RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 CEP170Q5SW79 1584 aa12.11□□□□□ -0.47
UBR3-205ENST00000439681 KIAA0586Q9BVV6 1533 aa12.1□□□□□ -0.47
UBR3-205ENST00000439681 CHD1O14646 1710 aa12.09□□□□□ -0.47
UBR3-205ENST00000439681 RANGAP1P46060 587 aaPredicted RBP12.06□□□□□ -0.48
UBR3-205ENST00000439681 JPH4Q96JJ6 628 aa12.06□□□□□ -0.48
UBR3-205ENST00000439681 CLASP1Q7Z460 1538 aa12.04□□□□□ -0.48
UBR3-205ENST00000439681 CEP162Q5TB80 1403 aa12.03□□□□□ -0.48
UBR3-205ENST00000439681 IQGAP2Q13576 1575 aa12.03□□□□□ -0.48
UBR3-205ENST00000439681 CLIP1P30622 1438 aa12.01□□□□□ -0.49
UBR3-205ENST00000439681 UGGT2Q9NYU1 1516 aa12.01□□□□□ -0.49
UBR3-205ENST00000439681 AEBP2Q6ZN18 517 aaPredicted RBP12.01□□□□□ -0.49
UBR3-205ENST00000439681 CTTNBP2Q8WZ74 1663 aa12□□□□□ -0.49
UBR3-205ENST00000439681 P3H3Q8IVL6 736 aa11.99□□□□□ -0.49
UBR3-205ENST00000439681 ARHGAP35Q9NRY4 1499 aa11.99□□□□□ -0.49
UBR3-205ENST00000439681 PRG4Q92954 1404 aaPredicted RBP11.98□□□□□ -0.49
UBR3-205ENST00000439681 DISP1Q96F81 1524 aa11.98□□□□□ -0.49
UBR3-205ENST00000439681 SHROOM2Q13796 1616 aa11.96□□□□□ -0.5
UBR3-205ENST00000439681 ARAP1Q96P48 1450 aa11.94□□□□□ -0.5
UBR3-205ENST00000439681 CARMIL2Q6F5E8 1435 aa11.94□□□□□ -0.5
UBR3-205ENST00000439681 POTEDQ86YR6 584 aa11.94□□□□□ -0.5
UBR3-205ENST00000439681 SAMD9Q5K651 1589 aa11.94□□□□□ -0.5
UBR3-205ENST00000439681 EFCAB5A4FU69 1503 aa11.94□□□□□ -0.5
UBR3-205ENST00000439681 FHOD3Q2V2M9 1422 aa11.94□□□□□ -0.5
UBR3-205ENST00000439681 ERCC6L2Q5T890 1561 aa11.93□□□□□ -0.5
UBR3-205ENST00000439681 KIAA0556O60303 1618 aa11.91□□□□□ -0.5
UBR3-205ENST00000439681 TTBK1Q5TCY1 1321 aaPredicted RBP11.89□□□□□ -0.51
UBR3-205ENST00000439681 PTPRGP23470 1445 aa11.89□□□□□ -0.51
UBR3-205ENST00000439681 VPS8Q8N3P4 1428 aa11.86□□□□□ -0.51
UBR3-205ENST00000439681 ARHGEF11O15085 1522 aa11.86□□□□□ -0.51
UBR3-205ENST00000439681 FMN1Q68DA7 1419 aa11.85□□□□□ -0.51
UBR3-205ENST00000439681 DNAJC5Q9H3Z4 198 aa11.84□□□□□ -0.51
UBR3-205ENST00000439681 PLB1Q6P1J6 1458 aa11.82□□□□□ -0.52
UBR3-205ENST00000439681 CASKIN1Q8WXD9 1431 aa11.82□□□□□ -0.52
UBR3-205ENST00000439681 UACAQ9BZF9 1416 aa11.8□□□□□ -0.52
UBR3-205ENST00000439681 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
UBR3-205ENST00000439681 RIMBP3CA6NJZ7 1639 aa11.8□□□□□ -0.52
UBR3-205ENST00000439681 RIMBP3BA6NNM3 1639 aa11.8□□□□□ -0.52
UBR3-205ENST00000439681 RIMBP3Q9UFD9 1639 aa11.8□□□□□ -0.52
UBR3-205ENST00000439681 CYB5RLQ6IPT4 315 aa11.79□□□□□ -0.52
UBR3-205ENST00000439681 ABCA8O94911 1581 aa11.79□□□□□ -0.52
UBR3-205ENST00000439681 FYCO1Q9BQS8 1478 aa11.77□□□□□ -0.53
UBR3-205ENST00000439681 PCF11O94913 1555 aaKnown RBP11.77□□□□□ -0.53
UBR3-205ENST00000439681 NUP153P49790 1475 aaKnown RBP11.77□□□□□ -0.53
UBR3-205ENST00000439681 ARID3CA6NKF2 412 aa11.77□□□□□ -0.53
UBR3-205ENST00000439681 UHRF1BP1LA0JNW5 1464 aa11.76□□□□□ -0.53
UBR3-205ENST00000439681 RAPGEF6Q8TEU7 1601 aa11.75□□□□□ -0.53
UBR3-205ENST00000439681 ABCC2Q92887 1545 aa11.74□□□□□ -0.53
UBR3-205ENST00000439681 ATP10BO94823 1461 aa11.74□□□□□ -0.53
UBR3-205ENST00000439681 EPRSP07814 1512 aaKnown RBP11.73□□□□□ -0.53
UBR3-205ENST00000439681 APLP2Q06481 763 aa11.72□□□□□ -0.53
UBR3-205ENST00000439681 KANK4Q5T7N3 995 aaPredicted RBP11.72□□□□□ -0.53
UBR3-205ENST00000439681 HECW1Q76N89 1606 aa11.71□□□□□ -0.53
UBR3-205ENST00000439681 ADCY10Q96PN6 1610 aa11.71□□□□□ -0.53
UBR3-205ENST00000439681 MAP3K1Q13233 1512 aa11.7□□□□□ -0.54
UBR3-205ENST00000439681 CDK13Q14004 1512 aaKnown RBP11.7□□□□□ -0.54
UBR3-205ENST00000439681 KDM5BQ9UGL1 1544 aa11.7□□□□□ -0.54
UBR3-205ENST00000439681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
UBR3-205ENST00000439681 HNRNPUL2Q1KMD3 747 aaKnown RBP11.7□□□□□ -0.54
UBR3-205ENST00000439681 PPARGC1BQ86YN6 1023 aaKnown RBP11.69□□□□□ -0.54
UBR3-205ENST00000439681 CCDC18Q5T9S5 1454 aa11.69□□□□□ -0.54
UBR3-205ENST00000439681 NPM1P06748 294 aaKnown RBP eCLIP11.68□□□□□ -0.54
UBR3-205ENST00000439681 TIAM1Q13009 1591 aa11.67□□□□□ -0.54
UBR3-205ENST00000439681 PLEKHD1A6NEE1 506 aa11.67□□□□□ -0.54
UBR3-205ENST00000439681 CDK11AQ9UQ88 783 aaPredicted RBP11.67□□□□□ -0.54
UBR3-205ENST00000439681 LRRC9Q6ZRR7 1453 aa11.66□□□□□ -0.54
UBR3-205ENST00000439681 LRRIQ1Q96JM4 1722 aa11.66□□□□□ -0.54
UBR3-205ENST00000439681 MAGI3Q5TCQ9 1506 aa11.65□□□□□ -0.54
UBR3-205ENST00000439681 MTUS2Q5JR59 1369 aa11.64□□□□□ -0.55
UBR3-205ENST00000439681 ZCCHC11Q5TAX3 1644 aaKnown RBP11.63□□□□□ -0.55
UBR3-205ENST00000439681 TROQ12816 1431 aaPredicted RBP11.63□□□□□ -0.55
UBR3-205ENST00000439681 CFAP43Q8NDM7 1665 aa11.62□□□□□ -0.55
UBR3-205ENST00000439681 ASXL2Q76L83 1435 aa11.62□□□□□ -0.55
UBR3-205ENST00000439681 KCNH8Q96L42 1107 aa11.61□□□□□ -0.55
UBR3-205ENST00000439681 WDR7Q9Y4E6 1490 aa11.59□□□□□ -0.55
UBR3-205ENST00000439681 EHBP1L1Q8N3D4 1523 aa11.59□□□□□ -0.55
UBR3-205ENST00000439681 MAPKBP1O60336 1514 aa11.58□□□□□ -0.56
UBR3-205ENST00000439681 NCOA2Q15596 1464 aa11.56□□□□□ -0.56
UBR3-205ENST00000439681 PHLDB1Q86UU1 1377 aa11.56□□□□□ -0.56
UBR3-205ENST00000439681 ABCC10Q5T3U5 1492 aa11.55□□□□□ -0.56
UBR3-205ENST00000439681 KIF14Q15058 1648 aa11.54□□□□□ -0.56
UBR3-205ENST00000439681 CCNB3Q8WWL7 1395 aa11.52□□□□□ -0.56
UBR3-205ENST00000439681 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.52□□□□□ -0.56
UBR3-205ENST00000439681 GPATCH8Q9UKJ3 1502 aaKnown RBP11.52□□□□□ -0.57
UBR3-205ENST00000439681 FAM69CQ0P6D2 419 aa11.51□□□□□ -0.57
UBR3-205ENST00000439681 SUPT6HQ7KZ85 1726 aaKnown RBP11.51□□□□□ -0.57
UBR3-205ENST00000439681 MYOM3Q5VTT5 1437 aa11.5□□□□□ -0.57
UBR3-205ENST00000439681 CFDP1Q9UEE9 299 aaPredicted RBP11.49□□□□□ -0.57
UBR3-205ENST00000439681 PLCH2O75038 1416 aa11.49□□□□□ -0.57
UBR3-205ENST00000439681 TTC37Q6PGP7 1564 aa11.48□□□□□ -0.57
UBR3-205ENST00000439681 GLI2P10070 1586 aa11.47□□□□□ -0.57
UBR3-205ENST00000439681 CD109Q6YHK3 1445 aa11.47□□□□□ -0.57
UBR3-205ENST00000439681 FGD6Q6ZV73 1430 aa11.47□□□□□ -0.57
UBR3-205ENST00000439681 ZNF644Q9H582 1327 aaPredicted RBP11.47□□□□□ -0.57
UBR3-205ENST00000439681 ABCA9Q8IUA7 1624 aa11.47□□□□□ -0.57
UBR3-205ENST00000439681 MIA2Q96PC5 1412 aa11.47□□□□□ -0.57
UBR3-205ENST00000439681 RRBP1Q9P2E9 1410 aaKnown RBP11.47□□□□□ -0.57
UBR3-205ENST00000439681 DIP2BQ9P265 1576 aa11.46□□□□□ -0.57
UBR3-205ENST00000439681 EFCAB2Q5VUJ9 269 aa11.45□□□□□ -0.58
UBR3-205ENST00000439681 TRIM26Q12899 539 aaPredicted RBP11.45□□□□□ -0.58
UBR3-205ENST00000439681 ZNF777Q9ULD5 760 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms