RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 NISCHQ9Y2I1 1504 aa34.84■■■■□ 3.17
SKA2-202ENST00000437036 CCDC180Q9P1Z9 1646 aa30.76■■■□□ 2.52
SKA2-202ENST00000437036 ABCC9O60706 1549 aa29.78■■■□□ 2.36
SKA2-202ENST00000437036 ZCCHC6Q5VYS8 1495 aaKnown RBP29.09■■■□□ 2.25
SKA2-202ENST00000437036 DCAF8L2P0C7V8 631 aa29.07■■■□□ 2.24
SKA2-202ENST00000437036 NACADO15069 1562 aa28.88■■■□□ 2.21
SKA2-202ENST00000437036 DCAF1Q9Y4B6 1507 aa28.84■■■□□ 2.21
SKA2-202ENST00000437036 MYO15BQ96JP2 1530 aa28.83■■■□□ 2.21
SKA2-202ENST00000437036 RB1CC1Q8TDY2 1594 aa28.83■■■□□ 2.21
SKA2-202ENST00000437036 SCRIBQ14160 1630 aa28.11■■■□□ 2.09
SKA2-202ENST00000437036 UNC13AQ9UPW8 1703 aa28.04■■■□□ 2.08
SKA2-202ENST00000437036 PABPN1Q86U42 306 aaKnown RBP eCLIP27.93■■■□□ 2.06
SKA2-202ENST00000437036 BICRAQ9NZM4 1560 aa27.86■■■□□ 2.05
SKA2-202ENST00000437036 SHROOM4Q9ULL8 1493 aa27.78■■■□□ 2.04
SKA2-202ENST00000437036 EIF4G1Q04637 1599 aaKnown RBP27.14■■□□□ 1.93
SKA2-202ENST00000437036 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
SKA2-202ENST00000437036 BAZ1AQ9NRL2 1556 aaPredicted RBP26.99■■□□□ 1.91
SKA2-202ENST00000437036 DNAJC5BQ9UF47 199 aa26.95■■□□□ 1.9
SKA2-202ENST00000437036 SMARCA4P51532 1647 aa26.92■■□□□ 1.9
SKA2-202ENST00000437036 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
SKA2-202ENST00000437036 MROH2BQ7Z745 1585 aa26.83■■□□□ 1.89
SKA2-202ENST00000437036 SMARCA2P51531 1590 aa26.72■■□□□ 1.87
SKA2-202ENST00000437036 ATAD2BQ9ULI0 1458 aa26.71■■□□□ 1.87
SKA2-202ENST00000437036 RSF1Q96T23 1441 aaPredicted RBP26.7■■□□□ 1.86
SKA2-202ENST00000437036 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
SKA2-202ENST00000437036 PEG3Q9GZU2 1588 aa26.65■■□□□ 1.86
SKA2-202ENST00000437036 BAZ1BQ9UIG0 1483 aaKnown RBP26.54■■□□□ 1.84
SKA2-202ENST00000437036 WIZO95785 1651 aa26.54■■□□□ 1.84
SKA2-202ENST00000437036 HMGXB3Q12766 1538 aa26.53■■□□□ 1.84
SKA2-202ENST00000437036 SUPT5HO00267 1087 aaKnown RBP26.39■■□□□ 1.82
SKA2-202ENST00000437036 TOP2AP11388 1531 aaKnown RBP26.33■■□□□ 1.81
SKA2-202ENST00000437036 CCDC88BA6NC98 1476 aa26.02■■□□□ 1.76
SKA2-202ENST00000437036 CADPSQ9ULU8 1353 aa25.93■■□□□ 1.74
SKA2-202ENST00000437036 LAMC3Q9Y6N6 1575 aa25.88■■□□□ 1.73
SKA2-202ENST00000437036 NESP48681 1621 aa25.85■■□□□ 1.73
SKA2-202ENST00000437036 CFTRP13569 1480 aa25.81■■□□□ 1.72
SKA2-202ENST00000437036 PDS5BQ9NTI5 1447 aa25.75■■□□□ 1.71
SKA2-202ENST00000437036 ERCC6Q03468 1493 aa25.69■■□□□ 1.7
SKA2-202ENST00000437036 FANCD2Q9BXW9 1451 aa25.6■■□□□ 1.69
SKA2-202ENST00000437036 PRDM2Q13029 1718 aa25.57■■□□□ 1.68
SKA2-202ENST00000437036 CEP164Q9UPV0 1460 aa25.54■■□□□ 1.68
SKA2-202ENST00000437036 KIF21AQ7Z4S6 1674 aa25.52■■□□□ 1.68
SKA2-202ENST00000437036 MRC2Q9UBG0 1479 aa25.42■■□□□ 1.66
SKA2-202ENST00000437036 THOC2Q8NI27 1593 aaKnown RBP25.34■■□□□ 1.65
SKA2-202ENST00000437036 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
SKA2-202ENST00000437036 WDR62O43379 1518 aa25.28■■□□□ 1.64
SKA2-202ENST00000437036 URB2Q14146 1524 aaKnown RBP25.28■■□□□ 1.64
SKA2-202ENST00000437036 CUX2O14529 1486 aa25.25■■□□□ 1.63
SKA2-202ENST00000437036 DNMBPQ6XZF7 1577 aa25.22■■□□□ 1.63
SKA2-202ENST00000437036 TOPBP1Q92547 1522 aa25.22■■□□□ 1.63
SKA2-202ENST00000437036 WRNQ14191 1432 aaPredicted RBP eCLIP25.2■■□□□ 1.62
SKA2-202ENST00000437036 CUX1P39880 1505 aa25.15■■□□□ 1.62
SKA2-202ENST00000437036 TOP2BQ02880 1626 aa25.04■■□□□ 1.6
SKA2-202ENST00000437036 FGD5Q6ZNL6 1462 aa25.03■■□□□ 1.6
SKA2-202ENST00000437036 SYNJ1O43426 1573 aa25.03■■□□□ 1.6
SKA2-202ENST00000437036 POLA1P09884 1462 aaPredicted RBP25.02■■□□□ 1.6
SKA2-202ENST00000437036 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
SKA2-202ENST00000437036 IFT140Q96RY7 1462 aa25.01■■□□□ 1.59
SKA2-202ENST00000437036 SOGA1O94964 1423 aa24.98■■□□□ 1.59
SKA2-202ENST00000437036 TRIM41Q8WV44 630 aa24.94■■□□□ 1.58
SKA2-202ENST00000437036 RAD54L2Q9Y4B4 1467 aa24.91■■□□□ 1.58
SKA2-202ENST00000437036 TARBP1Q13395 1621 aaKnown RBP24.86■■□□□ 1.57
SKA2-202ENST00000437036 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
SKA2-202ENST00000437036 ABCA10Q8WWZ4 1543 aa24.81■■□□□ 1.56
SKA2-202ENST00000437036 ZNF608Q9ULD9 1512 aaPredicted RBP24.8■■□□□ 1.56
SKA2-202ENST00000437036 TDRD9Q8NDG6 1382 aaKnown RBP24.78■■□□□ 1.56
SKA2-202ENST00000437036 WDR97A6NE52 1622 aa24.75■■□□□ 1.55
SKA2-202ENST00000437036 AQRO60306 1485 aaKnown RBP eCLIP24.74■■□□□ 1.55
SKA2-202ENST00000437036 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
SKA2-202ENST00000437036 GAPVD1Q14C86 1478 aa24.69■■□□□ 1.54
SKA2-202ENST00000437036 KIF27Q86VH2 1401 aa24.67■■□□□ 1.54
SKA2-202ENST00000437036 GRIN2BQ13224 1484 aa24.64■■□□□ 1.53
SKA2-202ENST00000437036 ABCA5Q8WWZ7 1642 aa24.63■■□□□ 1.53
SKA2-202ENST00000437036 ERICH3Q5RHP9 1530 aa24.53■■□□□ 1.52
SKA2-202ENST00000437036 PBRM1Q86U86 1689 aa24.53■■□□□ 1.52
SKA2-202ENST00000437036 SNAPC4Q5SXM2 1469 aa24.52■■□□□ 1.52
SKA2-202ENST00000437036 MAGI1Q96QZ7 1491 aaPredicted RBP24.52■■□□□ 1.52
SKA2-202ENST00000437036 IGF1RP08069 1367 aa24.48■■□□□ 1.51
SKA2-202ENST00000437036 EEA1Q15075 1411 aa24.47■■□□□ 1.51
SKA2-202ENST00000437036 RUSC2Q8N2Y8 1516 aa24.46■■□□□ 1.51
SKA2-202ENST00000437036 FBLN2P98095 1184 aa24.46■■□□□ 1.51
SKA2-202ENST00000437036 CHMP7Q8WUX9 453 aaPredicted RBP24.46■■□□□ 1.51
SKA2-202ENST00000437036 FHAD1B1AJZ9 1412 aa24.43■■□□□ 1.5
SKA2-202ENST00000437036 SYNJ2O15056 1496 aa24.42■■□□□ 1.5
SKA2-202ENST00000437036 CSRNP3Q8WYN3 585 aa24.39■■□□□ 1.49
SKA2-202ENST00000437036 ADAMTS12P58397 1594 aa24.38■■□□□ 1.49
SKA2-202ENST00000437036 FAM9AQ8IZU1 332 aaPredicted RBP24.38■■□□□ 1.49
SKA2-202ENST00000437036 CARMIL1Q5VZK9 1371 aa24.38■■□□□ 1.49
SKA2-202ENST00000437036 CUL7Q14999 1698 aa24.37■■□□□ 1.49
SKA2-202ENST00000437036 OSCARQ8IYS5 282 aa24.34■■□□□ 1.49
SKA2-202ENST00000437036 GRIN2AQ12879 1464 aa24.3■■□□□ 1.48
SKA2-202ENST00000437036 CHD1O14646 1710 aa24.3■■□□□ 1.48
SKA2-202ENST00000437036 RAPGEF2Q9Y4G8 1499 aa24.26■■□□□ 1.47
SKA2-202ENST00000437036 PRXQ9BXM0 1461 aa24.24■■□□□ 1.47
SKA2-202ENST00000437036 NUP160Q12769 1436 aa24.17■■□□□ 1.46
SKA2-202ENST00000437036 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
SKA2-202ENST00000437036 KIF21BO75037 1637 aa24.1■■□□□ 1.45
SKA2-202ENST00000437036 CLASP1Q7Z460 1538 aa24.07■■□□□ 1.44
SKA2-202ENST00000437036 KIAA0586Q9BVV6 1533 aa24.05■■□□□ 1.44
SKA2-202ENST00000437036 DNAJC5Q9H3Z4 198 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms