RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 CUL7Q14999 1698 aa38.04■■■■□ 3.68
RPUSD3-206ENST00000433535 JPH4Q96JJ6 628 aa38.02■■■■□ 3.68
RPUSD3-206ENST00000433535 KIAA0586Q9BVV6 1533 aa37.89■■■■□ 3.66
RPUSD3-206ENST00000433535 CARMIL1Q5VZK9 1371 aa37.8■■■■□ 3.64
RPUSD3-206ENST00000433535 KIF13AQ9H1H9 1805 aa37.7■■■■□ 3.63
RPUSD3-206ENST00000433535 ADCY10Q96PN6 1610 aa37.69■■■■□ 3.62
RPUSD3-206ENST00000433535 IQGAP2Q13576 1575 aa37.61■■■■□ 3.61
RPUSD3-206ENST00000433535 MAPKBP1O60336 1514 aa37.56■■■■□ 3.6
RPUSD3-206ENST00000433535 NPM1P06748 294 aaKnown RBP eCLIP37.54■■■■□ 3.6
RPUSD3-206ENST00000433535 RAPGEF2Q9Y4G8 1499 aa37.51■■■■□ 3.59
RPUSD3-206ENST00000433535 ABCC10Q5T3U5 1492 aa37.5■■■■□ 3.59
RPUSD3-206ENST00000433535 PTPRGP23470 1445 aa37.49■■■■□ 3.59
RPUSD3-206ENST00000433535 CARMIL2Q6F5E8 1435 aa37.49■■■■□ 3.59
RPUSD3-206ENST00000433535 TTBK1Q5TCY1 1321 aaPredicted RBP37.48■■■■□ 3.59
RPUSD3-206ENST00000433535 DIP2BQ9P265 1576 aa37.47■■■■□ 3.59
RPUSD3-206ENST00000433535 TNIKQ9UKE5 1360 aa37.44■■■■□ 3.58
RPUSD3-206ENST00000433535 FAM69CQ0P6D2 419 aa37.43■■■■□ 3.58
RPUSD3-206ENST00000433535 DISP1Q96F81 1524 aa37.4■■■■□ 3.58
RPUSD3-206ENST00000433535 UGGT2Q9NYU1 1516 aa37.35■■■■□ 3.57
RPUSD3-206ENST00000433535 ABCC2Q92887 1545 aa37.31■■■■□ 3.56
RPUSD3-206ENST00000433535 KIAA0556O60303 1618 aa37.28■■■■□ 3.56
RPUSD3-206ENST00000433535 CTTNBP2Q8WZ74 1663 aa37.28■■■■□ 3.56
RPUSD3-206ENST00000433535 UHRF1BP1LA0JNW5 1464 aa37.24■■■■□ 3.55
RPUSD3-206ENST00000433535 UACAQ9BZF9 1416 aa37.23■■■■□ 3.55
RPUSD3-206ENST00000433535 TSPOAP1O95153 1857 aa37.22■■■■□ 3.55
RPUSD3-206ENST00000433535 PRXQ9BXM0 1461 aa37.18■■■■□ 3.54
RPUSD3-206ENST00000433535 ASXL2Q76L83 1435 aa37.17■■■■□ 3.54
RPUSD3-206ENST00000433535 AEBP2Q6ZN18 517 aaPredicted RBP37.14■■■■□ 3.54
RPUSD3-206ENST00000433535 PLB1Q6P1J6 1458 aa37.11■■■■□ 3.53
RPUSD3-206ENST00000433535 KDM6BO15054 1643 aa37.1■■■■□ 3.53
RPUSD3-206ENST00000433535 KDM5BQ9UGL1 1544 aa37.09■■■■□ 3.53
RPUSD3-206ENST00000433535 ZCCHC11Q5TAX3 1644 aaKnown RBP37.07■■■■□ 3.53
RPUSD3-206ENST00000433535 GLI2P10070 1586 aa37.04■■■■□ 3.52
RPUSD3-206ENST00000433535 GOLGA3Q08378 1498 aa37.02■■■■□ 3.52
RPUSD3-206ENST00000433535 PPRC1Q5VV67 1664 aaKnown RBP36.99■■■■□ 3.51
RPUSD3-206ENST00000433535 EPRSP07814 1512 aaKnown RBP36.95■■■■□ 3.5
RPUSD3-206ENST00000433535 ABCA8O94911 1581 aa36.91■■■■□ 3.5
RPUSD3-206ENST00000433535 MAP3K4Q9Y6R4 1608 aa36.88■■■■□ 3.5
RPUSD3-206ENST00000433535 CSRNP3Q8WYN3 585 aa36.86■■■■□ 3.49
RPUSD3-206ENST00000433535 WDR7Q9Y4E6 1490 aa36.84■■■■□ 3.49
RPUSD3-206ENST00000433535 EEA1Q15075 1411 aa36.76■■■■□ 3.47
RPUSD3-206ENST00000433535 P3H3Q8IVL6 736 aa36.74■■■■□ 3.47
RPUSD3-206ENST00000433535 SAMD9Q5K651 1589 aa36.74■■■■□ 3.47
RPUSD3-206ENST00000433535 TEX14Q8IWB6 1497 aa36.71■■■■□ 3.47
RPUSD3-206ENST00000433535 COL17A1Q9UMD9 1497 aaPredicted RBP36.69■■■■□ 3.46
RPUSD3-206ENST00000433535 FAM9AQ8IZU1 332 aaPredicted RBP36.65■■■■□ 3.46
RPUSD3-206ENST00000433535 ARID3CA6NKF2 412 aa36.63■■■■□ 3.45
RPUSD3-206ENST00000433535 CFAP43Q8NDM7 1665 aa36.62■■■■□ 3.45
RPUSD3-206ENST00000433535 KCNH8Q96L42 1107 aa36.6■■■■□ 3.45
RPUSD3-206ENST00000433535 KDM4FA0A1W2PPD8 638 aa36.58■■■■□ 3.45
RPUSD3-206ENST00000433535 ATP10BO94823 1461 aa36.56■■■■□ 3.44
RPUSD3-206ENST00000433535 CD109Q6YHK3 1445 aa36.56■■■■□ 3.44
RPUSD3-206ENST00000433535 RAPGEF6Q8TEU7 1601 aa36.56■■■■□ 3.44
RPUSD3-206ENST00000433535 RANGAP1P46060 587 aaPredicted RBP36.55■■■■□ 3.44
RPUSD3-206ENST00000433535 KIF21BO75037 1637 aa36.55■■■■□ 3.44
RPUSD3-206ENST00000433535 MAGI3Q5TCQ9 1506 aa36.54■■■■□ 3.44
RPUSD3-206ENST00000433535 FHOD3Q2V2M9 1422 aa36.5■■■■□ 3.43
RPUSD3-206ENST00000433535 NUP153P49790 1475 aaKnown RBP36.42■■■■□ 3.42
RPUSD3-206ENST00000433535 ADGRL1O94910 1474 aa36.4■■■■□ 3.42
RPUSD3-206ENST00000433535 ABCA9Q8IUA7 1624 aa36.38■■■■□ 3.41
RPUSD3-206ENST00000433535 EFCAB5A4FU69 1503 aa36.37■■■■□ 3.41
RPUSD3-206ENST00000433535 CHIC1Q5VXU3 224 aa36.35■■■■□ 3.41
RPUSD3-206ENST00000433535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.33■■■■□ 3.41
RPUSD3-206ENST00000433535 HNRNPUL2Q1KMD3 747 aaKnown RBP36.33■■■■□ 3.41
RPUSD3-206ENST00000433535 EHMT2Q96KQ7 1210 aa36.31■■■■□ 3.4
RPUSD3-206ENST00000433535 ARAP3Q8WWN8 1544 aa36.24■■■■□ 3.39
RPUSD3-206ENST00000433535 UBTFP17480 764 aaKnown RBP36.18■■■■□ 3.38
RPUSD3-206ENST00000433535 NEO1Q92859 1461 aa36.12■■■■□ 3.37
RPUSD3-206ENST00000433535 CDK13Q14004 1512 aaKnown RBP36.12■■■■□ 3.37
RPUSD3-206ENST00000433535 PHLDB1Q86UU1 1377 aa36.11■■■■□ 3.37
RPUSD3-206ENST00000433535 PLEKHD1A6NEE1 506 aa36.09■■■■□ 3.37
RPUSD3-206ENST00000433535 ARHGAP35Q9NRY4 1499 aa36.09■■■■□ 3.37
RPUSD3-206ENST00000433535 FRMPD1Q5SYB0 1578 aa36.06■■■■□ 3.36
RPUSD3-206ENST00000433535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.05■■■■□ 3.36
RPUSD3-206ENST00000433535 TTC37Q6PGP7 1564 aa36.05■■■■□ 3.36
RPUSD3-206ENST00000433535 RAPGEF3O95398 923 aa36.03■■■■□ 3.36
RPUSD3-206ENST00000433535 HECW1Q76N89 1606 aa36.01■■■■□ 3.36
RPUSD3-206ENST00000433535 FMN1Q68DA7 1419 aa36■■■■□ 3.35
RPUSD3-206ENST00000433535 CFAP74Q9C0B2 1584 aa35.95■■■■□ 3.35
RPUSD3-206ENST00000433535 FANCAO15360 1455 aa35.95■■■■□ 3.35
RPUSD3-206ENST00000433535 ATP1B4Q9UN42 357 aaPredicted RBP35.93■■■■□ 3.34
RPUSD3-206ENST00000433535 AKNAQ7Z591 1439 aa35.91■■■■□ 3.34
RPUSD3-206ENST00000433535 RICTORQ6R327 1708 aa35.9■■■■□ 3.34
RPUSD3-206ENST00000433535 DENND4BO75064 1496 aaPredicted RBP35.87■■■■□ 3.33
RPUSD3-206ENST00000433535 HECW2Q9P2P5 1572 aa35.87■■■■□ 3.33
RPUSD3-206ENST00000433535 ARHGEF40Q8TER5 1519 aa35.84■■■■□ 3.33
RPUSD3-206ENST00000433535 LRRIQ1Q96JM4 1722 aa35.84■■■■□ 3.33
RPUSD3-206ENST00000433535 ADAMTSL3P82987 1691 aa35.81■■■■□ 3.32
RPUSD3-206ENST00000433535 KIF14Q15058 1648 aa35.8■■■■□ 3.32
RPUSD3-206ENST00000433535 MYO5CQ9NQX4 1742 aa35.77■■■■□ 3.32
RPUSD3-206ENST00000433535 PLCH2O75038 1416 aa35.76■■■■□ 3.32
RPUSD3-206ENST00000433535 BCORL1Q5H9F3 1711 aa35.76■■■■□ 3.31
RPUSD3-206ENST00000433535 ZMYM4Q5VZL5 1548 aa35.76■■■■□ 3.31
RPUSD3-206ENST00000433535 PCF11O94913 1555 aaKnown RBP35.76■■■■□ 3.31
RPUSD3-206ENST00000433535 CDK11AQ9UQ88 783 aaPredicted RBP35.72■■■■□ 3.31
RPUSD3-206ENST00000433535 TROQ12816 1431 aaPredicted RBP35.72■■■■□ 3.31
RPUSD3-206ENST00000433535 ARID4BQ4LE39 1312 aaPredicted RBP35.71■■■■□ 3.31
RPUSD3-206ENST00000433535 MADDQ8WXG6 1647 aa35.69■■■■□ 3.3
RPUSD3-206ENST00000433535 ZFYVE16Q7Z3T8 1539 aa35.68■■■■□ 3.3
RPUSD3-206ENST00000433535 PTPRMP28827 1452 aa35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms