RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 NESP48681 1621 aa15.21■□□□□ 0.02
NOD1-206ENST00000434755 GRIN2BQ13224 1484 aa15.18■□□□□ 0.02
NOD1-206ENST00000434755 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
NOD1-206ENST00000434755 IGF1RP08069 1367 aa15.17■□□□□ 0.02
NOD1-206ENST00000434755 ZNF777Q9ULD5 760 aaPredicted RBP15.16■□□□□ 0.02
NOD1-206ENST00000434755 SYNJ1O43426 1573 aa15.16■□□□□ 0.02
NOD1-206ENST00000434755 ZNF326Q5BKZ1 582 aaKnown RBP15.15■□□□□ 0.02
NOD1-206ENST00000434755 CUX1P39880 1505 aa15.15■□□□□ 0.02
NOD1-206ENST00000434755 NEFLP07196 543 aa15.15■□□□□ 0.02
NOD1-206ENST00000434755 ERICH3Q5RHP9 1530 aa15.14■□□□□ 0.01
NOD1-206ENST00000434755 POLA1P09884 1462 aaPredicted RBP15.13■□□□□ 0.01
NOD1-206ENST00000434755 RAD54L2Q9Y4B4 1467 aa15.12■□□□□ 0.01
NOD1-206ENST00000434755 DIEXFQ68CQ4 756 aaKnown RBP15.12■□□□□ 0.01
NOD1-206ENST00000434755 TSPY4P0CV99 314 aa15.11■□□□□ 0.01
NOD1-206ENST00000434755 TSPY10P0CW01 314 aa15.11■□□□□ 0.01
NOD1-206ENST00000434755 KIF21BO75037 1637 aa15.11■□□□□ 0.01
NOD1-206ENST00000434755 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
NOD1-206ENST00000434755 CLSPNQ9HAW4 1339 aa15.1■□□□□ 0.01
NOD1-206ENST00000434755 ZNF316A6NFI3 1004 aaPredicted RBP15.1■□□□□ 0.01
NOD1-206ENST00000434755 ABCA10Q8WWZ4 1543 aa15.09■□□□□ 0.01
NOD1-206ENST00000434755 JPH4Q96JJ6 628 aa15.05■□□□□ -0
NOD1-206ENST00000434755 RUSC2Q8N2Y8 1516 aa15.05■□□□□ -0
NOD1-206ENST00000434755 BIVM-ERCC5R4GMW8 1640 aa15.04■□□□□ -0
NOD1-206ENST00000434755 PRXQ9BXM0 1461 aa15.01□□□□□ -0.01
NOD1-206ENST00000434755 AQRO60306 1485 aaKnown RBP eCLIP15.01□□□□□ -0.013e-6■■■■□ 21.1
NOD1-206ENST00000434755 CFDP1Q9UEE9 299 aaPredicted RBP15□□□□□ -0.01
NOD1-206ENST00000434755 OSCARQ8IYS5 282 aa14.99□□□□□ -0.01
NOD1-206ENST00000434755 CCNB3Q8WWL7 1395 aa14.99□□□□□ -0.01
NOD1-206ENST00000434755 CUL7Q14999 1698 aa14.97□□□□□ -0.01
NOD1-206ENST00000434755 URB2Q14146 1524 aaKnown RBP14.95□□□□□ -0.02
NOD1-206ENST00000434755 EFCAB5A4FU69 1503 aa14.95□□□□□ -0.02
NOD1-206ENST00000434755 ESF1Q9H501 851 aaKnown RBP14.95□□□□□ -0.02
NOD1-206ENST00000434755 CHIC2Q9UKJ5 165 aa14.94□□□□□ -0.02
NOD1-206ENST00000434755 ARHGAP35Q9NRY4 1499 aa14.94□□□□□ -0.02
NOD1-206ENST00000434755 MAGI1Q96QZ7 1491 aaPredicted RBP14.94□□□□□ -0.02
NOD1-206ENST00000434755 KCNH8Q96L42 1107 aa14.93□□□□□ -0.02
NOD1-206ENST00000434755 PTPRGP23470 1445 aa14.93□□□□□ -0.02
NOD1-206ENST00000434755 PRDM2Q13029 1718 aa14.93□□□□□ -0.02
NOD1-206ENST00000434755 CCDC18Q5T9S5 1454 aa14.93□□□□□ -0.02
NOD1-206ENST00000434755 ERICH6Q7L0X2 663 aa14.93□□□□□ -0.02
NOD1-206ENST00000434755 FHOD3Q2V2M9 1422 aa14.92□□□□□ -0.02
NOD1-206ENST00000434755 PLPPR3Q6T4P5 718 aa14.91□□□□□ -0.02
NOD1-206ENST00000434755 SNAPC4Q5SXM2 1469 aa14.88□□□□□ -0.03
NOD1-206ENST00000434755 RSPH4AQ5TD94 716 aa14.88□□□□□ -0.03
NOD1-206ENST00000434755 SYNJ2O15056 1496 aa14.86□□□□□ -0.03
NOD1-206ENST00000434755 TIMELESSQ9UNS1 1208 aa14.86□□□□□ -0.03
NOD1-206ENST00000434755 KIAA0586Q9BVV6 1533 aa14.86□□□□□ -0.03
NOD1-206ENST00000434755 TONSLQ96HA7 1378 aa14.86□□□□□ -0.03
NOD1-206ENST00000434755 BCANQ96GW7 911 aa14.86□□□□□ -0.03
NOD1-206ENST00000434755 EFCAB2Q5VUJ9 269 aa14.83□□□□□ -0.03
NOD1-206ENST00000434755 WDR97A6NE52 1622 aa14.83□□□□□ -0.04
NOD1-206ENST00000434755 CASKIN1Q8WXD9 1431 aa14.82□□□□□ -0.04
NOD1-206ENST00000434755 CHGAP10645 457 aaKnown RBP14.81□□□□□ -0.04
NOD1-206ENST00000434755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.81□□□□□ -0.04
NOD1-206ENST00000434755 FYCO1Q9BQS8 1478 aa14.79□□□□□ -0.04
NOD1-206ENST00000434755 WDR62O43379 1518 aa14.79□□□□□ -0.04
NOD1-206ENST00000434755 ANP32CO43423 234 aa14.78□□□□□ -0.04
NOD1-206ENST00000434755 GRIN2AQ12879 1464 aa14.77□□□□□ -0.05
NOD1-206ENST00000434755 SETD5Q9C0A6 1442 aa14.76□□□□□ -0.05
NOD1-206ENST00000434755 IQGAP2Q13576 1575 aa14.76□□□□□ -0.05
NOD1-206ENST00000434755 PRG4Q92954 1404 aaPredicted RBP14.74□□□□□ -0.05
NOD1-206ENST00000434755 RRP7BPQ9NSQ0 103 aa14.74□□□□□ -0.05
NOD1-206ENST00000434755 KANK4Q5T7N3 995 aaPredicted RBP14.73□□□□□ -0.05
NOD1-206ENST00000434755 SENP3Q9H4L4 574 aaPredicted RBP14.73□□□□□ -0.05
NOD1-206ENST00000434755 KIF21AQ7Z4S6 1674 aa14.72□□□□□ -0.05
NOD1-206ENST00000434755 ANKRD30AQ9BXX3 1397 aa14.71□□□□□ -0.05
NOD1-206ENST00000434755 KANK1Q14678 1352 aa14.71□□□□□ -0.05
NOD1-206ENST00000434755 STAG3Q9UJ98 1225 aa14.7□□□□□ -0.06
NOD1-206ENST00000434755 HECW1Q76N89 1606 aa14.68□□□□□ -0.06
NOD1-206ENST00000434755 ZNF608Q9ULD9 1512 aaPredicted RBP14.67□□□□□ -0.06
NOD1-206ENST00000434755 HIRIP3Q9BW71 556 aaPredicted RBP14.67□□□□□ -0.06
NOD1-206ENST00000434755 ARAP1Q96P48 1450 aa14.66□□□□□ -0.06
NOD1-206ENST00000434755 KDM2AQ9Y2K7 1162 aa14.66□□□□□ -0.06
NOD1-206ENST00000434755 MAP3K1Q13233 1512 aa14.66□□□□□ -0.06
NOD1-206ENST00000434755 LRRC9Q6ZRR7 1453 aa14.65□□□□□ -0.06
NOD1-206ENST00000434755 DDX10Q13206 875 aaKnown RBP14.63□□□□□ -0.07
NOD1-206ENST00000434755 EHBP1L1Q8N3D4 1523 aa14.63□□□□□ -0.07
NOD1-206ENST00000434755 MYOM3Q5VTT5 1437 aa14.62□□□□□ -0.07
NOD1-206ENST00000434755 MYT1Q01538 1121 aa14.62□□□□□ -0.07
NOD1-206ENST00000434755 RRBP1Q9P2E9 1410 aaKnown RBP14.61□□□□□ -0.07
NOD1-206ENST00000434755 SLC24A1O60721 1099 aa14.61□□□□□ -0.07
NOD1-206ENST00000434755 ADAMTS12P58397 1594 aa14.6□□□□□ -0.07
NOD1-206ENST00000434755 RAB3GAP2Q9H2M9 1393 aa14.6□□□□□ -0.07
NOD1-206ENST00000434755 UACAQ9BZF9 1416 aa14.59□□□□□ -0.07
NOD1-206ENST00000434755 BCL11AQ9H165 835 aa14.59□□□□□ -0.07
NOD1-206ENST00000434755 SPAG9O60271 1321 aaKnown RBP14.58□□□□□ -0.07
NOD1-206ENST00000434755 TROQ12816 1431 aaPredicted RBP14.58□□□□□ -0.08
NOD1-206ENST00000434755 CYB5RLQ6IPT4 315 aa14.58□□□□□ -0.08
NOD1-206ENST00000434755 PLEKHH2Q8IVE3 1493 aa14.58□□□□□ -0.08
NOD1-206ENST00000434755 MIA2Q96PC5 1412 aa14.57□□□□□ -0.08
NOD1-206ENST00000434755 FGD6Q6ZV73 1430 aa14.57□□□□□ -0.08
NOD1-206ENST00000434755 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
NOD1-206ENST00000434755 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.57□□□□□ -0.08
NOD1-206ENST00000434755 ABCA5Q8WWZ7 1642 aa14.56□□□□□ -0.08
NOD1-206ENST00000434755 EIF4G3O43432 1585 aaKnown RBP14.56□□□□□ -0.08
NOD1-206ENST00000434755 GTF3C3Q9Y5Q9 886 aa14.55□□□□□ -0.08
NOD1-206ENST00000434755 TIAM1Q13009 1591 aa14.55□□□□□ -0.08
NOD1-206ENST00000434755 EIF4G2P78344 907 aaKnown RBP eCLIP14.54□□□□□ -0.08
NOD1-206ENST00000434755 THOC2Q8NI27 1593 aaKnown RBP14.54□□□□□ -0.08
NOD1-206ENST00000434755 NCOA2Q15596 1464 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms