RNA–Protein interactions for RNA: ENST00000442139.5

ERGIC3-208, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-208ENST00000442139 SHROOM2Q13796 1616 aa20.58■□□□□ 0.89
ERGIC3-208ENST00000442139 IQGAP2Q13576 1575 aa20.53■□□□□ 0.88
ERGIC3-208ENST00000442139 RIMBP3CA6NJZ7 1639 aa20.51■□□□□ 0.87
ERGIC3-208ENST00000442139 RIMBP3BA6NNM3 1639 aa20.51■□□□□ 0.87
ERGIC3-208ENST00000442139 RIMBP3Q9UFD9 1639 aa20.51■□□□□ 0.87
ERGIC3-208ENST00000442139 ARHGEF11O15085 1522 aa20.51■□□□□ 0.87
ERGIC3-208ENST00000442139 FAM9AQ8IZU1 332 aaPredicted RBP20.47■□□□□ 0.87
ERGIC3-208ENST00000442139 GOLGA3Q08378 1498 aa20.44■□□□□ 0.86
ERGIC3-208ENST00000442139 JPH4Q96JJ6 628 aa20.44■□□□□ 0.86
ERGIC3-208ENST00000442139 UGGT2Q9NYU1 1516 aa20.41■□□□□ 0.86
ERGIC3-208ENST00000442139 CARMIL2Q6F5E8 1435 aa20.39■□□□□ 0.85
ERGIC3-208ENST00000442139 PRG4Q92954 1404 aaPredicted RBP20.38■□□□□ 0.85
ERGIC3-208ENST00000442139 ARAP1Q96P48 1450 aa20.31■□□□□ 0.84
ERGIC3-208ENST00000442139 KIAA0556O60303 1618 aa20.31■□□□□ 0.84
ERGIC3-208ENST00000442139 ERCC6L2Q5T890 1561 aa20.3■□□□□ 0.84
ERGIC3-208ENST00000442139 UBTFP17480 764 aaKnown RBP20.28■□□□□ 0.84
ERGIC3-208ENST00000442139 EFCAB5A4FU69 1503 aa20.27■□□□□ 0.84
ERGIC3-208ENST00000442139 DISP1Q96F81 1524 aa20.27■□□□□ 0.84
ERGIC3-208ENST00000442139 SAMD9Q5K651 1589 aa20.26■□□□□ 0.83
ERGIC3-208ENST00000442139 TNIKQ9UKE5 1360 aa20.25■□□□□ 0.83
ERGIC3-208ENST00000442139 CYB5RLQ6IPT4 315 aa20.22■□□□□ 0.83
ERGIC3-208ENST00000442139 PTPRGP23470 1445 aa20.19■□□□□ 0.82
ERGIC3-208ENST00000442139 UHRF1BP1LA0JNW5 1464 aa20.11■□□□□ 0.81
ERGIC3-208ENST00000442139 UACAQ9BZF9 1416 aa20.1■□□□□ 0.81
ERGIC3-208ENST00000442139 ADCY10Q96PN6 1610 aa20.09■□□□□ 0.81
ERGIC3-208ENST00000442139 EHMT2Q96KQ7 1210 aa20.09■□□□□ 0.81
ERGIC3-208ENST00000442139 ABCC2Q92887 1545 aa20.08■□□□□ 0.81
ERGIC3-208ENST00000442139 ABCA8O94911 1581 aa20.06■□□□□ 0.8
ERGIC3-208ENST00000442139 ARHGAP35Q9NRY4 1499 aa20.05■□□□□ 0.8
ERGIC3-208ENST00000442139 FMN1Q68DA7 1419 aa20.04■□□□□ 0.8
ERGIC3-208ENST00000442139 NPM1P06748 294 aaKnown RBP eCLIP20.04■□□□□ 0.8
ERGIC3-208ENST00000442139 RAPGEF6Q8TEU7 1601 aa20.04■□□□□ 0.8
ERGIC3-208ENST00000442139 CLIP1P30622 1438 aa20.02■□□□□ 0.8
ERGIC3-208ENST00000442139 FHOD3Q2V2M9 1422 aa20.02■□□□□ 0.79
ERGIC3-208ENST00000442139 RANGAP1P46060 587 aaPredicted RBP20.01■□□□□ 0.79
ERGIC3-208ENST00000442139 P3H3Q8IVL6 736 aa20■□□□□ 0.79
ERGIC3-208ENST00000442139 MAPKBP1O60336 1514 aa20■□□□□ 0.79
ERGIC3-208ENST00000442139 KDM5BQ9UGL1 1544 aa19.99■□□□□ 0.79
ERGIC3-208ENST00000442139 CEP162Q5TB80 1403 aa19.99■□□□□ 0.79
ERGIC3-208ENST00000442139 TTBK1Q5TCY1 1321 aaPredicted RBP19.99■□□□□ 0.79
ERGIC3-208ENST00000442139 PLB1Q6P1J6 1458 aa19.99■□□□□ 0.79
ERGIC3-208ENST00000442139 ZCCHC11Q5TAX3 1644 aaKnown RBP19.97■□□□□ 0.79
ERGIC3-208ENST00000442139 LOC105371045A0A1W2PR82 267 aa19.94■□□□□ 0.78
ERGIC3-208ENST00000442139 HECW1Q76N89 1606 aa19.94■□□□□ 0.78
ERGIC3-208ENST00000442139 NUP153P49790 1475 aaKnown RBP19.87■□□□□ 0.77
ERGIC3-208ENST00000442139 FYCO1Q9BQS8 1478 aa19.87■□□□□ 0.77
ERGIC3-208ENST00000442139 CASKIN1Q8WXD9 1431 aa19.86■□□□□ 0.77
ERGIC3-208ENST00000442139 KIF13AQ9H1H9 1805 aa19.85■□□□□ 0.77
ERGIC3-208ENST00000442139 CCDC18Q5T9S5 1454 aa19.85■□□□□ 0.77
ERGIC3-208ENST00000442139 PCF11O94913 1555 aaKnown RBP19.84■□□□□ 0.77
ERGIC3-208ENST00000442139 ATP10BO94823 1461 aa19.84■□□□□ 0.77
ERGIC3-208ENST00000442139 ASXL2Q76L83 1435 aa19.83■□□□□ 0.76
ERGIC3-208ENST00000442139 ABCC10Q5T3U5 1492 aa19.81■□□□□ 0.76
ERGIC3-208ENST00000442139 WDR7Q9Y4E6 1490 aa19.81■□□□□ 0.76
ERGIC3-208ENST00000442139 GLI2P10070 1586 aa19.8■□□□□ 0.76
ERGIC3-208ENST00000442139 DIP2BQ9P265 1576 aa19.8■□□□□ 0.76
ERGIC3-208ENST00000442139 EPRSP07814 1512 aaKnown RBP19.8■□□□□ 0.76
ERGIC3-208ENST00000442139 LRRIQ1Q96JM4 1722 aa19.79■□□□□ 0.76
ERGIC3-208ENST00000442139 CDK11AQ9UQ88 783 aaPredicted RBP19.78■□□□□ 0.76
ERGIC3-208ENST00000442139 VPS8Q8N3P4 1428 aa19.76■□□□□ 0.75
ERGIC3-208ENST00000442139 TRHP20396 242 aaPredicted RBP19.75■□□□□ 0.75
ERGIC3-208ENST00000442139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.74■□□□□ 0.75
ERGIC3-208ENST00000442139 HNRNPUL2Q1KMD3 747 aaKnown RBP19.74■□□□□ 0.75
ERGIC3-208ENST00000442139 CFAP43Q8NDM7 1665 aa19.74■□□□□ 0.75
ERGIC3-208ENST00000442139 PLEKHD1A6NEE1 506 aa19.73■□□□□ 0.75
ERGIC3-208ENST00000442139 ATP1B4Q9UN42 357 aaPredicted RBP19.73■□□□□ 0.75
ERGIC3-208ENST00000442139 CDK13Q14004 1512 aaKnown RBP19.71■□□□□ 0.75
ERGIC3-208ENST00000442139 MAP3K4Q9Y6R4 1608 aa19.7■□□□□ 0.74
ERGIC3-208ENST00000442139 ABCA9Q8IUA7 1624 aa19.69■□□□□ 0.74
ERGIC3-208ENST00000442139 FAM69CQ0P6D2 419 aa19.68■□□□□ 0.74
ERGIC3-208ENST00000442139 MAP3K1Q13233 1512 aa19.67■□□□□ 0.74
ERGIC3-208ENST00000442139 ARID3CA6NKF2 412 aa19.67■□□□□ 0.74
ERGIC3-208ENST00000442139 KIF14Q15058 1648 aa19.66■□□□□ 0.74
ERGIC3-208ENST00000442139 TSPOAP1O95153 1857 aa19.66■□□□□ 0.74
ERGIC3-208ENST00000442139 TROQ12816 1431 aaPredicted RBP19.65■□□□□ 0.74
ERGIC3-208ENST00000442139 TEX14Q8IWB6 1497 aa19.63■□□□□ 0.73
ERGIC3-208ENST00000442139 TIAM1Q13009 1591 aa19.61■□□□□ 0.73
ERGIC3-208ENST00000442139 KCNH8Q96L42 1107 aa19.61■□□□□ 0.73
ERGIC3-208ENST00000442139 MYO5CQ9NQX4 1742 aa19.6■□□□□ 0.73
ERGIC3-208ENST00000442139 EHBP1L1Q8N3D4 1523 aa19.6■□□□□ 0.73
ERGIC3-208ENST00000442139 APLP2Q06481 763 aa19.59■□□□□ 0.73
ERGIC3-208ENST00000442139 MAGI3Q5TCQ9 1506 aa19.59■□□□□ 0.73
ERGIC3-208ENST00000442139 PPRC1Q5VV67 1664 aaKnown RBP19.59■□□□□ 0.73
ERGIC3-208ENST00000442139 CFAP74Q9C0B2 1584 aa19.58■□□□□ 0.73
ERGIC3-208ENST00000442139 CD109Q6YHK3 1445 aa19.58■□□□□ 0.72
ERGIC3-208ENST00000442139 MTUS2Q5JR59 1369 aa19.57■□□□□ 0.72
ERGIC3-208ENST00000442139 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.56■□□□□ 0.72
ERGIC3-208ENST00000442139 ARAP3Q8WWN8 1544 aa19.56■□□□□ 0.72
ERGIC3-208ENST00000442139 SUPT6HQ7KZ85 1726 aaKnown RBP19.56■□□□□ 0.72
ERGIC3-208ENST00000442139 TTC37Q6PGP7 1564 aa19.54■□□□□ 0.72
ERGIC3-208ENST00000442139 PHLDB1Q86UU1 1377 aa19.54■□□□□ 0.72
ERGIC3-208ENST00000442139 ITSN2Q9NZM3 1697 aa19.52■□□□□ 0.71
ERGIC3-208ENST00000442139 CDC42BPAQ5VT25 1732 aa19.5■□□□□ 0.71
ERGIC3-208ENST00000442139 PREX2Q70Z35 1606 aa19.5■□□□□ 0.71
ERGIC3-208ENST00000442139 LRRC9Q6ZRR7 1453 aa19.49■□□□□ 0.71
ERGIC3-208ENST00000442139 NEO1Q92859 1461 aa19.49■□□□□ 0.71
ERGIC3-208ENST00000442139 PLCH2O75038 1416 aa19.47■□□□□ 0.71
ERGIC3-208ENST00000442139 CDC42BPBQ9Y5S2 1711 aa19.47■□□□□ 0.71
ERGIC3-208ENST00000442139 KDM6BO15054 1643 aa19.46■□□□□ 0.71
ERGIC3-208ENST00000442139 FANCAO15360 1455 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms