RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 PCF11O94913 1555 aaKnown RBP15.64■□□□□ 0.09
CPNE1-218ENST00000439806 DNAJC5BQ9UF47 199 aa15.64■□□□□ 0.09
CPNE1-218ENST00000439806 PBRM1Q86U86 1689 aa15.63■□□□□ 0.09
CPNE1-218ENST00000439806 RRBP1Q9P2E9 1410 aaKnown RBP15.62■□□□□ 0.09
CPNE1-218ENST00000439806 TARBP1Q13395 1621 aaKnown RBP15.62■□□□□ 0.09
CPNE1-218ENST00000439806 MRC2Q9UBG0 1479 aa15.6■□□□□ 0.09
CPNE1-218ENST00000439806 TDRD9Q8NDG6 1382 aaKnown RBP15.6■□□□□ 0.09
CPNE1-218ENST00000439806 FHOD3Q2V2M9 1422 aa15.57■□□□□ 0.08
CPNE1-218ENST00000439806 FYCO1Q9BQS8 1478 aa15.57■□□□□ 0.08
CPNE1-218ENST00000439806 P3H3Q8IVL6 736 aa15.56■□□□□ 0.08
CPNE1-218ENST00000439806 LRRC9Q6ZRR7 1453 aa15.56■□□□□ 0.08
CPNE1-218ENST00000439806 AQRO60306 1485 aaKnown RBP eCLIP15.55■□□□□ 0.083e-7■■■■□ 25.1
CPNE1-218ENST00000439806 CCNB3Q8WWL7 1395 aa15.55■□□□□ 0.08
CPNE1-218ENST00000439806 SAMD9Q5K651 1589 aa15.53■□□□□ 0.08
CPNE1-218ENST00000439806 CASKIN1Q8WXD9 1431 aa15.52■□□□□ 0.08
CPNE1-218ENST00000439806 FMN1Q68DA7 1419 aa15.51■□□□□ 0.07
CPNE1-218ENST00000439806 ADAMTS12P58397 1594 aa15.5■□□□□ 0.07
CPNE1-218ENST00000439806 ATP1B4Q9UN42 357 aaPredicted RBP15.5■□□□□ 0.07
CPNE1-218ENST00000439806 WDR62O43379 1518 aa15.48■□□□□ 0.07
CPNE1-218ENST00000439806 IFT140Q96RY7 1462 aa15.46■□□□□ 0.07
CPNE1-218ENST00000439806 CLSPNQ9HAW4 1339 aa15.45■□□□□ 0.06
CPNE1-218ENST00000439806 THOC2Q8NI27 1593 aaKnown RBP15.45■□□□□ 0.06
CPNE1-218ENST00000439806 DHX57Q6P158 1386 aaKnown RBP15.45■□□□□ 0.06
CPNE1-218ENST00000439806 GRIN2BQ13224 1484 aa15.45■□□□□ 0.06
CPNE1-218ENST00000439806 SNAPC4Q5SXM2 1469 aa15.45■□□□□ 0.06
CPNE1-218ENST00000439806 LRRIQ1Q96JM4 1722 aa15.43■□□□□ 0.06
CPNE1-218ENST00000439806 IQGAP2Q13576 1575 aa15.43■□□□□ 0.06
CPNE1-218ENST00000439806 PHLDB1Q86UU1 1377 aa15.42■□□□□ 0.06
CPNE1-218ENST00000439806 ZNF316A6NFI3 1004 aaPredicted RBP15.42■□□□□ 0.06
CPNE1-218ENST00000439806 ITGAEP38570 1179 aa15.42■□□□□ 0.06
CPNE1-218ENST00000439806 ERCC6Q03468 1493 aa15.4■□□□□ 0.06
CPNE1-218ENST00000439806 DIEXFQ68CQ4 756 aaKnown RBP15.4■□□□□ 0.06
CPNE1-218ENST00000439806 HECW1Q76N89 1606 aa15.38■□□□□ 0.05
CPNE1-218ENST00000439806 SUPT6HQ7KZ85 1726 aaKnown RBP15.37■□□□□ 0.05
CPNE1-218ENST00000439806 EIF4G3O43432 1585 aaKnown RBP15.37■□□□□ 0.05
CPNE1-218ENST00000439806 FAM50AQ14320 339 aaKnown RBP15.37■□□□□ 0.05
CPNE1-218ENST00000439806 EHBP1L1Q8N3D4 1523 aa15.37■□□□□ 0.05
CPNE1-218ENST00000439806 MTUS2Q5JR59 1369 aa15.36■□□□□ 0.05
CPNE1-218ENST00000439806 ZNF608Q9ULD9 1512 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-218ENST00000439806 SETD5Q9C0A6 1442 aa15.34■□□□□ 0.05
CPNE1-218ENST00000439806 CCDC18Q5T9S5 1454 aa15.34■□□□□ 0.05
CPNE1-218ENST00000439806 RAB3GAP2Q9H2M9 1393 aa15.34■□□□□ 0.05
CPNE1-218ENST00000439806 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.33■□□□□ 0.047e-10■■□□□ 13.2
CPNE1-218ENST00000439806 UGGT2Q9NYU1 1516 aa15.32■□□□□ 0.04
CPNE1-218ENST00000439806 FGD6Q6ZV73 1430 aa15.31■□□□□ 0.04
CPNE1-218ENST00000439806 NCOA2Q15596 1464 aa15.28■□□□□ 0.04
CPNE1-218ENST00000439806 KIAA0556O60303 1618 aa15.28■□□□□ 0.04
CPNE1-218ENST00000439806 KIAA0586Q9BVV6 1533 aa15.27■□□□□ 0.04
CPNE1-218ENST00000439806 GRIN2AQ12879 1464 aa15.27■□□□□ 0.04
CPNE1-218ENST00000439806 MAGI1Q96QZ7 1491 aaPredicted RBP15.27■□□□□ 0.03
CPNE1-218ENST00000439806 MYOM3Q5VTT5 1437 aa15.26■□□□□ 0.03
CPNE1-218ENST00000439806 PTPN23Q9H3S7 1636 aa15.25■□□□□ 0.03
CPNE1-218ENST00000439806 MAPKBP1O60336 1514 aa15.24■□□□□ 0.03
CPNE1-218ENST00000439806 EPRSP07814 1512 aaKnown RBP15.23■□□□□ 0.03
CPNE1-218ENST00000439806 MAGI3Q5TCQ9 1506 aa15.22■□□□□ 0.03
CPNE1-218ENST00000439806 ARHGEF11O15085 1522 aa15.22■□□□□ 0.03
CPNE1-218ENST00000439806 RAPGEF6Q8TEU7 1601 aa15.21■□□□□ 0.02
CPNE1-218ENST00000439806 CDK13Q14004 1512 aaKnown RBP15.2■□□□□ 0.02
CPNE1-218ENST00000439806 SYNJ2O15056 1496 aa15.2■□□□□ 0.02
CPNE1-218ENST00000439806 DISP1Q96F81 1524 aa15.19■□□□□ 0.02
CPNE1-218ENST00000439806 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
CPNE1-218ENST00000439806 TCOF1Q13428 1488 aaKnown RBP15.16■□□□□ 0.02
CPNE1-218ENST00000439806 CHMP7Q8WUX9 453 aaPredicted RBP15.16■□□□□ 0.02
CPNE1-218ENST00000439806 GCC2Q8IWJ2 1684 aa15.16■□□□□ 0.02
CPNE1-218ENST00000439806 CENPBP07199 599 aaPredicted RBP15.14■□□□□ 0.01
CPNE1-218ENST00000439806 HFM1A2PYH4 1435 aa15.14■□□□□ 0.01
CPNE1-218ENST00000439806 MIA2Q96PC5 1412 aa15.12■□□□□ 0.01
CPNE1-218ENST00000439806 PTPRKQ15262 1439 aa15.11■□□□□ 0.01
CPNE1-218ENST00000439806 NUP160Q12769 1436 aa15.1■□□□□ 0.01
CPNE1-218ENST00000439806 CARMIL2Q6F5E8 1435 aa15.1■□□□□ 0.01
CPNE1-218ENST00000439806 NUP153P49790 1475 aaKnown RBP15.1■□□□□ 0.01
CPNE1-218ENST00000439806 ARID3CA6NKF2 412 aa15.09■□□□□ 0.01
CPNE1-218ENST00000439806 FBLN2P98095 1184 aa15.09■□□□□ 0.01
CPNE1-218ENST00000439806 NAIPQ13075 1403 aa15.09■□□□□ 0.01
CPNE1-218ENST00000439806 UACAQ9BZF9 1416 aa15.09■□□□□ 0.01
CPNE1-218ENST00000439806 ITSN2Q9NZM3 1697 aa15.08■□□□□ 0
CPNE1-218ENST00000439806 ACIN1Q9UKV3 1341 aaKnown RBP15.08■□□□□ 0
CPNE1-218ENST00000439806 NEUROD1Q13562 356 aa15.07■□□□□ 0
CPNE1-218ENST00000439806 MIER1Q8N108 512 aa15.07■□□□□ 0
CPNE1-218ENST00000439806 TIMELESSQ9UNS1 1208 aa15.06■□□□□ 0
CPNE1-218ENST00000439806 CDK11AQ9UQ88 783 aaPredicted RBP15.06■□□□□ 0
CPNE1-218ENST00000439806 AKNAQ7Z591 1439 aa15.06■□□□□ 0
CPNE1-218ENST00000439806 SIN3AQ96ST3 1273 aa15.05■□□□□ -0
CPNE1-218ENST00000439806 ADCY10Q96PN6 1610 aa15.05■□□□□ -0
CPNE1-218ENST00000439806 DNMT1P26358 1616 aaKnown RBP15.03■□□□□ -0
CPNE1-218ENST00000439806 TROQ12816 1431 aaPredicted RBP15.02■□□□□ -0
CPNE1-218ENST00000439806 SCAF1Q9H7N4 1312 aaKnown RBP15.02■□□□□ -0
CPNE1-218ENST00000439806 CHD1O14646 1710 aa15.02□□□□□ -0.01
CPNE1-218ENST00000439806 JPH4Q96JJ6 628 aa15.01□□□□□ -0.01
CPNE1-218ENST00000439806 PLB1Q6P1J6 1458 aa15.01□□□□□ -0.01
CPNE1-218ENST00000439806 RRP7BPQ9NSQ0 103 aa15□□□□□ -0.01
CPNE1-218ENST00000439806 TONSLQ96HA7 1378 aa14.99□□□□□ -0.01
CPNE1-218ENST00000439806 ABCA8O94911 1581 aa14.99□□□□□ -0.01
CPNE1-218ENST00000439806 CHIC2Q9UKJ5 165 aa14.99□□□□□ -0.01
CPNE1-218ENST00000439806 ADGBQ8N7X0 1667 aa14.99□□□□□ -0.01
CPNE1-218ENST00000439806 DAPK1P53355 1430 aa14.99□□□□□ -0.01
CPNE1-218ENST00000439806 KIF14Q15058 1648 aa14.97□□□□□ -0.01
CPNE1-218ENST00000439806 YTHDC1Q96MU7 727 aaKnown RBP14.97□□□□□ -0.01
CPNE1-218ENST00000439806 KDM6BO15054 1643 aa14.96□□□□□ -0.01
CPNE1-218ENST00000439806 PRG4Q92954 1404 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms