RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 GOLGA3Q08378 1498 aa24.04■■□□□ 1.44
SKA2-202ENST00000437036 EHMT2Q96KQ7 1210 aa24.02■■□□□ 1.44
SKA2-202ENST00000437036 UBTFP17480 764 aaKnown RBP24.01■■□□□ 1.43
SKA2-202ENST00000437036 JPH4Q96JJ6 628 aa23.99■■□□□ 1.43
SKA2-202ENST00000437036 IQGAP2Q13576 1575 aa23.95■■□□□ 1.43
SKA2-202ENST00000437036 CTTNBP2Q8WZ74 1663 aa23.92■■□□□ 1.42
SKA2-202ENST00000437036 SHROOM2Q13796 1616 aa23.88■■□□□ 1.41
SKA2-202ENST00000437036 PRG4Q92954 1404 aaPredicted RBP23.88■■□□□ 1.41
SKA2-202ENST00000437036 CARMIL2Q6F5E8 1435 aa23.84■■□□□ 1.41
SKA2-202ENST00000437036 ARHGEF11O15085 1522 aa23.84■■□□□ 1.41
SKA2-202ENST00000437036 UGGT2Q9NYU1 1516 aa23.84■■□□□ 1.41
SKA2-202ENST00000437036 TNIKQ9UKE5 1360 aa23.81■■□□□ 1.4
SKA2-202ENST00000437036 LOC105371045A0A1W2PR82 267 aa23.81■■□□□ 1.4
SKA2-202ENST00000437036 RANGAP1P46060 587 aaPredicted RBP23.8■■□□□ 1.4
SKA2-202ENST00000437036 RIMBP3CA6NJZ7 1639 aa23.78■■□□□ 1.4
SKA2-202ENST00000437036 RIMBP3BA6NNM3 1639 aa23.78■■□□□ 1.4
SKA2-202ENST00000437036 RIMBP3Q9UFD9 1639 aa23.78■■□□□ 1.4
SKA2-202ENST00000437036 ERCC6L2Q5T890 1561 aa23.74■■□□□ 1.39
SKA2-202ENST00000437036 DISP1Q96F81 1524 aa23.74■■□□□ 1.39
SKA2-202ENST00000437036 KIAA0556O60303 1618 aa23.7■■□□□ 1.38
SKA2-202ENST00000437036 CYB5RLQ6IPT4 315 aa23.68■■□□□ 1.38
SKA2-202ENST00000437036 P3H3Q8IVL6 736 aa23.68■■□□□ 1.38
SKA2-202ENST00000437036 EFCAB5A4FU69 1503 aa23.68■■□□□ 1.38
SKA2-202ENST00000437036 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
SKA2-202ENST00000437036 PTPRGP23470 1445 aa23.67■■□□□ 1.38
SKA2-202ENST00000437036 TTBK1Q5TCY1 1321 aaPredicted RBP23.66■■□□□ 1.38
SKA2-202ENST00000437036 SAMD9Q5K651 1589 aa23.65■■□□□ 1.38
SKA2-202ENST00000437036 CLIP1P30622 1438 aa23.63■■□□□ 1.37
SKA2-202ENST00000437036 CEP162Q5TB80 1403 aa23.59■■□□□ 1.37
SKA2-202ENST00000437036 ARHGAP35Q9NRY4 1499 aa23.59■■□□□ 1.37
SKA2-202ENST00000437036 FHOD3Q2V2M9 1422 aa23.58■■□□□ 1.36
SKA2-202ENST00000437036 UACAQ9BZF9 1416 aa23.5■■□□□ 1.35
SKA2-202ENST00000437036 FMN1Q68DA7 1419 aa23.5■■□□□ 1.35
SKA2-202ENST00000437036 NPM1P06748 294 aaKnown RBP eCLIP23.46■■□□□ 1.35
SKA2-202ENST00000437036 UHRF1BP1LA0JNW5 1464 aa23.44■■□□□ 1.34
SKA2-202ENST00000437036 PLB1Q6P1J6 1458 aa23.44■■□□□ 1.34
SKA2-202ENST00000437036 ABCC2Q92887 1545 aa23.43■■□□□ 1.34
SKA2-202ENST00000437036 ABCA8O94911 1581 aa23.41■■□□□ 1.34
SKA2-202ENST00000437036 ADCY10Q96PN6 1610 aa23.39■■□□□ 1.33
SKA2-202ENST00000437036 ATP1B4Q9UN42 357 aaPredicted RBP23.38■■□□□ 1.33
SKA2-202ENST00000437036 RAPGEF6Q8TEU7 1601 aa23.37■■□□□ 1.33
SKA2-202ENST00000437036 CASKIN1Q8WXD9 1431 aa23.33■■□□□ 1.32
SKA2-202ENST00000437036 KDM5BQ9UGL1 1544 aa23.31■■□□□ 1.32
SKA2-202ENST00000437036 ARID3CA6NKF2 412 aa23.3■■□□□ 1.32
SKA2-202ENST00000437036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.3■■□□□ 1.32
SKA2-202ENST00000437036 HNRNPUL2Q1KMD3 747 aaKnown RBP23.3■■□□□ 1.32
SKA2-202ENST00000437036 NUP153P49790 1475 aaKnown RBP23.3■■□□□ 1.32
SKA2-202ENST00000437036 VPS8Q8N3P4 1428 aa23.29■■□□□ 1.32
SKA2-202ENST00000437036 HECW1Q76N89 1606 aa23.29■■□□□ 1.32
SKA2-202ENST00000437036 FYCO1Q9BQS8 1478 aa23.28■■□□□ 1.32
SKA2-202ENST00000437036 ATP10BO94823 1461 aa23.26■■□□□ 1.31
SKA2-202ENST00000437036 PCF11O94913 1555 aaKnown RBP23.26■■□□□ 1.31
SKA2-202ENST00000437036 ZCCHC11Q5TAX3 1644 aaKnown RBP23.23■■□□□ 1.31
SKA2-202ENST00000437036 EPRSP07814 1512 aaKnown RBP23.22■■□□□ 1.31
SKA2-202ENST00000437036 CDK11AQ9UQ88 783 aaPredicted RBP23.21■■□□□ 1.31
SKA2-202ENST00000437036 CCDC18Q5T9S5 1454 aa23.21■■□□□ 1.31
SKA2-202ENST00000437036 MAPKBP1O60336 1514 aa23.21■■□□□ 1.31
SKA2-202ENST00000437036 ASXL2Q76L83 1435 aa23.19■■□□□ 1.3
SKA2-202ENST00000437036 PLEKHD1A6NEE1 506 aa23.19■■□□□ 1.3
SKA2-202ENST00000437036 APLP2Q06481 763 aa23.16■■□□□ 1.3
SKA2-202ENST00000437036 CDK13Q14004 1512 aaKnown RBP23.16■■□□□ 1.3
SKA2-202ENST00000437036 WDR7Q9Y4E6 1490 aa23.14■■□□□ 1.29
SKA2-202ENST00000437036 TRHP20396 242 aaPredicted RBP23.12■■□□□ 1.29
SKA2-202ENST00000437036 KCNH8Q96L42 1107 aa23.1■■□□□ 1.29
SKA2-202ENST00000437036 ABCC10Q5T3U5 1492 aa23.07■■□□□ 1.28
SKA2-202ENST00000437036 FAM69CQ0P6D2 419 aa23.07■■□□□ 1.28
SKA2-202ENST00000437036 LRRIQ1Q96JM4 1722 aa23.06■■□□□ 1.28
SKA2-202ENST00000437036 TROQ12816 1431 aaPredicted RBP23.04■■□□□ 1.28
SKA2-202ENST00000437036 MAP3K1Q13233 1512 aa23.03■■□□□ 1.28
SKA2-202ENST00000437036 MTUS2Q5JR59 1369 aa23.03■■□□□ 1.28
SKA2-202ENST00000437036 TIAM1Q13009 1591 aa23.01■■□□□ 1.27
SKA2-202ENST00000437036 DIP2BQ9P265 1576 aa23■■□□□ 1.27
SKA2-202ENST00000437036 GLI2P10070 1586 aa22.98■■□□□ 1.27
SKA2-202ENST00000437036 CFAP43Q8NDM7 1665 aa22.98■■□□□ 1.27
SKA2-202ENST00000437036 EHBP1L1Q8N3D4 1523 aa22.95■■□□□ 1.26
SKA2-202ENST00000437036 MAGI3Q5TCQ9 1506 aa22.94■■□□□ 1.26
SKA2-202ENST00000437036 KIF14Q15058 1648 aa22.93■■□□□ 1.26
SKA2-202ENST00000437036 LRRC9Q6ZRR7 1453 aa22.93■■□□□ 1.26
SKA2-202ENST00000437036 CD109Q6YHK3 1445 aa22.91■■□□□ 1.26
SKA2-202ENST00000437036 KANK4Q5T7N3 995 aaPredicted RBP22.91■■□□□ 1.26
SKA2-202ENST00000437036 KIF13AQ9H1H9 1805 aa22.91■■□□□ 1.26
SKA2-202ENST00000437036 ABCA9Q8IUA7 1624 aa22.89■■□□□ 1.25
SKA2-202ENST00000437036 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.88■■□□□ 1.25
SKA2-202ENST00000437036 MAP3K4Q9Y6R4 1608 aa22.85■■□□□ 1.25
SKA2-202ENST00000437036 CCNB3Q8WWL7 1395 aa22.83■■□□□ 1.25
SKA2-202ENST00000437036 TTC37Q6PGP7 1564 aa22.83■■□□□ 1.25
SKA2-202ENST00000437036 SUPT6HQ7KZ85 1726 aaKnown RBP22.82■■□□□ 1.24
SKA2-202ENST00000437036 TEX14Q8IWB6 1497 aa22.82■■□□□ 1.24
SKA2-202ENST00000437036 NCOA2Q15596 1464 aa22.81■■□□□ 1.24
SKA2-202ENST00000437036 PLCH2O75038 1416 aa22.8■■□□□ 1.24
SKA2-202ENST00000437036 TSPOAP1O95153 1857 aa22.78■■□□□ 1.24
SKA2-202ENST00000437036 EFCAB2Q5VUJ9 269 aa22.78■■□□□ 1.24
SKA2-202ENST00000437036 MYO5CQ9NQX4 1742 aa22.75■■□□□ 1.23
SKA2-202ENST00000437036 PPARGC1BQ86YN6 1023 aaKnown RBP22.75■■□□□ 1.23
SKA2-202ENST00000437036 CFDP1Q9UEE9 299 aaPredicted RBP22.75■■□□□ 1.23
SKA2-202ENST00000437036 ARAP3Q8WWN8 1544 aa22.75■■□□□ 1.23
SKA2-202ENST00000437036 GPATCH8Q9UKJ3 1502 aaKnown RBP22.75■■□□□ 1.23
SKA2-202ENST00000437036 PHLDB1Q86UU1 1377 aa22.75■■□□□ 1.23
SKA2-202ENST00000437036 FANCAO15360 1455 aa22.73■■□□□ 1.23
SKA2-202ENST00000437036 ARHGAP5Q13017 1502 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms