RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 NISCHQ9Y2I1 1504 aa21.14■□□□□ 0.97
NOD1-206ENST00000434755 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
NOD1-206ENST00000434755 CCDC180Q9P1Z9 1646 aa18.21■□□□□ 0.51
NOD1-206ENST00000434755 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
NOD1-206ENST00000434755 SHROOM4Q9ULL8 1493 aa18.04■□□□□ 0.48
NOD1-206ENST00000434755 ABCC9O60706 1549 aa17.8■□□□□ 0.44
NOD1-206ENST00000434755 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
NOD1-206ENST00000434755 EHMT2Q96KQ7 1210 aa17.51■□□□□ 0.39
NOD1-206ENST00000434755 DCAF1Q9Y4B6 1507 aa17.36■□□□□ 0.37
NOD1-206ENST00000434755 NACADO15069 1562 aa17.34■□□□□ 0.37
NOD1-206ENST00000434755 RB1CC1Q8TDY2 1594 aa17.32■□□□□ 0.36
NOD1-206ENST00000434755 MYO15BQ96JP2 1530 aa17.15■□□□□ 0.34
NOD1-206ENST00000434755 FAM9AQ8IZU1 332 aaPredicted RBP17.09■□□□□ 0.33
NOD1-206ENST00000434755 SCRIBQ14160 1630 aa17.04■□□□□ 0.32
NOD1-206ENST00000434755 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
NOD1-206ENST00000434755 TRIM41Q8WV44 630 aa16.87■□□□□ 0.29
NOD1-206ENST00000434755 TTBK1Q5TCY1 1321 aaPredicted RBP16.79■□□□□ 0.28
NOD1-206ENST00000434755 RANGAP1P46060 587 aaPredicted RBP16.77■□□□□ 0.28
NOD1-206ENST00000434755 CHIC1Q5VXU3 224 aa16.69■□□□□ 0.26
NOD1-206ENST00000434755 APLP2Q06481 763 aa16.65■□□□□ 0.26
NOD1-206ENST00000434755 BAZ1AQ9NRL2 1556 aaPredicted RBP16.58■□□□□ 0.25
NOD1-206ENST00000434755 PCGF6Q9BYE7 350 aa16.5■□□□□ 0.23
NOD1-206ENST00000434755 RSF1Q96T23 1441 aaPredicted RBP16.48■□□□□ 0.23
NOD1-206ENST00000434755 ATP1B4Q9UN42 357 aaPredicted RBP16.45■□□□□ 0.22
NOD1-206ENST00000434755 UBTFP17480 764 aaKnown RBP16.44■□□□□ 0.22
NOD1-206ENST00000434755 BAZ1BQ9UIG0 1483 aaKnown RBP16.37■□□□□ 0.21
NOD1-206ENST00000434755 SMARCA2P51531 1590 aa16.33■□□□□ 0.21
NOD1-206ENST00000434755 PPARGC1BQ86YN6 1023 aaKnown RBP16.33■□□□□ 0.2
NOD1-206ENST00000434755 ZEB1P37275 1124 aaPredicted RBP16.31■□□□□ 0.2
NOD1-206ENST00000434755 CECR2Q9BXF3 1484 aa16.28■□□□□ 0.2
NOD1-206ENST00000434755 LOC105371045A0A1W2PR82 267 aa16.2■□□□□ 0.18
NOD1-206ENST00000434755 TRIM26Q12899 539 aaPredicted RBP16.19■□□□□ 0.18
NOD1-206ENST00000434755 MROH2BQ7Z745 1585 aa16.18■□□□□ 0.18
NOD1-206ENST00000434755 SMARCA4P51532 1647 aa16.13■□□□□ 0.17
NOD1-206ENST00000434755 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
NOD1-206ENST00000434755 CCER1Q8TC90 406 aaPredicted RBP16.07■□□□□ 0.16
NOD1-206ENST00000434755 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
NOD1-206ENST00000434755 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
NOD1-206ENST00000434755 EEA1Q15075 1411 aa16.03■□□□□ 0.16
NOD1-206ENST00000434755 WRNQ14191 1432 aaPredicted RBP eCLIP15.97■□□□□ 0.15
NOD1-206ENST00000434755 CCDC88BA6NC98 1476 aa15.94■□□□□ 0.14
NOD1-206ENST00000434755 NCAPD3P42695 1498 aa15.94■□□□□ 0.14
NOD1-206ENST00000434755 WIZO95785 1651 aa15.94■□□□□ 0.14
NOD1-206ENST00000434755 ITGAEP38570 1179 aa15.93■□□□□ 0.14
NOD1-206ENST00000434755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.93■□□□□ 0.14
NOD1-206ENST00000434755 HRCP23327 699 aa15.93■□□□□ 0.14
NOD1-206ENST00000434755 HNRNPUL2Q1KMD3 747 aaKnown RBP15.93■□□□□ 0.14
NOD1-206ENST00000434755 EIF4G1Q04637 1599 aaKnown RBP15.93■□□□□ 0.14
NOD1-206ENST00000434755 PDS5BQ9NTI5 1447 aa15.92■□□□□ 0.14
NOD1-206ENST00000434755 BICRAQ9NZM4 1560 aa15.87■□□□□ 0.13
NOD1-206ENST00000434755 CADPSQ9ULU8 1353 aa15.85■□□□□ 0.13
NOD1-206ENST00000434755 ERCC6Q03468 1493 aa15.83■□□□□ 0.12
NOD1-206ENST00000434755 KIF27Q86VH2 1401 aa15.81■□□□□ 0.12
NOD1-206ENST00000434755 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
NOD1-206ENST00000434755 FBLN2P98095 1184 aa15.75■□□□□ 0.11
NOD1-206ENST00000434755 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
NOD1-206ENST00000434755 MYT1LQ9UL68 1186 aa15.73■□□□□ 0.11
NOD1-206ENST00000434755 UNC13AQ9UPW8 1703 aa15.71■□□□□ 0.11
NOD1-206ENST00000434755 GOLGA3Q08378 1498 aa15.68■□□□□ 0.1
NOD1-206ENST00000434755 CEP164Q9UPV0 1460 aa15.67■□□□□ 0.1
NOD1-206ENST00000434755 PEG3Q9GZU2 1588 aa15.66■□□□□ 0.1
NOD1-206ENST00000434755 CC2D2AQ9P2K1 1620 aa15.65■□□□□ 0.1
NOD1-206ENST00000434755 CDK11AQ9UQ88 783 aaPredicted RBP15.64■□□□□ 0.09
NOD1-206ENST00000434755 CHMP7Q8WUX9 453 aaPredicted RBP15.63■□□□□ 0.09
NOD1-206ENST00000434755 TNIKQ9UKE5 1360 aa15.6■□□□□ 0.09
NOD1-206ENST00000434755 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
NOD1-206ENST00000434755 CUX2O14529 1486 aa15.57■□□□□ 0.08
NOD1-206ENST00000434755 YTHDC1Q96MU7 727 aaKnown RBP15.56■□□□□ 0.08
NOD1-206ENST00000434755 SOGA1O94964 1423 aa15.55■□□□□ 0.08
NOD1-206ENST00000434755 CFTRP13569 1480 aa15.55■□□□□ 0.08
NOD1-206ENST00000434755 CLIP1P30622 1438 aa15.52■□□□□ 0.08
NOD1-206ENST00000434755 P3H3Q8IVL6 736 aa15.51■□□□□ 0.07
NOD1-206ENST00000434755 CARMIL1Q5VZK9 1371 aa15.5■□□□□ 0.07
NOD1-206ENST00000434755 POLR3GLQ9BT43 218 aa15.5■□□□□ 0.07
NOD1-206ENST00000434755 CNGB1Q14028 1251 aaPredicted RBP15.5■□□□□ 0.07
NOD1-206ENST00000434755 CENPBP07199 599 aaPredicted RBP15.49■□□□□ 0.07
NOD1-206ENST00000434755 ARID3CA6NKF2 412 aa15.48■□□□□ 0.07
NOD1-206ENST00000434755 FAM50AQ14320 339 aaKnown RBP15.48■□□□□ 0.07
NOD1-206ENST00000434755 PELP1Q8IZL8 1130 aaKnown RBP15.48■□□□□ 0.07
NOD1-206ENST00000434755 CEP162Q5TB80 1403 aa15.48■□□□□ 0.07
NOD1-206ENST00000434755 NPM1P06748 294 aaKnown RBP eCLIP15.44■□□□□ 0.06
NOD1-206ENST00000434755 LAMC3Q9Y6N6 1575 aa15.42■□□□□ 0.06
NOD1-206ENST00000434755 FHAD1B1AJZ9 1412 aa15.38■□□□□ 0.05
NOD1-206ENST00000434755 RAPGEF2Q9Y4G8 1499 aa15.34■□□□□ 0.05
NOD1-206ENST00000434755 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.05
NOD1-206ENST00000434755 FGD5Q6ZNL6 1462 aa15.33■□□□□ 0.04
NOD1-206ENST00000434755 TDRD9Q8NDG6 1382 aaKnown RBP15.32■□□□□ 0.04
NOD1-206ENST00000434755 ACIN1Q9UKV3 1341 aaKnown RBP15.32■□□□□ 0.04
NOD1-206ENST00000434755 TRIM52Q96A61 297 aa15.31■□□□□ 0.04
NOD1-206ENST00000434755 MTUS2Q5JR59 1369 aa15.3■□□□□ 0.04
NOD1-206ENST00000434755 CARMIL2Q6F5E8 1435 aa15.3■□□□□ 0.04
NOD1-206ENST00000434755 NEUROD1Q13562 356 aa15.27■□□□□ 0.03
NOD1-206ENST00000434755 DNMBPQ6XZF7 1577 aa15.26■□□□□ 0.03
NOD1-206ENST00000434755 TOP2BQ02880 1626 aa15.26■□□□□ 0.03
NOD1-206ENST00000434755 GAPVD1Q14C86 1478 aa15.25■□□□□ 0.03
NOD1-206ENST00000434755 IFT140Q96RY7 1462 aa15.24■□□□□ 0.03
NOD1-206ENST00000434755 PLEKHD1A6NEE1 506 aa15.23■□□□□ 0.03
NOD1-206ENST00000434755 FMN1Q68DA7 1419 aa15.22■□□□□ 0.03
NOD1-206ENST00000434755 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
NOD1-206ENST00000434755 VPS8Q8N3P4 1428 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms