RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 KIF27Q86VH2 1401 aa27.58■■■□□ 2
CALD1-208ENST00000435928 KIF13AQ9H1H9 1805 aa27.56■■■□□ 2
CALD1-208ENST00000435928 IGF1RP08069 1367 aa27.51■■□□□ 1.99
CALD1-208ENST00000435928 KIAA0586Q9BVV6 1533 aa27.5■■□□□ 1.99
CALD1-208ENST00000435928 ADCY10Q96PN6 1610 aa27.44■■□□□ 1.98
CALD1-208ENST00000435928 MAPKBP1O60336 1514 aa27.41■■□□□ 1.98
CALD1-208ENST00000435928 NPM1P06748 294 aaKnown RBP eCLIP27.37■■□□□ 1.97
CALD1-208ENST00000435928 AEBP2Q6ZN18 517 aaPredicted RBP27.36■■□□□ 1.97
CALD1-208ENST00000435928 CARMIL1Q5VZK9 1371 aa27.35■■□□□ 1.97
CALD1-208ENST00000435928 ABCC10Q5T3U5 1492 aa27.35■■□□□ 1.97
CALD1-208ENST00000435928 DIP2BQ9P265 1576 aa27.34■■□□□ 1.97
CALD1-208ENST00000435928 IQGAP2Q13576 1575 aa27.29■■□□□ 1.96
CALD1-208ENST00000435928 FAM69CQ0P6D2 419 aa27.28■■□□□ 1.96
CALD1-208ENST00000435928 CARMIL2Q6F5E8 1435 aa27.24■■□□□ 1.95
CALD1-208ENST00000435928 PTPRGP23470 1445 aa27.23■■□□□ 1.95
CALD1-208ENST00000435928 TNIKQ9UKE5 1360 aa27.19■■□□□ 1.94
CALD1-208ENST00000435928 TSPOAP1O95153 1857 aa27.19■■□□□ 1.94
CALD1-208ENST00000435928 TTBK1Q5TCY1 1321 aaPredicted RBP27.16■■□□□ 1.94
CALD1-208ENST00000435928 RAPGEF2Q9Y4G8 1499 aa27.14■■□□□ 1.94
CALD1-208ENST00000435928 ABCC2Q92887 1545 aa27.14■■□□□ 1.94
CALD1-208ENST00000435928 KDM6BO15054 1643 aa27.12■■□□□ 1.93
CALD1-208ENST00000435928 DISP1Q96F81 1524 aa27.11■■□□□ 1.93
CALD1-208ENST00000435928 UGGT2Q9NYU1 1516 aa27.08■■□□□ 1.93
CALD1-208ENST00000435928 UHRF1BP1LA0JNW5 1464 aa27.07■■□□□ 1.92
CALD1-208ENST00000435928 KIAA0556O60303 1618 aa27.05■■□□□ 1.92
CALD1-208ENST00000435928 CTTNBP2Q8WZ74 1663 aa27.05■■□□□ 1.92
CALD1-208ENST00000435928 UACAQ9BZF9 1416 aa27.04■■□□□ 1.92
CALD1-208ENST00000435928 ASXL2Q76L83 1435 aa27.03■■□□□ 1.92
CALD1-208ENST00000435928 PLB1Q6P1J6 1458 aa27.02■■□□□ 1.92
CALD1-208ENST00000435928 GLI2P10070 1586 aa27■■□□□ 1.91
CALD1-208ENST00000435928 PPRC1Q5VV67 1664 aaKnown RBP26.97■■□□□ 1.91
CALD1-208ENST00000435928 ZCCHC11Q5TAX3 1644 aaKnown RBP26.96■■□□□ 1.91
CALD1-208ENST00000435928 KDM5BQ9UGL1 1544 aa26.95■■□□□ 1.91
CALD1-208ENST00000435928 MAP3K4Q9Y6R4 1608 aa26.89■■□□□ 1.9
CALD1-208ENST00000435928 EPRSP07814 1512 aaKnown RBP26.87■■□□□ 1.89
CALD1-208ENST00000435928 GOLGA3Q08378 1498 aa26.86■■□□□ 1.89
CALD1-208ENST00000435928 PRXQ9BXM0 1461 aa26.83■■□□□ 1.89
CALD1-208ENST00000435928 TEX14Q8IWB6 1497 aa26.79■■□□□ 1.88
CALD1-208ENST00000435928 WDR7Q9Y4E6 1490 aa26.79■■□□□ 1.88
CALD1-208ENST00000435928 ABCA8O94911 1581 aa26.76■■□□□ 1.87
CALD1-208ENST00000435928 KDM4FA0A1W2PPD8 638 aa26.74■■□□□ 1.87
CALD1-208ENST00000435928 CFAP43Q8NDM7 1665 aa26.7■■□□□ 1.86
CALD1-208ENST00000435928 COL17A1Q9UMD9 1497 aaPredicted RBP26.68■■□□□ 1.86
CALD1-208ENST00000435928 ADGRL1O94910 1474 aa26.62■■□□□ 1.85
CALD1-208ENST00000435928 MAGI3Q5TCQ9 1506 aa26.6■■□□□ 1.85
CALD1-208ENST00000435928 SAMD9Q5K651 1589 aa26.59■■□□□ 1.85
CALD1-208ENST00000435928 CD109Q6YHK3 1445 aa26.59■■□□□ 1.85
CALD1-208ENST00000435928 FAM9AQ8IZU1 332 aaPredicted RBP26.57■■□□□ 1.84
CALD1-208ENST00000435928 KCNH8Q96L42 1107 aa26.57■■□□□ 1.84
CALD1-208ENST00000435928 CSRNP3Q8WYN3 585 aa26.55■■□□□ 1.84
CALD1-208ENST00000435928 P3H3Q8IVL6 736 aa26.53■■□□□ 1.84
CALD1-208ENST00000435928 RAPGEF6Q8TEU7 1601 aa26.51■■□□□ 1.83
CALD1-208ENST00000435928 EEA1Q15075 1411 aa26.51■■□□□ 1.83
CALD1-208ENST00000435928 ATP10BO94823 1461 aa26.49■■□□□ 1.83
CALD1-208ENST00000435928 ARID3CA6NKF2 412 aa26.49■■□□□ 1.83
CALD1-208ENST00000435928 ABCA9Q8IUA7 1624 aa26.45■■□□□ 1.82
CALD1-208ENST00000435928 ARAP3Q8WWN8 1544 aa26.39■■□□□ 1.82
CALD1-208ENST00000435928 KIF21BO75037 1637 aa26.39■■□□□ 1.81
CALD1-208ENST00000435928 NUP153P49790 1475 aaKnown RBP26.36■■□□□ 1.81
CALD1-208ENST00000435928 FHOD3Q2V2M9 1422 aa26.36■■□□□ 1.81
CALD1-208ENST00000435928 RANGAP1P46060 587 aaPredicted RBP26.34■■□□□ 1.81
CALD1-208ENST00000435928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.33■■□□□ 1.81
CALD1-208ENST00000435928 HNRNPUL2Q1KMD3 747 aaKnown RBP26.33■■□□□ 1.81
CALD1-208ENST00000435928 EFCAB5A4FU69 1503 aa26.31■■□□□ 1.8
CALD1-208ENST00000435928 PHLDB1Q86UU1 1377 aa26.3■■□□□ 1.8
CALD1-208ENST00000435928 HECW2Q9P2P5 1572 aa26.29■■□□□ 1.8
CALD1-208ENST00000435928 NEO1Q92859 1461 aa26.28■■□□□ 1.8
CALD1-208ENST00000435928 FRMPD1Q5SYB0 1578 aa26.22■■□□□ 1.79
CALD1-208ENST00000435928 CFAP74Q9C0B2 1584 aa26.18■■□□□ 1.78
CALD1-208ENST00000435928 RAPGEF3O95398 923 aa26.17■■□□□ 1.78
CALD1-208ENST00000435928 PLEKHD1A6NEE1 506 aa26.16■■□□□ 1.78
CALD1-208ENST00000435928 TTC37Q6PGP7 1564 aa26.15■■□□□ 1.78
CALD1-208ENST00000435928 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.14■■□□□ 1.78
CALD1-208ENST00000435928 ADAMTSL3P82987 1691 aa26.14■■□□□ 1.78
CALD1-208ENST00000435928 RICTORQ6R327 1708 aa26.14■■□□□ 1.77
CALD1-208ENST00000435928 CDK13Q14004 1512 aaKnown RBP26.12■■□□□ 1.77
CALD1-208ENST00000435928 ARHGEF40Q8TER5 1519 aa26.11■■□□□ 1.77
CALD1-208ENST00000435928 FANCAO15360 1455 aa26.11■■□□□ 1.77
CALD1-208ENST00000435928 BCORL1Q5H9F3 1711 aa26.1■■□□□ 1.77
CALD1-208ENST00000435928 DENND4BO75064 1496 aaPredicted RBP26.08■■□□□ 1.77
CALD1-208ENST00000435928 HECW1Q76N89 1606 aa26.07■■□□□ 1.76
CALD1-208ENST00000435928 AKNAQ7Z591 1439 aa26.07■■□□□ 1.76
CALD1-208ENST00000435928 UBTFP17480 764 aaKnown RBP26.06■■□□□ 1.76
CALD1-208ENST00000435928 EHMT2Q96KQ7 1210 aa26.06■■□□□ 1.76
CALD1-208ENST00000435928 FMN1Q68DA7 1419 aa26.05■■□□□ 1.76
CALD1-208ENST00000435928 PTPRMP28827 1452 aa26.04■■□□□ 1.76
CALD1-208ENST00000435928 MADDQ8WXG6 1647 aa26.04■■□□□ 1.76
CALD1-208ENST00000435928 ARHGAP35Q9NRY4 1499 aa26.02■■□□□ 1.76
CALD1-208ENST00000435928 ZMYM4Q5VZL5 1548 aa26.02■■□□□ 1.76
CALD1-208ENST00000435928 ARID4BQ4LE39 1312 aaPredicted RBP26.01■■□□□ 1.75
CALD1-208ENST00000435928 CHIC1Q5VXU3 224 aa25.99■■□□□ 1.75
CALD1-208ENST00000435928 ILDR1Q86SU0 546 aaPredicted RBP25.99■■□□□ 1.75
CALD1-208ENST00000435928 MYO5CQ9NQX4 1742 aa25.99■■□□□ 1.75
CALD1-208ENST00000435928 ZFYVE16Q7Z3T8 1539 aa25.97■■□□□ 1.75
CALD1-208ENST00000435928 RIMS1Q86UR5 1692 aaKnown RBP25.96■■□□□ 1.75
CALD1-208ENST00000435928 ATP1B4Q9UN42 357 aaPredicted RBP25.95■■□□□ 1.74
CALD1-208ENST00000435928 PLCH2O75038 1416 aa25.94■■□□□ 1.74
CALD1-208ENST00000435928 KIF14Q15058 1648 aa25.93■■□□□ 1.74
CALD1-208ENST00000435928 LRRIQ1Q96JM4 1722 aa25.92■■□□□ 1.74
CALD1-208ENST00000435928 MAGI2Q86UL8 1455 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms