RNA–Protein interactions for RNA: ENST00000441747.6

PCSK4-202, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 2

Gene PCSK4, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-202ENST00000441747 RRBP1Q9P2E9 1410 aaKnown RBP24.3■■□□□ 1.48
PCSK4-202ENST00000441747 GAPVD1Q14C86 1478 aa24.29■■□□□ 1.48
PCSK4-202ENST00000441747 ACIN1Q9UKV3 1341 aaKnown RBP24.29■■□□□ 1.48
PCSK4-202ENST00000441747 TIAM1Q13009 1591 aa24.28■■□□□ 1.48
PCSK4-202ENST00000441747 FHAD1B1AJZ9 1412 aa24.25■■□□□ 1.47
PCSK4-202ENST00000441747 TDRD9Q8NDG6 1382 aaKnown RBP24.24■■□□□ 1.47
PCSK4-202ENST00000441747 HNRNPUL2Q1KMD3 747 aaKnown RBP24.24■■□□□ 1.47
PCSK4-202ENST00000441747 NEUROD1Q13562 356 aa24.23■■□□□ 1.47
PCSK4-202ENST00000441747 MRC2Q9UBG0 1479 aa24.23■■□□□ 1.47
PCSK4-202ENST00000441747 CFAP43Q8NDM7 1665 aa24.22■■□□□ 1.47
PCSK4-202ENST00000441747 PCF11O94913 1555 aaKnown RBP24.2■■□□□ 1.46
PCSK4-202ENST00000441747 AQRO60306 1485 aaKnown RBP eCLIP24.18■■□□□ 1.465e-8■■■■□ 21.5
PCSK4-202ENST00000441747 LRRC9Q6ZRR7 1453 aa24.16■■□□□ 1.46
PCSK4-202ENST00000441747 SAMD9Q5K651 1589 aa24.15■■□□□ 1.46
PCSK4-202ENST00000441747 PBRM1Q86U86 1689 aa24.15■■□□□ 1.46
PCSK4-202ENST00000441747 FYCO1Q9BQS8 1478 aa24.15■■□□□ 1.46
PCSK4-202ENST00000441747 GTF3C3Q9Y5Q9 886 aa24.14■■□□□ 1.45
PCSK4-202ENST00000441747 FHOD3Q2V2M9 1422 aa24.14■■□□□ 1.45
PCSK4-202ENST00000441747 CASKIN1Q8WXD9 1431 aa24.12■■□□□ 1.45
PCSK4-202ENST00000441747 CCNB3Q8WWL7 1395 aa24.11■■□□□ 1.45
PCSK4-202ENST00000441747 WDR62O43379 1518 aa24.11■■□□□ 1.45
PCSK4-202ENST00000441747 ADAMTS12P58397 1594 aa24.06■■□□□ 1.44
PCSK4-202ENST00000441747 FMN1Q68DA7 1419 aa24.05■■□□□ 1.44
PCSK4-202ENST00000441747 SNAPC4Q5SXM2 1469 aa24.05■■□□□ 1.44
PCSK4-202ENST00000441747 P3H3Q8IVL6 736 aa24.03■■□□□ 1.44
PCSK4-202ENST00000441747 IFT140Q96RY7 1462 aa24.03■■□□□ 1.44
PCSK4-202ENST00000441747 GRIN2BQ13224 1484 aa23.99■■□□□ 1.43
PCSK4-202ENST00000441747 CLSPNQ9HAW4 1339 aa23.99■■□□□ 1.43
PCSK4-202ENST00000441747 PHLDB1Q86UU1 1377 aa23.98■■□□□ 1.43
PCSK4-202ENST00000441747 DHX57Q6P158 1386 aaKnown RBP23.97■■□□□ 1.43
PCSK4-202ENST00000441747 THOC2Q8NI27 1593 aaKnown RBP23.96■■□□□ 1.43
PCSK4-202ENST00000441747 CENPBP07199 599 aaPredicted RBP23.93■■□□□ 1.42
PCSK4-202ENST00000441747 LRRIQ1Q96JM4 1722 aa23.92■■□□□ 1.42
PCSK4-202ENST00000441747 ZNF608Q9ULD9 1512 aaPredicted RBP23.91■■□□□ 1.42
PCSK4-202ENST00000441747 IQGAP2Q13576 1575 aa23.91■■□□□ 1.42
PCSK4-202ENST00000441747 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.88■■□□□ 1.41
PCSK4-202ENST00000441747 EIF4G3O43432 1585 aaKnown RBP23.84■■□□□ 1.41
PCSK4-202ENST00000441747 UGGT2Q9NYU1 1516 aa23.83■■□□□ 1.41
PCSK4-202ENST00000441747 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
PCSK4-202ENST00000441747 ATP1B4Q9UN42 357 aaPredicted RBP23.8■■□□□ 1.4
PCSK4-202ENST00000441747 ZNF316A6NFI3 1004 aaPredicted RBP23.79■■□□□ 1.4
PCSK4-202ENST00000441747 RAB3GAP2Q9H2M9 1393 aa23.77■■□□□ 1.4
PCSK4-202ENST00000441747 EHBP1L1Q8N3D4 1523 aa23.77■■□□□ 1.4
PCSK4-202ENST00000441747 CCDC18Q5T9S5 1454 aa23.76■■□□□ 1.39
PCSK4-202ENST00000441747 HECW1Q76N89 1606 aa23.76■■□□□ 1.39
PCSK4-202ENST00000441747 SETD5Q9C0A6 1442 aa23.75■■□□□ 1.39
PCSK4-202ENST00000441747 KIAA0586Q9BVV6 1533 aa23.75■■□□□ 1.39
PCSK4-202ENST00000441747 FGD6Q6ZV73 1430 aa23.75■■□□□ 1.39
PCSK4-202ENST00000441747 DIEXFQ68CQ4 756 aaKnown RBP23.74■■□□□ 1.39
PCSK4-202ENST00000441747 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
PCSK4-202ENST00000441747 MTUS2Q5JR59 1369 aa23.74■■□□□ 1.39
PCSK4-202ENST00000441747 GRIN2AQ12879 1464 aa23.73■■□□□ 1.39
PCSK4-202ENST00000441747 SUPT6HQ7KZ85 1726 aaKnown RBP23.73■■□□□ 1.39
PCSK4-202ENST00000441747 MAGI1Q96QZ7 1491 aaPredicted RBP23.72■■□□□ 1.39
PCSK4-202ENST00000441747 ITGAEP38570 1179 aa23.72■■□□□ 1.39
PCSK4-202ENST00000441747 NCOA2Q15596 1464 aa23.71■■□□□ 1.39
PCSK4-202ENST00000441747 MAGI3Q5TCQ9 1506 aa23.7■■□□□ 1.38
PCSK4-202ENST00000441747 MAPKBP1O60336 1514 aa23.69■■□□□ 1.38
PCSK4-202ENST00000441747 FAM50AQ14320 339 aaKnown RBP23.68■■□□□ 1.38
PCSK4-202ENST00000441747 KIAA0556O60303 1618 aa23.68■■□□□ 1.38
PCSK4-202ENST00000441747 DISP1Q96F81 1524 aa23.68■■□□□ 1.38
PCSK4-202ENST00000441747 MYOM3Q5VTT5 1437 aa23.66■■□□□ 1.38
PCSK4-202ENST00000441747 EPRSP07814 1512 aaKnown RBP23.66■■□□□ 1.38
PCSK4-202ENST00000441747 SYNJ2O15056 1496 aa23.63■■□□□ 1.37
PCSK4-202ENST00000441747 CEP170Q5SW79 1584 aa23.6■■□□□ 1.37
PCSK4-202ENST00000441747 PTPN23Q9H3S7 1636 aa23.57■■□□□ 1.36
PCSK4-202ENST00000441747 TCOF1Q13428 1488 aaKnown RBP23.57■■□□□ 1.36
PCSK4-202ENST00000441747 CDK13Q14004 1512 aaKnown RBP23.56■■□□□ 1.36
PCSK4-202ENST00000441747 PTPRKQ15262 1439 aa23.55■■□□□ 1.36
PCSK4-202ENST00000441747 NUP160Q12769 1436 aa23.55■■□□□ 1.36
PCSK4-202ENST00000441747 HFM1A2PYH4 1435 aa23.54■■□□□ 1.36
PCSK4-202ENST00000441747 RAPGEF6Q8TEU7 1601 aa23.52■■□□□ 1.36
PCSK4-202ENST00000441747 NUP153P49790 1475 aaKnown RBP23.5■■□□□ 1.35
PCSK4-202ENST00000441747 MIA2Q96PC5 1412 aa23.48■■□□□ 1.35
PCSK4-202ENST00000441747 CHMP7Q8WUX9 453 aaPredicted RBP23.47■■□□□ 1.35
PCSK4-202ENST00000441747 YTHDC1Q96MU7 727 aaKnown RBP23.46■■□□□ 1.35
PCSK4-202ENST00000441747 NAIPQ13075 1403 aa23.45■■□□□ 1.34
PCSK4-202ENST00000441747 AKNAQ7Z591 1439 aa23.42■■□□□ 1.34
PCSK4-202ENST00000441747 GCC2Q8IWJ2 1684 aa23.4■■□□□ 1.34
PCSK4-202ENST00000441747 UACAQ9BZF9 1416 aa23.4■■□□□ 1.34
PCSK4-202ENST00000441747 TIMELESSQ9UNS1 1208 aa23.37■■□□□ 1.33
PCSK4-202ENST00000441747 CARMIL2Q6F5E8 1435 aa23.36■■□□□ 1.33
PCSK4-202ENST00000441747 JPH4Q96JJ6 628 aa23.33■■□□□ 1.33
PCSK4-202ENST00000441747 PLB1Q6P1J6 1458 aa23.33■■□□□ 1.33
PCSK4-202ENST00000441747 ADCY10Q96PN6 1610 aa23.33■■□□□ 1.32
PCSK4-202ENST00000441747 TROQ12816 1431 aaPredicted RBP23.31■■□□□ 1.32
PCSK4-202ENST00000441747 ABCA8O94911 1581 aa23.3■■□□□ 1.32
PCSK4-202ENST00000441747 SIN3AQ96ST3 1273 aa23.3■■□□□ 1.32
PCSK4-202ENST00000441747 FBLN2P98095 1184 aa23.29■■□□□ 1.32
PCSK4-202ENST00000441747 MIER1Q8N108 512 aa23.29■■□□□ 1.32
PCSK4-202ENST00000441747 DNMT1P26358 1616 aaKnown RBP23.29■■□□□ 1.32
PCSK4-202ENST00000441747 CDK11AQ9UQ88 783 aaPredicted RBP23.28■■□□□ 1.32
PCSK4-202ENST00000441747 ARID3CA6NKF2 412 aa23.28■■□□□ 1.32
PCSK4-202ENST00000441747 DAPK1P53355 1430 aa23.24■■□□□ 1.31
PCSK4-202ENST00000441747 PRG4Q92954 1404 aaPredicted RBP23.24■■□□□ 1.31
PCSK4-202ENST00000441747 ITSN2Q9NZM3 1697 aa23.24■■□□□ 1.31
PCSK4-202ENST00000441747 ROCK1Q13464 1354 aa23.24■■□□□ 1.31
PCSK4-202ENST00000441747 KDM6BO15054 1643 aa23.23■■□□□ 1.31
PCSK4-202ENST00000441747 ABCC5O15440 1437 aa23.21■■□□□ 1.31
PCSK4-202ENST00000441747 KIF14Q15058 1648 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms