RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 ANP32CO43423 234 aa25.4■■□□□ 1.66
KCNC4-204ENST00000438661 RRBP1Q9P2E9 1410 aaKnown RBP25.38■■□□□ 1.65
KCNC4-204ENST00000438661 DEKP35659 375 aaKnown RBP25.38■■□□□ 1.65
KCNC4-204ENST00000438661 FANCIQ9NVI1 1328 aa25.36■■□□□ 1.65
KCNC4-204ENST00000438661 NCAPD3P42695 1498 aa25.35■■□□□ 1.65
KCNC4-204ENST00000438661 ARHGAP35Q9NRY4 1499 aa25.34■■□□□ 1.65
KCNC4-204ENST00000438661 CCNB3Q8WWL7 1395 aa25.33■■□□□ 1.65
KCNC4-204ENST00000438661 PPP1R15AO75807 674 aaPredicted RBP25.32■■□□□ 1.64
KCNC4-204ENST00000438661 HMGXB3Q12766 1538 aa25.29■■□□□ 1.64
KCNC4-204ENST00000438661 NBR1Q14596 966 aa25.29■■□□□ 1.64
KCNC4-204ENST00000438661 HNRNPUQ00839 825 aaKnown RBP eCLIP25.26■■□□□ 1.63
KCNC4-204ENST00000438661 CFTRP13569 1480 aa25.26■■□□□ 1.63
KCNC4-204ENST00000438661 RAB3GAP2Q9H2M9 1393 aa25.26■■□□□ 1.63
KCNC4-204ENST00000438661 CCER2I3L3R5 266 aa25.23■■□□□ 1.63
KCNC4-204ENST00000438661 CUX2O14529 1486 aa25.22■■□□□ 1.63
KCNC4-204ENST00000438661 WDR97A6NE52 1622 aa25.21■■□□□ 1.63
KCNC4-204ENST00000438661 ANO8Q9HCE9 1232 aaPredicted RBP25.19■■□□□ 1.62
KCNC4-204ENST00000438661 IGF1RP08069 1367 aa25.18■■□□□ 1.62
KCNC4-204ENST00000438661 MAPKBP1O60336 1514 aa25.12■■□□□ 1.61
KCNC4-204ENST00000438661 FAM50AQ14320 339 aaKnown RBP25.11■■□□□ 1.61
KCNC4-204ENST00000438661 P3H3Q8IVL6 736 aa25.1■■□□□ 1.61
KCNC4-204ENST00000438661 MYT1LQ9UL68 1186 aa25.1■■□□□ 1.61
KCNC4-204ENST00000438661 B4GALNT3Q6L9W6 998 aa25.09■■□□□ 1.61
KCNC4-204ENST00000438661 CARMIL1Q5VZK9 1371 aa25.08■■□□□ 1.61
KCNC4-204ENST00000438661 ATP1B4Q9UN42 357 aaPredicted RBP25.07■■□□□ 1.6
KCNC4-204ENST00000438661 TIAM1Q13009 1591 aa25.06■■□□□ 1.6
KCNC4-204ENST00000438661 PHLDB1Q86UU1 1377 aa25.04■■□□□ 1.6
KCNC4-204ENST00000438661 SETD5Q9C0A6 1442 aa25.03■■□□□ 1.6
KCNC4-204ENST00000438661 PAK3O75914 559 aaPredicted RBP25.03■■□□□ 1.6
KCNC4-204ENST00000438661 NOP58Q9Y2X3 529 aaKnown RBP25.01■■□□□ 1.59
KCNC4-204ENST00000438661 LRRC9Q6ZRR7 1453 aa25.01■■□□□ 1.59
KCNC4-204ENST00000438661 PPP4R2Q9NY27 417 aa25.01■■□□□ 1.59
KCNC4-204ENST00000438661 FGD5Q6ZNL6 1462 aa24.98■■□□□ 1.59
KCNC4-204ENST00000438661 CADPSQ9ULU8 1353 aa24.96■■□□□ 1.59
KCNC4-204ENST00000438661 SALL2Q9Y467 1007 aaPredicted RBP24.96■■□□□ 1.59
KCNC4-204ENST00000438661 MAP3K1Q13233 1512 aa24.96■■□□□ 1.59
KCNC4-204ENST00000438661 RTN4Q9NQC3 1192 aaKnown RBP24.95■■□□□ 1.58
KCNC4-204ENST00000438661 CCDC136Q96JN2 1154 aa24.93■■□□□ 1.58
KCNC4-204ENST00000438661 PRDM2Q13029 1718 aa24.9■■□□□ 1.58
KCNC4-204ENST00000438661 FHAD1B1AJZ9 1412 aa24.88■■□□□ 1.57
KCNC4-204ENST00000438661 RTL5Q5HYW3 569 aaPredicted RBP24.87■■□□□ 1.57
KCNC4-204ENST00000438661 FAM9BQ8IZU0 186 aa24.87■■□□□ 1.57
KCNC4-204ENST00000438661 FHOD3Q2V2M9 1422 aa24.85■■□□□ 1.57
KCNC4-204ENST00000438661 TONSLQ96HA7 1378 aa24.85■■□□□ 1.57
KCNC4-204ENST00000438661 PCF11O94913 1555 aaKnown RBP24.84■■□□□ 1.57
KCNC4-204ENST00000438661 IL27Q8NEV9 243 aa24.84■■□□□ 1.57
KCNC4-204ENST00000438661 CCDC184Q52MB2 194 aa24.83■■□□□ 1.57
KCNC4-204ENST00000438661 TIMELESSQ9UNS1 1208 aa24.81■■□□□ 1.56
KCNC4-204ENST00000438661 RAD54L2Q9Y4B4 1467 aa24.78■■□□□ 1.56
KCNC4-204ENST00000438661 ERICH6BQ5W0A0 696 aa24.77■■□□□ 1.56
KCNC4-204ENST00000438661 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.77■■□□□ 1.56
KCNC4-204ENST00000438661 CFAP43Q8NDM7 1665 aa24.77■■□□□ 1.56
KCNC4-204ENST00000438661 CNGB1Q14028 1251 aaPredicted RBP24.75■■□□□ 1.55
KCNC4-204ENST00000438661 ANP32AP39687 249 aaKnown RBP24.75■■□□□ 1.55
KCNC4-204ENST00000438661 ZBTB47Q9UFB7 747 aaPredicted RBP24.74■■□□□ 1.55
KCNC4-204ENST00000438661 FANCD2Q9BXW9 1451 aa24.73■■□□□ 1.55
KCNC4-204ENST00000438661 SENP3-EIF4A1A0A087X0R7 540 aa24.72■■□□□ 1.55
KCNC4-204ENST00000438661 IPO9Q96P70 1041 aaKnown RBP24.68■■□□□ 1.54
KCNC4-204ENST00000438661 MRS2Q9HD23 443 aa24.68■■□□□ 1.54
KCNC4-204ENST00000438661 CASKIN1Q8WXD9 1431 aa24.67■■□□□ 1.54
KCNC4-204ENST00000438661 FYCO1Q9BQS8 1478 aa24.67■■□□□ 1.54
KCNC4-204ENST00000438661 NPM2Q86SE8 214 aaKnown RBP24.66■■□□□ 1.54
KCNC4-204ENST00000438661 WASHC2AQ641Q2 1341 aa24.65■■□□□ 1.54
KCNC4-204ENST00000438661 POLA1P09884 1462 aaPredicted RBP24.63■■□□□ 1.53
KCNC4-204ENST00000438661 HSPA5P11021 654 aaKnown RBP24.63■■□□□ 1.53
KCNC4-204ENST00000438661 ABCA10Q8WWZ4 1543 aa24.61■■□□□ 1.53
KCNC4-204ENST00000438661 FGD6Q6ZV73 1430 aa24.61■■□□□ 1.53
KCNC4-204ENST00000438661 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.6■■□□□ 1.53
KCNC4-204ENST00000438661 LAS1LQ9Y4W2 734 aaKnown RBP24.59■■□□□ 1.53
KCNC4-204ENST00000438661 EFCAB5A4FU69 1503 aa24.59■■□□□ 1.53
KCNC4-204ENST00000438661 CC2D2AQ9P2K1 1620 aa24.59■■□□□ 1.53
KCNC4-204ENST00000438661 TOPBP1Q92547 1522 aa24.59■■□□□ 1.53
KCNC4-204ENST00000438661 PTPRKQ15262 1439 aa24.58■■□□□ 1.53
KCNC4-204ENST00000438661 MTUS2Q5JR59 1369 aa24.58■■□□□ 1.53
KCNC4-204ENST00000438661 DNMBPQ6XZF7 1577 aa24.58■■□□□ 1.53
KCNC4-204ENST00000438661 AQRO60306 1485 aaKnown RBP eCLIP24.57■■□□□ 1.52
KCNC4-204ENST00000438661 NESP48681 1621 aa24.57■■□□□ 1.52
KCNC4-204ENST00000438661 CCDC18Q5T9S5 1454 aa24.56■■□□□ 1.52
KCNC4-204ENST00000438661 FMN1Q68DA7 1419 aa24.55■■□□□ 1.52
KCNC4-204ENST00000438661 ZBED9Q6R2W3 1325 aa24.52■■□□□ 1.52
KCNC4-204ENST00000438661 PRKRIP1Q9H875 184 aaPredicted RBP24.51■■□□□ 1.51
KCNC4-204ENST00000438661 NEFMP07197 916 aa24.51■■□□□ 1.51
KCNC4-204ENST00000438661 AKNAQ7Z591 1439 aa24.5■■□□□ 1.51
KCNC4-204ENST00000438661 SNAPC4Q5SXM2 1469 aa24.5■■□□□ 1.51
KCNC4-204ENST00000438661 CTTNBP2Q8WZ74 1663 aa24.5■■□□□ 1.51
KCNC4-204ENST00000438661 UACAQ9BZF9 1416 aa24.48■■□□□ 1.51
KCNC4-204ENST00000438661 HFM1A2PYH4 1435 aa24.48■■□□□ 1.51
KCNC4-204ENST00000438661 CUL7Q14999 1698 aa24.48■■□□□ 1.51
KCNC4-204ENST00000438661 TDRD9Q8NDG6 1382 aaKnown RBP24.48■■□□□ 1.51
KCNC4-204ENST00000438661 EIF4G2P78344 907 aaKnown RBP eCLIP24.48■■□□□ 1.51
KCNC4-204ENST00000438661 C11orf95C9JLR9 678 aaPredicted RBP24.46■■□□□ 1.51
KCNC4-204ENST00000438661 PTPN23Q9H3S7 1636 aa24.45■■□□□ 1.5
KCNC4-204ENST00000438661 NAIPQ13075 1403 aa24.45■■□□□ 1.5
KCNC4-204ENST00000438661 EIF5BO60841 1220 aaKnown RBP24.44■■□□□ 1.5
KCNC4-204ENST00000438661 NCOA2Q15596 1464 aa24.44■■□□□ 1.5
KCNC4-204ENST00000438661 RRP7BPQ9NSQ0 103 aa24.42■■□□□ 1.5
KCNC4-204ENST00000438661 CHIC2Q9UKJ5 165 aa24.42■■□□□ 1.5
KCNC4-204ENST00000438661 MYOM3Q5VTT5 1437 aa24.41■■□□□ 1.5
KCNC4-204ENST00000438661 POLR3GLQ9BT43 218 aa24.41■■□□□ 1.5
KCNC4-204ENST00000438661 LRRIQ1Q96JM4 1722 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms