RNA–Protein interactions for RNA: ENST00000439338.5

UBE2F-212, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-212ENST00000439338 JPH4Q96JJ6 628 aa34.8■■■■□ 3.16
UBE2F-212ENST00000439338 KIAA0586Q9BVV6 1533 aa34.79■■■■□ 3.16
UBE2F-212ENST00000439338 PRG4Q92954 1404 aaPredicted RBP34.79■■■■□ 3.16
UBE2F-212ENST00000439338 RAPGEF2Q9Y4G8 1499 aa34.71■■■■□ 3.15
UBE2F-212ENST00000439338 IQGAP2Q13576 1575 aa34.6■■■■□ 3.13
UBE2F-212ENST00000439338 PRXQ9BXM0 1461 aa34.53■■■■□ 3.12
UBE2F-212ENST00000439338 TRHP20396 242 aaPredicted RBP34.47■■■■□ 3.11
UBE2F-212ENST00000439338 CTTNBP2Q8WZ74 1663 aa34.45■■■■□ 3.11
UBE2F-212ENST00000439338 EEA1Q15075 1411 aa34.42■■■■□ 3.1
UBE2F-212ENST00000439338 CARMIL2Q6F5E8 1435 aa34.42■■■■□ 3.1
UBE2F-212ENST00000439338 CHIC1Q5VXU3 224 aa34.42■■■■□ 3.1
UBE2F-212ENST00000439338 CSRNP3Q8WYN3 585 aa34.41■■■■□ 3.1
UBE2F-212ENST00000439338 UGGT2Q9NYU1 1516 aa34.39■■■■□ 3.1
UBE2F-212ENST00000439338 DISP1Q96F81 1524 aa34.36■■■■□ 3.09
UBE2F-212ENST00000439338 TNIKQ9UKE5 1360 aa34.34■■■■□ 3.09
UBE2F-212ENST00000439338 ADCY10Q96PN6 1610 aa34.33■■■■□ 3.09
UBE2F-212ENST00000439338 PTPRGP23470 1445 aa34.32■■■■□ 3.08
UBE2F-212ENST00000439338 TTBK1Q5TCY1 1321 aaPredicted RBP34.3■■■■□ 3.08
UBE2F-212ENST00000439338 FAM9AQ8IZU1 332 aaPredicted RBP34.29■■■■□ 3.08
UBE2F-212ENST00000439338 KIAA0556O60303 1618 aa34.29■■■■□ 3.08
UBE2F-212ENST00000439338 NPM1P06748 294 aaKnown RBP eCLIP34.18■■■■□ 3.06
UBE2F-212ENST00000439338 GOLGA3Q08378 1498 aa34.16■■■■□ 3.06
UBE2F-212ENST00000439338 KIF21BO75037 1637 aa34.13■■■■□ 3.05
UBE2F-212ENST00000439338 MAPKBP1O60336 1514 aa34.13■■■■□ 3.05
UBE2F-212ENST00000439338 UACAQ9BZF9 1416 aa34.1■■■■□ 3.05
UBE2F-212ENST00000439338 UHRF1BP1LA0JNW5 1464 aa34.08■■■■□ 3.05
UBE2F-212ENST00000439338 KIF13AQ9H1H9 1805 aa34.08■■■■□ 3.05
UBE2F-212ENST00000439338 ABCC2Q92887 1545 aa34.07■■■■□ 3.04
UBE2F-212ENST00000439338 ABCC10Q5T3U5 1492 aa34■■■■□ 3.03
UBE2F-212ENST00000439338 SAMD9Q5K651 1589 aa33.98■■■■□ 3.03
UBE2F-212ENST00000439338 DIP2BQ9P265 1576 aa33.98■■■■□ 3.03
UBE2F-212ENST00000439338 PLB1Q6P1J6 1458 aa33.95■■■■□ 3.03
UBE2F-212ENST00000439338 P3H3Q8IVL6 736 aa33.93■■■■□ 3.02
UBE2F-212ENST00000439338 KDM5BQ9UGL1 1544 aa33.93■■■■□ 3.02
UBE2F-212ENST00000439338 FAM69CQ0P6D2 419 aa33.92■■■■□ 3.02
UBE2F-212ENST00000439338 ABCA8O94911 1581 aa33.92■■■■□ 3.02
UBE2F-212ENST00000439338 ZCCHC11Q5TAX3 1644 aaKnown RBP33.9■■■■□ 3.02
UBE2F-212ENST00000439338 EHMT2Q96KQ7 1210 aa33.89■■■■□ 3.02
UBE2F-212ENST00000439338 ASXL2Q76L83 1435 aa33.87■■■■□ 3.01
UBE2F-212ENST00000439338 RANGAP1P46060 587 aaPredicted RBP33.87■■■■□ 3.01
UBE2F-212ENST00000439338 UBTFP17480 764 aaKnown RBP33.8■■■■□ 3
UBE2F-212ENST00000439338 FHOD3Q2V2M9 1422 aa33.78■■■■□ 3
UBE2F-212ENST00000439338 EFCAB5A4FU69 1503 aa33.77■■■■□ 3
UBE2F-212ENST00000439338 TSPOAP1O95153 1857 aa33.73■■■□□ 2.99
UBE2F-212ENST00000439338 GLI2P10070 1586 aa33.72■■■□□ 2.99
UBE2F-212ENST00000439338 RAPGEF6Q8TEU7 1601 aa33.7■■■□□ 2.99
UBE2F-212ENST00000439338 EPRSP07814 1512 aaKnown RBP33.69■■■□□ 2.98
UBE2F-212ENST00000439338 WDR7Q9Y4E6 1490 aa33.68■■■□□ 2.98
UBE2F-212ENST00000439338 ARID3CA6NKF2 412 aa33.64■■■□□ 2.98
UBE2F-212ENST00000439338 ATP10BO94823 1461 aa33.61■■■□□ 2.97
UBE2F-212ENST00000439338 PPRC1Q5VV67 1664 aaKnown RBP33.58■■■□□ 2.97
UBE2F-212ENST00000439338 MAP3K4Q9Y6R4 1608 aa33.57■■■□□ 2.96
UBE2F-212ENST00000439338 ARHGAP35Q9NRY4 1499 aa33.56■■■□□ 2.96
UBE2F-212ENST00000439338 NUP153P49790 1475 aaKnown RBP33.56■■■□□ 2.96
UBE2F-212ENST00000439338 KCNH8Q96L42 1107 aa33.49■■■□□ 2.95
UBE2F-212ENST00000439338 KDM6BO15054 1643 aa33.49■■■□□ 2.95
UBE2F-212ENST00000439338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.44■■■□□ 2.94
UBE2F-212ENST00000439338 HNRNPUL2Q1KMD3 747 aaKnown RBP33.44■■■□□ 2.94
UBE2F-212ENST00000439338 CFAP43Q8NDM7 1665 aa33.44■■■□□ 2.94
UBE2F-212ENST00000439338 FMN1Q68DA7 1419 aa33.43■■■□□ 2.94
UBE2F-212ENST00000439338 TEX14Q8IWB6 1497 aa33.4■■■□□ 2.94
UBE2F-212ENST00000439338 CD109Q6YHK3 1445 aa33.37■■■□□ 2.93
UBE2F-212ENST00000439338 HECW1Q76N89 1606 aa33.34■■■□□ 2.93
UBE2F-212ENST00000439338 CDK13Q14004 1512 aaKnown RBP33.33■■■□□ 2.93
UBE2F-212ENST00000439338 MAGI3Q5TCQ9 1506 aa33.33■■■□□ 2.93
UBE2F-212ENST00000439338 ABCA9Q8IUA7 1624 aa33.31■■■□□ 2.92
UBE2F-212ENST00000439338 CLIP1P30622 1438 aa33.28■■■□□ 2.92
UBE2F-212ENST00000439338 ATP1B4Q9UN42 357 aaPredicted RBP33.27■■■□□ 2.92
UBE2F-212ENST00000439338 PLEKHD1A6NEE1 506 aa33.26■■■□□ 2.91
UBE2F-212ENST00000439338 COL17A1Q9UMD9 1497 aaPredicted RBP33.25■■■□□ 2.91
UBE2F-212ENST00000439338 PCF11O94913 1555 aaKnown RBP33.21■■■□□ 2.91
UBE2F-212ENST00000439338 LRRIQ1Q96JM4 1722 aa33.19■■■□□ 2.9
UBE2F-212ENST00000439338 CASKIN1Q8WXD9 1431 aa33.15■■■□□ 2.9
UBE2F-212ENST00000439338 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.12■■■□□ 2.892e-6■■■□□ 16.6
UBE2F-212ENST00000439338 TTC37Q6PGP7 1564 aa33.11■■■□□ 2.89
UBE2F-212ENST00000439338 CEP162Q5TB80 1403 aa33.08■■■□□ 2.89
UBE2F-212ENST00000439338 FYCO1Q9BQS8 1478 aa33.07■■■□□ 2.88
UBE2F-212ENST00000439338 CDK11AQ9UQ88 783 aaPredicted RBP33.06■■■□□ 2.88
UBE2F-212ENST00000439338 CCDC18Q5T9S5 1454 aa33.05■■■□□ 2.88
UBE2F-212ENST00000439338 NEO1Q92859 1461 aa33.04■■■□□ 2.88
UBE2F-212ENST00000439338 ARAP3Q8WWN8 1544 aa33.03■■■□□ 2.88
UBE2F-212ENST00000439338 LOC105371045A0A1W2PR82 267 aa33.03■■■□□ 2.88
UBE2F-212ENST00000439338 TROQ12816 1431 aaPredicted RBP33.02■■■□□ 2.88
UBE2F-212ENST00000439338 PHLDB1Q86UU1 1377 aa33.01■■■□□ 2.88
UBE2F-212ENST00000439338 KIF14Q15058 1648 aa33.01■■■□□ 2.87
UBE2F-212ENST00000439338 CFAP74Q9C0B2 1584 aa32.96■■■□□ 2.87
UBE2F-212ENST00000439338 FANCAO15360 1455 aa32.94■■■□□ 2.86
UBE2F-212ENST00000439338 MYO5CQ9NQX4 1742 aa32.92■■■□□ 2.86
UBE2F-212ENST00000439338 AKNAQ7Z591 1439 aa32.9■■■□□ 2.86
UBE2F-212ENST00000439338 PLCH2O75038 1416 aa32.89■■■□□ 2.86
UBE2F-212ENST00000439338 AEBP2Q6ZN18 517 aaPredicted RBP32.89■■■□□ 2.86
UBE2F-212ENST00000439338 FRMPD1Q5SYB0 1578 aa32.87■■■□□ 2.85
UBE2F-212ENST00000439338 RAPGEF3O95398 923 aa32.86■■■□□ 2.85
UBE2F-212ENST00000439338 DENND4BO75064 1496 aaPredicted RBP32.81■■■□□ 2.84
UBE2F-212ENST00000439338 RICTORQ6R327 1708 aa32.8■■■□□ 2.84
UBE2F-212ENST00000439338 KDM4FA0A1W2PPD8 638 aa32.79■■■□□ 2.84
UBE2F-212ENST00000439338 ADGRL1O94910 1474 aa32.77■■■□□ 2.84
UBE2F-212ENST00000439338 ARHGAP5Q13017 1502 aa32.77■■■□□ 2.84
UBE2F-212ENST00000439338 EFCAB2Q5VUJ9 269 aa32.75■■■□□ 2.83
UBE2F-212ENST00000439338 CDC42BPBQ9Y5S2 1711 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms