RNA–Protein interactions for RNA: ENST00000433680.1

TNFAIP3-204, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-204ENST00000433680 SHROOM2Q13796 1616 aa24.35■■□□□ 1.49
TNFAIP3-204ENST00000433680 ARHGEF11O15085 1522 aa24.35■■□□□ 1.49
TNFAIP3-204ENST00000433680 RIMBP3CA6NJZ7 1639 aa24.33■■□□□ 1.49
TNFAIP3-204ENST00000433680 RIMBP3BA6NNM3 1639 aa24.33■■□□□ 1.49
TNFAIP3-204ENST00000433680 RIMBP3Q9UFD9 1639 aa24.33■■□□□ 1.49
TNFAIP3-204ENST00000433680 KIF21BO75037 1637 aa24.32■■□□□ 1.48
TNFAIP3-204ENST00000433680 CTTNBP2Q8WZ74 1663 aa24.29■■□□□ 1.48
TNFAIP3-204ENST00000433680 JPH4Q96JJ6 628 aa24.28■■□□□ 1.48
TNFAIP3-204ENST00000433680 IQGAP2Q13576 1575 aa24.28■■□□□ 1.48
TNFAIP3-204ENST00000433680 PRG4Q92954 1404 aaPredicted RBP24.21■■□□□ 1.47
TNFAIP3-204ENST00000433680 GOLGA3Q08378 1498 aa24.19■■□□□ 1.46
TNFAIP3-204ENST00000433680 ERCC6L2Q5T890 1561 aa24.16■■□□□ 1.46
TNFAIP3-204ENST00000433680 UGGT2Q9NYU1 1516 aa24.16■■□□□ 1.46
TNFAIP3-204ENST00000433680 ARAP1Q96P48 1450 aa24.14■■□□□ 1.46
TNFAIP3-204ENST00000433680 CARMIL2Q6F5E8 1435 aa24.14■■□□□ 1.45
TNFAIP3-204ENST00000433680 CYB5RLQ6IPT4 315 aa24.08■■□□□ 1.45
TNFAIP3-204ENST00000433680 DISP1Q96F81 1524 aa24.07■■□□□ 1.44
TNFAIP3-204ENST00000433680 UBTFP17480 764 aaKnown RBP24.07■■□□□ 1.44
TNFAIP3-204ENST00000433680 KIAA0556O60303 1618 aa24.04■■□□□ 1.44
TNFAIP3-204ENST00000433680 TNIKQ9UKE5 1360 aa24.02■■□□□ 1.44
TNFAIP3-204ENST00000433680 EHMT2Q96KQ7 1210 aa24.01■■□□□ 1.43
TNFAIP3-204ENST00000433680 PTPRGP23470 1445 aa23.97■■□□□ 1.43
TNFAIP3-204ENST00000433680 SAMD9Q5K651 1589 aa23.97■■□□□ 1.43
TNFAIP3-204ENST00000433680 EFCAB5A4FU69 1503 aa23.94■■□□□ 1.42
TNFAIP3-204ENST00000433680 RANGAP1P46060 587 aaPredicted RBP23.86■■□□□ 1.41
TNFAIP3-204ENST00000433680 TTBK1Q5TCY1 1321 aaPredicted RBP23.84■■□□□ 1.41
TNFAIP3-204ENST00000433680 P3H3Q8IVL6 736 aa23.83■■□□□ 1.41
TNFAIP3-204ENST00000433680 ADCY10Q96PN6 1610 aa23.82■■□□□ 1.4
TNFAIP3-204ENST00000433680 UACAQ9BZF9 1416 aa23.82■■□□□ 1.4
TNFAIP3-204ENST00000433680 UHRF1BP1LA0JNW5 1464 aa23.81■■□□□ 1.4
TNFAIP3-204ENST00000433680 ARHGAP35Q9NRY4 1499 aa23.79■■□□□ 1.4
TNFAIP3-204ENST00000433680 ABCC2Q92887 1545 aa23.79■■□□□ 1.4
TNFAIP3-204ENST00000433680 FHOD3Q2V2M9 1422 aa23.77■■□□□ 1.4
TNFAIP3-204ENST00000433680 NPM1P06748 294 aaKnown RBP eCLIP23.77■■□□□ 1.4
TNFAIP3-204ENST00000433680 LOC105371045A0A1W2PR82 267 aa23.76■■□□□ 1.39
TNFAIP3-204ENST00000433680 ABCA8O94911 1581 aa23.76■■□□□ 1.39
TNFAIP3-204ENST00000433680 CLIP1P30622 1438 aa23.74■■□□□ 1.39
TNFAIP3-204ENST00000433680 PLB1Q6P1J6 1458 aa23.74■■□□□ 1.39
TNFAIP3-204ENST00000433680 FMN1Q68DA7 1419 aa23.7■■□□□ 1.38
TNFAIP3-204ENST00000433680 RAPGEF6Q8TEU7 1601 aa23.7■■□□□ 1.38
TNFAIP3-204ENST00000433680 KDM5BQ9UGL1 1544 aa23.69■■□□□ 1.38
TNFAIP3-204ENST00000433680 CEP162Q5TB80 1403 aa23.67■■□□□ 1.38
TNFAIP3-204ENST00000433680 MAPKBP1O60336 1514 aa23.66■■□□□ 1.38
TNFAIP3-204ENST00000433680 ZCCHC11Q5TAX3 1644 aaKnown RBP23.63■■□□□ 1.37
TNFAIP3-204ENST00000433680 NUP153P49790 1475 aaKnown RBP23.57■■□□□ 1.36
TNFAIP3-204ENST00000433680 HECW1Q76N89 1606 aa23.56■■□□□ 1.36
TNFAIP3-204ENST00000433680 ATP10BO94823 1461 aa23.55■■□□□ 1.36
TNFAIP3-204ENST00000433680 ASXL2Q76L83 1435 aa23.54■■□□□ 1.36
TNFAIP3-204ENST00000433680 CASKIN1Q8WXD9 1431 aa23.52■■□□□ 1.36
TNFAIP3-204ENST00000433680 TRHP20396 242 aaPredicted RBP23.52■■□□□ 1.36
TNFAIP3-204ENST00000433680 ABCC10Q5T3U5 1492 aa23.49■■□□□ 1.35
TNFAIP3-204ENST00000433680 FYCO1Q9BQS8 1478 aa23.49■■□□□ 1.35
TNFAIP3-204ENST00000433680 PCF11O94913 1555 aaKnown RBP23.49■■□□□ 1.35
TNFAIP3-204ENST00000433680 WDR7Q9Y4E6 1490 aa23.48■■□□□ 1.35
TNFAIP3-204ENST00000433680 ATP1B4Q9UN42 357 aaPredicted RBP23.47■■□□□ 1.35
TNFAIP3-204ENST00000433680 DIP2BQ9P265 1576 aa23.47■■□□□ 1.35
TNFAIP3-204ENST00000433680 KIF13AQ9H1H9 1805 aa23.47■■□□□ 1.35
TNFAIP3-204ENST00000433680 ARID3CA6NKF2 412 aa23.46■■□□□ 1.35
TNFAIP3-204ENST00000433680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.46■■□□□ 1.35
TNFAIP3-204ENST00000433680 EPRSP07814 1512 aaKnown RBP23.46■■□□□ 1.35
TNFAIP3-204ENST00000433680 HNRNPUL2Q1KMD3 747 aaKnown RBP23.46■■□□□ 1.35
TNFAIP3-204ENST00000433680 CCDC18Q5T9S5 1454 aa23.43■■□□□ 1.34
TNFAIP3-204ENST00000433680 GLI2P10070 1586 aa23.42■■□□□ 1.34
TNFAIP3-204ENST00000433680 LRRIQ1Q96JM4 1722 aa23.42■■□□□ 1.34
TNFAIP3-204ENST00000433680 FAM69CQ0P6D2 419 aa23.41■■□□□ 1.34
TNFAIP3-204ENST00000433680 CDK13Q14004 1512 aaKnown RBP23.41■■□□□ 1.34
TNFAIP3-204ENST00000433680 PLEKHD1A6NEE1 506 aa23.4■■□□□ 1.34
TNFAIP3-204ENST00000433680 VPS8Q8N3P4 1428 aa23.4■■□□□ 1.34
TNFAIP3-204ENST00000433680 CDK11AQ9UQ88 783 aaPredicted RBP23.39■■□□□ 1.33
TNFAIP3-204ENST00000433680 KCNH8Q96L42 1107 aa23.33■■□□□ 1.33
TNFAIP3-204ENST00000433680 MAP3K4Q9Y6R4 1608 aa23.31■■□□□ 1.32
TNFAIP3-204ENST00000433680 CFAP43Q8NDM7 1665 aa23.31■■□□□ 1.32
TNFAIP3-204ENST00000433680 ABCA9Q8IUA7 1624 aa23.28■■□□□ 1.32
TNFAIP3-204ENST00000433680 TROQ12816 1431 aaPredicted RBP23.27■■□□□ 1.32
TNFAIP3-204ENST00000433680 TSPOAP1O95153 1857 aa23.24■■□□□ 1.31
TNFAIP3-204ENST00000433680 CD109Q6YHK3 1445 aa23.23■■□□□ 1.31
TNFAIP3-204ENST00000433680 KIF14Q15058 1648 aa23.22■■□□□ 1.31
TNFAIP3-204ENST00000433680 MAP3K1Q13233 1512 aa23.22■■□□□ 1.31
TNFAIP3-204ENST00000433680 TIAM1Q13009 1591 aa23.21■■□□□ 1.31
TNFAIP3-204ENST00000433680 PPRC1Q5VV67 1664 aaKnown RBP23.2■■□□□ 1.3
TNFAIP3-204ENST00000433680 MAGI3Q5TCQ9 1506 aa23.2■■□□□ 1.3
TNFAIP3-204ENST00000433680 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.2■■□□□ 1.3
TNFAIP3-204ENST00000433680 TEX14Q8IWB6 1497 aa23.2■■□□□ 1.3
TNFAIP3-204ENST00000433680 MTUS2Q5JR59 1369 aa23.17■■□□□ 1.3
TNFAIP3-204ENST00000433680 TTC37Q6PGP7 1564 aa23.16■■□□□ 1.3
TNFAIP3-204ENST00000433680 EHBP1L1Q8N3D4 1523 aa23.16■■□□□ 1.3
TNFAIP3-204ENST00000433680 APLP2Q06481 763 aa23.15■■□□□ 1.3
TNFAIP3-204ENST00000433680 MYO5CQ9NQX4 1742 aa23.12■■□□□ 1.29
TNFAIP3-204ENST00000433680 LRRC9Q6ZRR7 1453 aa23.1■■□□□ 1.29
TNFAIP3-204ENST00000433680 ARAP3Q8WWN8 1544 aa23.09■■□□□ 1.29
TNFAIP3-204ENST00000433680 PHLDB1Q86UU1 1377 aa23.09■■□□□ 1.29
TNFAIP3-204ENST00000433680 CFAP74Q9C0B2 1584 aa23.09■■□□□ 1.29
TNFAIP3-204ENST00000433680 PLCH2O75038 1416 aa23.08■■□□□ 1.29
TNFAIP3-204ENST00000433680 NEO1Q92859 1461 aa23.07■■□□□ 1.28
TNFAIP3-204ENST00000433680 SUPT6HQ7KZ85 1726 aaKnown RBP23.07■■□□□ 1.28
TNFAIP3-204ENST00000433680 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
TNFAIP3-204ENST00000433680 FANCAO15360 1455 aa23.04■■□□□ 1.28
TNFAIP3-204ENST00000433680 KDM6BO15054 1643 aa23.04■■□□□ 1.28
TNFAIP3-204ENST00000433680 PREX2Q70Z35 1606 aa23.04■■□□□ 1.28
TNFAIP3-204ENST00000433680 CDC42BPAQ5VT25 1732 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms