RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 NISCHQ9Y2I1 1504 aa39.5■■■■□ 3.91
CALD1-208ENST00000435928 CCDC180Q9P1Z9 1646 aa35.56■■■■□ 3.28
CALD1-208ENST00000435928 ABCC9O60706 1549 aa35.47■■■■□ 3.27
CALD1-208ENST00000435928 RB1CC1Q8TDY2 1594 aa33.81■■■■□ 3
CALD1-208ENST00000435928 NACADO15069 1562 aa33.55■■■□□ 2.96
CALD1-208ENST00000435928 DCAF8L2P0C7V8 631 aa33.27■■■□□ 2.92
CALD1-208ENST00000435928 DNAJC5BQ9UF47 199 aa33.17■■■□□ 2.9
CALD1-208ENST00000435928 UNC13AQ9UPW8 1703 aa33.11■■■□□ 2.89
CALD1-208ENST00000435928 MYO15BQ96JP2 1530 aa33.07■■■□□ 2.88
CALD1-208ENST00000435928 PABPN1Q86U42 306 aaKnown RBP eCLIP32.95■■■□□ 2.87
CALD1-208ENST00000435928 BICRAQ9NZM4 1560 aa32.79■■■□□ 2.84
CALD1-208ENST00000435928 ZCCHC6Q5VYS8 1495 aaKnown RBP32.75■■■□□ 2.83
CALD1-208ENST00000435928 DCAF1Q9Y4B6 1507 aa32.65■■■□□ 2.82
CALD1-208ENST00000435928 SHROOM4Q9ULL8 1493 aa32.39■■■□□ 2.78
CALD1-208ENST00000435928 SCRIBQ14160 1630 aa32.36■■■□□ 2.77
CALD1-208ENST00000435928 CC2D2AQ9P2K1 1620 aa32.08■■■□□ 2.73
CALD1-208ENST00000435928 EIF4G1Q04637 1599 aaKnown RBP32.01■■■□□ 2.71
CALD1-208ENST00000435928 CECR2Q9BXF3 1484 aa31.96■■■□□ 2.71
CALD1-208ENST00000435928 NCAPD3P42695 1498 aa30.92■■■□□ 2.54
CALD1-208ENST00000435928 SMARCA4P51532 1647 aa30.87■■■□□ 2.53
CALD1-208ENST00000435928 ATAD2BQ9ULI0 1458 aa30.83■■■□□ 2.53
CALD1-208ENST00000435928 SMARCA2P51531 1590 aa30.8■■■□□ 2.52
CALD1-208ENST00000435928 HMGXB3Q12766 1538 aa30.77■■■□□ 2.52
CALD1-208ENST00000435928 BAZ1AQ9NRL2 1556 aaPredicted RBP30.7■■■□□ 2.5
CALD1-208ENST00000435928 ERCC6Q03468 1493 aa30.66■■■□□ 2.5
CALD1-208ENST00000435928 CUX2O14529 1486 aa30.61■■■□□ 2.49
CALD1-208ENST00000435928 BAZ1BQ9UIG0 1483 aaKnown RBP30.58■■■□□ 2.49
CALD1-208ENST00000435928 PEG3Q9GZU2 1588 aa30.55■■■□□ 2.48
CALD1-208ENST00000435928 DNAJC5Q9H3Z4 198 aa30.5■■■□□ 2.47
CALD1-208ENST00000435928 NESP48681 1621 aa30.46■■■□□ 2.47
CALD1-208ENST00000435928 MROH2BQ7Z745 1585 aa30.43■■■□□ 2.46
CALD1-208ENST00000435928 LAMC3Q9Y6N6 1575 aa30.3■■■□□ 2.44
CALD1-208ENST00000435928 THOC2Q8NI27 1593 aaKnown RBP30.23■■■□□ 2.43
CALD1-208ENST00000435928 KIF21AQ7Z4S6 1674 aa30.17■■■□□ 2.42
CALD1-208ENST00000435928 WIZO95785 1651 aa30.11■■■□□ 2.41
CALD1-208ENST00000435928 PDS5BQ9NTI5 1447 aa30.07■■■□□ 2.4
CALD1-208ENST00000435928 CADPSQ9ULU8 1353 aa29.97■■■□□ 2.39
CALD1-208ENST00000435928 MRC2Q9UBG0 1479 aa29.85■■■□□ 2.37
CALD1-208ENST00000435928 WDR62O43379 1518 aa29.79■■■□□ 2.36
CALD1-208ENST00000435928 RSF1Q96T23 1441 aaPredicted RBP29.76■■■□□ 2.35
CALD1-208ENST00000435928 CEP164Q9UPV0 1460 aa29.74■■■□□ 2.35
CALD1-208ENST00000435928 TOP2AP11388 1531 aaKnown RBP29.73■■■□□ 2.35
CALD1-208ENST00000435928 FANCD2Q9BXW9 1451 aa29.68■■■□□ 2.34
CALD1-208ENST00000435928 CFTRP13569 1480 aa29.65■■■□□ 2.34
CALD1-208ENST00000435928 PRDM2Q13029 1718 aa29.52■■■□□ 2.32
CALD1-208ENST00000435928 URB2Q14146 1524 aaKnown RBP29.43■■■□□ 2.3
CALD1-208ENST00000435928 CCDC88BA6NC98 1476 aa29.33■■■□□ 2.29
CALD1-208ENST00000435928 TRIM41Q8WV44 630 aa29.2■■■□□ 2.26
CALD1-208ENST00000435928 OSCARQ8IYS5 282 aa29.12■■■□□ 2.25
CALD1-208ENST00000435928 IFT140Q96RY7 1462 aa29.11■■■□□ 2.25
CALD1-208ENST00000435928 TOPBP1Q92547 1522 aa29.11■■■□□ 2.25
CALD1-208ENST00000435928 ABCC8Q09428 1581 aa29.05■■■□□ 2.24
CALD1-208ENST00000435928 ZNF608Q9ULD9 1512 aaPredicted RBP29.05■■■□□ 2.24
CALD1-208ENST00000435928 DNMBPQ6XZF7 1577 aa29.05■■■□□ 2.24
CALD1-208ENST00000435928 EIF4G3O43432 1585 aaKnown RBP28.98■■■□□ 2.23
CALD1-208ENST00000435928 TARBP1Q13395 1621 aaKnown RBP28.89■■■□□ 2.22
CALD1-208ENST00000435928 RIMBP3CA6NJZ7 1639 aa28.86■■■□□ 2.21
CALD1-208ENST00000435928 RIMBP3BA6NNM3 1639 aa28.86■■■□□ 2.21
CALD1-208ENST00000435928 RIMBP3Q9UFD9 1639 aa28.86■■■□□ 2.21
CALD1-208ENST00000435928 POLA1P09884 1462 aaPredicted RBP28.81■■■□□ 2.2
CALD1-208ENST00000435928 CHD1O14646 1710 aa28.79■■■□□ 2.2
CALD1-208ENST00000435928 AQRO60306 1485 aaKnown RBP eCLIP28.77■■■□□ 2.2
CALD1-208ENST00000435928 ARHGEF11O15085 1522 aa28.74■■■□□ 2.19
CALD1-208ENST00000435928 RAD54L2Q9Y4B4 1467 aa28.67■■■□□ 2.18
CALD1-208ENST00000435928 SOGA1O94964 1423 aa28.64■■■□□ 2.18
CALD1-208ENST00000435928 FGD5Q6ZNL6 1462 aa28.64■■■□□ 2.17
CALD1-208ENST00000435928 WDR97A6NE52 1622 aa28.63■■■□□ 2.17
CALD1-208ENST00000435928 CUX1P39880 1505 aa28.61■■■□□ 2.17
CALD1-208ENST00000435928 TDRD9Q8NDG6 1382 aaKnown RBP28.58■■■□□ 2.17
CALD1-208ENST00000435928 FBLN2P98095 1184 aa28.57■■■□□ 2.16
CALD1-208ENST00000435928 SNAPC4Q5SXM2 1469 aa28.53■■■□□ 2.16
CALD1-208ENST00000435928 MAGI1Q96QZ7 1491 aaPredicted RBP28.46■■■□□ 2.15
CALD1-208ENST00000435928 CYB5RLQ6IPT4 315 aa28.44■■■□□ 2.14
CALD1-208ENST00000435928 ARAP1Q96P48 1450 aa28.44■■■□□ 2.14
CALD1-208ENST00000435928 GRIN2BQ13224 1484 aa28.43■■■□□ 2.14
CALD1-208ENST00000435928 PBRM1Q86U86 1689 aa28.42■■■□□ 2.14
CALD1-208ENST00000435928 CLASP1Q7Z460 1538 aa28.4■■■□□ 2.14
CALD1-208ENST00000435928 SYNJ1O43426 1573 aa28.4■■■□□ 2.14
CALD1-208ENST00000435928 SUPT5HO00267 1087 aaKnown RBP28.39■■■□□ 2.14
CALD1-208ENST00000435928 CHMP7Q8WUX9 453 aaPredicted RBP28.36■■■□□ 2.13
CALD1-208ENST00000435928 SYNJ2O15056 1496 aa28.35■■■□□ 2.13
CALD1-208ENST00000435928 GAPVD1Q14C86 1478 aa28.33■■■□□ 2.13
CALD1-208ENST00000435928 ABCA5Q8WWZ7 1642 aa28.32■■■□□ 2.12
CALD1-208ENST00000435928 ABCA10Q8WWZ4 1543 aa28.3■■■□□ 2.12
CALD1-208ENST00000435928 BIVM-ERCC5R4GMW8 1640 aa28.21■■■□□ 2.11
CALD1-208ENST00000435928 TOP2BQ02880 1626 aa28.18■■■□□ 2.1
CALD1-208ENST00000435928 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
CALD1-208ENST00000435928 TRHP20396 242 aaPredicted RBP28.15■■■□□ 2.1
CALD1-208ENST00000435928 ADAMTS12P58397 1594 aa28.11■■■□□ 2.09
CALD1-208ENST00000435928 GRIN2AQ12879 1464 aa28.08■■■□□ 2.09
CALD1-208ENST00000435928 CEP170Q5SW79 1584 aa27.99■■■□□ 2.07
CALD1-208ENST00000435928 ERICH3Q5RHP9 1530 aa27.97■■■□□ 2.07
CALD1-208ENST00000435928 NUP160Q12769 1436 aa27.97■■■□□ 2.07
CALD1-208ENST00000435928 FHAD1B1AJZ9 1412 aa27.96■■■□□ 2.07
CALD1-208ENST00000435928 ERCC6L2Q5T890 1561 aa27.93■■■□□ 2.06
CALD1-208ENST00000435928 SHROOM2Q13796 1616 aa27.9■■■□□ 2.06
CALD1-208ENST00000435928 RUSC2Q8N2Y8 1516 aa27.72■■■□□ 2.03
CALD1-208ENST00000435928 PRG4Q92954 1404 aaPredicted RBP27.68■■■□□ 2.02
CALD1-208ENST00000435928 CUL7Q14999 1698 aa27.62■■■□□ 2.01
CALD1-208ENST00000435928 JPH4Q96JJ6 628 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms