
HNF4A-205ENST00000443598 EPRSP07814 1512 aaKnown RBP35.06■■■■□ 3.2
HNF4A-205ENST00000443598 TSPOAP1O95153 1857 aa35.05■■■■□ 3.2
HNF4A-205ENST00000443598 UBTFP17480 764 aaKnown RBP35.04■■■■□ 3.2
HNF4A-205ENST00000443598 WDR7Q9Y4E6 1490 aa35.03■■■■□ 3.2
HNF4A-205ENST00000443598 RANGAP1P46060 587 aaPredicted RBP35.02■■■■□ 3.2
HNF4A-205ENST00000443598 RAPGEF6Q8TEU7 1601 aa34.99■■■■□ 3.19
HNF4A-205ENST00000443598 FHOD3Q2V2M9 1422 aa34.99■■■■□ 3.19
HNF4A-205ENST00000443598 MAP3K4Q9Y6R4 1608 aa34.94■■■■□ 3.18
HNF4A-205ENST00000443598 EHMT2Q96KQ7 1210 aa34.94■■■■□ 3.18
HNF4A-205ENST00000443598 ATP10BO94823 1461 aa34.94■■■■□ 3.18
HNF4A-205ENST00000443598 PPRC1Q5VV67 1664 aaKnown RBP34.93■■■■□ 3.18
HNF4A-205ENST00000443598 KDM6BO15054 1643 aa34.87■■■■□ 3.17
HNF4A-205ENST00000443598 NUP153P49790 1475 aaKnown RBP34.85■■■■□ 3.17
HNF4A-205ENST00000443598 ARID3CA6NKF2 412 aa34.81■■■■□ 3.16
HNF4A-205ENST00000443598 TEX14Q8IWB6 1497 aa34.81■■■■□ 3.16
HNF4A-205ENST00000443598 CFAP43Q8NDM7 1665 aa34.81■■■■□ 3.16
HNF4A-205ENST00000443598 ARHGAP35Q9NRY4 1499 aa34.8■■■■□ 3.16
HNF4A-205ENST00000443598 KCNH8Q96L42 1107 aa34.8■■■■□ 3.16
HNF4A-205ENST00000443598 FMN1Q68DA7 1419 aa34.75■■■■□ 3.15
HNF4A-205ENST00000443598 CD109Q6YHK3 1445 aa34.74■■■■□ 3.15
HNF4A-205ENST00000443598 MAGI3Q5TCQ9 1506 aa34.73■■■■□ 3.15
HNF4A-205ENST00000443598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.71■■■■□ 3.15
HNF4A-205ENST00000443598 HNRNPUL2Q1KMD3 747 aaKnown RBP34.71■■■■□ 3.15
HNF4A-205ENST00000443598 ABCA9Q8IUA7 1624 aa34.66■■■■□ 3.14
HNF4A-205ENST00000443598 PLEKHD1A6NEE1 506 aa34.62■■■■□ 3.13
HNF4A-205ENST00000443598 HECW1Q76N89 1606 aa34.6■■■■□ 3.13
HNF4A-205ENST00000443598 COL17A1Q9UMD9 1497 aaPredicted RBP34.59■■■■□ 3.13
HNF4A-205ENST00000443598 CDK13Q14004 1512 aaKnown RBP34.54■■■■□ 3.12
HNF4A-205ENST00000443598 PHLDB1Q86UU1 1377 aa34.49■■■■□ 3.11
HNF4A-205ENST00000443598 CLIP1P30622 1438 aa34.48■■■■□ 3.11
HNF4A-205ENST00000443598 ATP1B4Q9UN42 357 aaPredicted RBP34.48■■■■□ 3.11
HNF4A-205ENST00000443598 ARAP3Q8WWN8 1544 aa34.44■■■■□ 3.1
HNF4A-205ENST00000443598 CDK11AQ9UQ88 783 aaPredicted RBP34.43■■■■□ 3.1
HNF4A-205ENST00000443598 CASKIN1Q8WXD9 1431 aa34.43■■■■□ 3.1
HNF4A-205ENST00000443598 NEO1Q92859 1461 aa34.42■■■■□ 3.1
HNF4A-205ENST00000443598 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.41■■■■□ 3.1
HNF4A-205ENST00000443598 LRRIQ1Q96JM4 1722 aa34.39■■■■□ 3.1
HNF4A-205ENST00000443598 PCF11O94913 1555 aaKnown RBP34.38■■■■□ 3.09
HNF4A-205ENST00000443598 AEBP2Q6ZN18 517 aaPredicted RBP34.37■■■■□ 3.09
HNF4A-205ENST00000443598 TTC37Q6PGP7 1564 aa34.35■■■■□ 3.09
HNF4A-205ENST00000443598 CCDC18Q5T9S5 1454 aa34.35■■■■□ 3.09
HNF4A-205ENST00000443598 FYCO1Q9BQS8 1478 aa34.33■■■■□ 3.09
HNF4A-205ENST00000443598 TROQ12816 1431 aaPredicted RBP34.3■■■■□ 3.08
HNF4A-205ENST00000443598 CFAP74Q9C0B2 1584 aa34.29■■■■□ 3.08
HNF4A-205ENST00000443598 FANCAO15360 1455 aa34.26■■■■□ 3.07
HNF4A-205ENST00000443598 KIF14Q15058 1648 aa34.25■■■■□ 3.07
HNF4A-205ENST00000443598 CEP162Q5TB80 1403 aa34.24■■■■□ 3.07
HNF4A-205ENST00000443598 PLCH2O75038 1416 aa34.22■■■■□ 3.07
HNF4A-205ENST00000443598 AKNAQ7Z591 1439 aa34.22■■■■□ 3.07
HNF4A-205ENST00000443598 MYO5CQ9NQX4 1742 aa34.2■■■■□ 3.07
HNF4A-205ENST00000443598 KDM4FA0A1W2PPD8 638 aa34.19■■■■□ 3.06
HNF4A-205ENST00000443598 RAPGEF3O95398 923 aa34.16■■■■□ 3.06
HNF4A-205ENST00000443598 FRMPD1Q5SYB0 1578 aa34.15■■■■□ 3.06
HNF4A-205ENST00000443598 DENND4BO75064 1496 aaPredicted RBP34.14■■■■□ 3.06
HNF4A-205ENST00000443598 RICTORQ6R327 1708 aa34.11■■■■□ 3.05
HNF4A-205ENST00000443598 LOC105371045A0A1W2PR82 267 aa34.11■■■■□ 3.05
HNF4A-205ENST00000443598 ADGRL1O94910 1474 aa34.09■■■■□ 3.05
HNF4A-205ENST00000443598 EFCAB2Q5VUJ9 269 aa34.09■■■■□ 3.05
HNF4A-205ENST00000443598 ARHGAP5Q13017 1502 aa34.01■■■■□ 3.04
HNF4A-205ENST00000443598 CDC42BPBQ9Y5S2 1711 aa34.01■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms