RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 B4GALNT3Q6L9W6 998 aa19.59■□□□□ 0.73
PCNX1-202ENST00000439984 ARID4BQ4LE39 1312 aaPredicted RBP19.57■□□□□ 0.72
PCNX1-202ENST00000439984 PPP4R2Q9NY27 417 aa19.56■□□□□ 0.72
PCNX1-202ENST00000439984 TMC1Q8TDI8 760 aa19.55■□□□□ 0.72
PCNX1-202ENST00000439984 TNNT2P45379 298 aaPredicted RBP19.54■□□□□ 0.72
PCNX1-202ENST00000439984 AMER1Q5JTC6 1135 aaPredicted RBP19.48■□□□□ 0.71
PCNX1-202ENST00000439984 MROH2BQ7Z745 1585 aa19.48■□□□□ 0.71
PCNX1-202ENST00000439984 CEP162Q5TB80 1403 aa19.46■□□□□ 0.71
PCNX1-202ENST00000439984 BECN1Q14457 450 aa19.45■□□□□ 0.7
PCNX1-202ENST00000439984 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
PCNX1-202ENST00000439984 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.43■□□□□ 0.7
PCNX1-202ENST00000439984 PRKCSHP14314 528 aaPredicted RBP19.4■□□□□ 0.7
PCNX1-202ENST00000439984 CLIP1P30622 1438 aa19.39■□□□□ 0.69
PCNX1-202ENST00000439984 WRNQ14191 1432 aaPredicted RBP eCLIP19.38■□□□□ 0.69
PCNX1-202ENST00000439984 DNTTIP2Q5QJE6 756 aaKnown RBP19.36■□□□□ 0.69
PCNX1-202ENST00000439984 NCLP19338 710 aaKnown RBP19.35■□□□□ 0.69
PCNX1-202ENST00000439984 ARID3CA6NKF2 412 aa19.35■□□□□ 0.69
PCNX1-202ENST00000439984 GOLGA3Q08378 1498 aa19.34■□□□□ 0.69
PCNX1-202ENST00000439984 EEA1Q15075 1411 aa19.34■□□□□ 0.69
PCNX1-202ENST00000439984 CDK11BP21127 795 aaKnown RBP19.33■□□□□ 0.69
PCNX1-202ENST00000439984 ARID3AQ99856 593 aa19.33■□□□□ 0.68
PCNX1-202ENST00000439984 SLC24A1O60721 1099 aa19.32■□□□□ 0.68
PCNX1-202ENST00000439984 TNIKQ9UKE5 1360 aa19.3■□□□□ 0.68
PCNX1-202ENST00000439984 PTMAP06454 111 aaKnown RBP19.3■□□□□ 0.68
PCNX1-202ENST00000439984 SOGA1O94964 1423 aa19.3■□□□□ 0.68
PCNX1-202ENST00000439984 BAZ1BQ9UIG0 1483 aaKnown RBP19.29■□□□□ 0.68
PCNX1-202ENST00000439984 WIZO95785 1651 aa19.29■□□□□ 0.68
PCNX1-202ENST00000439984 RGS3P49796 1198 aa19.28■□□□□ 0.68
PCNX1-202ENST00000439984 VSIG10Q8N0Z9 540 aa19.28■□□□□ 0.68
PCNX1-202ENST00000439984 ANO8Q9HCE9 1232 aaPredicted RBP19.28■□□□□ 0.68
PCNX1-202ENST00000439984 ABCC8Q09428 1581 aa19.26■□□□□ 0.67
PCNX1-202ENST00000439984 CCDC88BA6NC98 1476 aa19.25■□□□□ 0.67
PCNX1-202ENST00000439984 FBLN2P98095 1184 aa19.24■□□□□ 0.67
PCNX1-202ENST00000439984 EIF4G2P78344 907 aaKnown RBP eCLIP19.24■□□□□ 0.67
PCNX1-202ENST00000439984 GOLGA6L22H0YM25 854 aa19.23■□□□□ 0.67
PCNX1-202ENST00000439984 WDR43Q15061 677 aaKnown RBP eCLIP19.23■□□□□ 0.67
PCNX1-202ENST00000439984 CHIC2Q9UKJ5 165 aa19.22■□□□□ 0.67
PCNX1-202ENST00000439984 TIMELESSQ9UNS1 1208 aa19.22■□□□□ 0.67
PCNX1-202ENST00000439984 TPRNQ4KMQ1 711 aa19.21■□□□□ 0.67
PCNX1-202ENST00000439984 PNNQ9H307 717 aaKnown RBP19.2■□□□□ 0.66
PCNX1-202ENST00000439984 L1TD1Q5T7N2 865 aaKnown RBP19.2■□□□□ 0.66
PCNX1-202ENST00000439984 IPO9Q96P70 1041 aaKnown RBP19.18■□□□□ 0.66
PCNX1-202ENST00000439984 CEP164Q9UPV0 1460 aa19.17■□□□□ 0.66
PCNX1-202ENST00000439984 SPRYD3Q8NCJ5 442 aa19.17■□□□□ 0.66
PCNX1-202ENST00000439984 SIN3AQ96ST3 1273 aa19.17■□□□□ 0.66
PCNX1-202ENST00000439984 ZBTB7CA1YPR0 619 aa19.15■□□□□ 0.66
PCNX1-202ENST00000439984 ZNF777Q9ULD5 760 aaPredicted RBP19.15■□□□□ 0.66
PCNX1-202ENST00000439984 HSP90AA2PQ14568 343 aaPredicted RBP19.14■□□□□ 0.65
PCNX1-202ENST00000439984 GZF1Q9H116 711 aaPredicted RBP19.13■□□□□ 0.65
PCNX1-202ENST00000439984 MSNP26038 577 aaKnown RBP19.11■□□□□ 0.65
PCNX1-202ENST00000439984 KDM2AQ9Y2K7 1162 aa19.11■□□□□ 0.65
PCNX1-202ENST00000439984 KCNH8Q96L42 1107 aa19.1■□□□□ 0.65
PCNX1-202ENST00000439984 RSPH6AQ9H0K4 717 aa19.09■□□□□ 0.65
PCNX1-202ENST00000439984 PLCB2Q00722 1185 aa19.08■□□□□ 0.64
PCNX1-202ENST00000439984 CCER2I3L3R5 266 aa19.06■□□□□ 0.64
PCNX1-202ENST00000439984 TOP2AP11388 1531 aaKnown RBP19.04■□□□□ 0.64
PCNX1-202ENST00000439984 KIF27Q86VH2 1401 aa19.04■□□□□ 0.64
PCNX1-202ENST00000439984 SLKQ9H2G2 1235 aaPredicted RBP19.03■□□□□ 0.64
PCNX1-202ENST00000439984 FANCIQ9NVI1 1328 aa19■□□□□ 0.63
PCNX1-202ENST00000439984 HSP90AB1P08238 724 aaKnown RBP18.99■□□□□ 0.63
PCNX1-202ENST00000439984 PKNOX2Q96KN3 472 aa18.99■□□□□ 0.63
PCNX1-202ENST00000439984 RRP7BPQ9NSQ0 103 aa18.96■□□□□ 0.63
PCNX1-202ENST00000439984 MTUS2Q5JR59 1369 aa18.96■□□□□ 0.63
PCNX1-202ENST00000439984 GSE1Q14687 1217 aa18.95■□□□□ 0.62
PCNX1-202ENST00000439984 IL27Q8NEV9 243 aa18.95■□□□□ 0.62
PCNX1-202ENST00000439984 GOLGA6L3A6NEY3 463 aa18.94■□□□□ 0.62
PCNX1-202ENST00000439984 MYH16Q9H6N6 1097 aa18.94■□□□□ 0.62
PCNX1-202ENST00000439984 SLC4A3P48751 1232 aa18.93■□□□□ 0.62
PCNX1-202ENST00000439984 A0A0U1RQG5 324 aaPredicted RBP18.92■□□□□ 0.62
PCNX1-202ENST00000439984 SMARCA4P51532 1647 aa18.92■□□□□ 0.62
PCNX1-202ENST00000439984 TCERG1O14776 1098 aaKnown RBP18.91■□□□□ 0.62
PCNX1-202ENST00000439984 FRAT1Q92837 279 aaPredicted RBP18.91■□□□□ 0.62
PCNX1-202ENST00000439984 RUSC2Q8N2Y8 1516 aa18.9■□□□□ 0.62
PCNX1-202ENST00000439984 HSCBQ8IWL3 235 aa18.9■□□□□ 0.62
PCNX1-202ENST00000439984 USP35Q9P2H5 1018 aa18.89■□□□□ 0.61
PCNX1-202ENST00000439984 VPS8Q8N3P4 1428 aa18.88■□□□□ 0.61
PCNX1-202ENST00000439984 CHAF1AQ13111 956 aaPredicted RBP18.87■□□□□ 0.61
PCNX1-202ENST00000439984 SMARCA2P51531 1590 aa18.85■□□□□ 0.61
PCNX1-202ENST00000439984 NEUROD2Q15784 382 aa18.85■□□□□ 0.61
PCNX1-202ENST00000439984 KANK4Q5T7N3 995 aaPredicted RBP18.85■□□□□ 0.61
PCNX1-202ENST00000439984 FTSJ3Q8IY81 847 aaKnown RBP18.84■□□□□ 0.61
PCNX1-202ENST00000439984 CUX2O14529 1486 aa18.83■□□□□ 0.6
PCNX1-202ENST00000439984 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.8■□□□□ 0.62e-6■□□□□ 9.8
PCNX1-202ENST00000439984 CHGAP10645 457 aaKnown RBP18.79■□□□□ 0.6
PCNX1-202ENST00000439984 CARMIL1Q5VZK9 1371 aa18.79■□□□□ 0.6
PCNX1-202ENST00000439984 CC2D1BQ5T0F9 858 aaKnown RBP18.78■□□□□ 0.6
PCNX1-202ENST00000439984 BRPF3Q9ULD4 1205 aa18.78■□□□□ 0.6
PCNX1-202ENST00000439984 CCNB3Q8WWL7 1395 aa18.78■□□□□ 0.6
PCNX1-202ENST00000439984 TNNT3P45378 269 aaPredicted RBP18.77■□□□□ 0.6
PCNX1-202ENST00000439984 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.6
PCNX1-202ENST00000439984 PODXL2Q9NZ53 605 aa18.77■□□□□ 0.6
PCNX1-202ENST00000439984 RCAN3Q9UKA8 241 aa18.77■□□□□ 0.6
PCNX1-202ENST00000439984 HSPA5P11021 654 aaKnown RBP18.75■□□□□ 0.59
PCNX1-202ENST00000439984 RAPGEF2Q9Y4G8 1499 aa18.75■□□□□ 0.59
PCNX1-202ENST00000439984 PDE4AP27815 886 aa18.75■□□□□ 0.59
PCNX1-202ENST00000439984 CARD11Q9BXL7 1154 aa18.73■□□□□ 0.59
PCNX1-202ENST00000439984 CASC1Q6TDU7 716 aa18.73■□□□□ 0.59
PCNX1-202ENST00000439984 GBP4Q96PP9 640 aa18.72■□□□□ 0.59
PCNX1-202ENST00000439984 ZRSR1Q15695 479 aaKnown RBP18.72■□□□□ 0.59
PCNX1-202ENST00000439984 NUDCQ9Y266 331 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms