RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 TARBP1Q13395 1621 aaKnown RBP21.99■■□□□ 1.11
RFTN1-203ENST00000432519 PCF11O94913 1555 aaKnown RBP21.99■■□□□ 1.11
RFTN1-203ENST00000432519 ATP1B4Q9UN42 357 aaPredicted RBP21.98■■□□□ 1.11
RFTN1-203ENST00000432519 CTTNBP2Q8WZ74 1663 aa21.96■■□□□ 1.11
RFTN1-203ENST00000432519 ITGAEP38570 1179 aa21.95■■□□□ 1.1
RFTN1-203ENST00000432519 CCNB3Q8WWL7 1395 aa21.95■■□□□ 1.1
RFTN1-203ENST00000432519 LRRC9Q6ZRR7 1453 aa21.93■■□□□ 1.1
RFTN1-203ENST00000432519 FHAD1B1AJZ9 1412 aa21.92■■□□□ 1.1
RFTN1-203ENST00000432519 AQRO60306 1485 aaKnown RBP eCLIP21.91■■□□□ 1.1
RFTN1-203ENST00000432519 MAP3K1Q13233 1512 aa21.91■■□□□ 1.1
RFTN1-203ENST00000432519 PHLDB1Q86UU1 1377 aa21.9■■□□□ 1.1
RFTN1-203ENST00000432519 EFCAB5A4FU69 1503 aa21.88■■□□□ 1.09
RFTN1-203ENST00000432519 MRC2Q9UBG0 1479 aa21.87■■□□□ 1.09
RFTN1-203ENST00000432519 DHX57Q6P158 1386 aaKnown RBP21.87■■□□□ 1.09
RFTN1-203ENST00000432519 CFAP43Q8NDM7 1665 aa21.85■■□□□ 1.09
RFTN1-203ENST00000432519 CASKIN1Q8WXD9 1431 aa21.83■■□□□ 1.08
RFTN1-203ENST00000432519 FYCO1Q9BQS8 1478 aa21.82■■□□□ 1.08
RFTN1-203ENST00000432519 DIEXFQ68CQ4 756 aaKnown RBP21.81■■□□□ 1.08
RFTN1-203ENST00000432519 ZNF608Q9ULD9 1512 aaPredicted RBP21.81■■□□□ 1.08
RFTN1-203ENST00000432519 PBRM1Q86U86 1689 aa21.81■■□□□ 1.08
RFTN1-203ENST00000432519 SNAPC4Q5SXM2 1469 aa21.8■■□□□ 1.08
RFTN1-203ENST00000432519 SAMD9Q5K651 1589 aa21.79■■□□□ 1.08
RFTN1-203ENST00000432519 ZNF316A6NFI3 1004 aaPredicted RBP21.76■■□□□ 1.07
RFTN1-203ENST00000432519 FAM50AQ14320 339 aaKnown RBP21.76■■□□□ 1.07
RFTN1-203ENST00000432519 FMN1Q68DA7 1419 aa21.76■■□□□ 1.07
RFTN1-203ENST00000432519 LRRIQ1Q96JM4 1722 aa21.74■■□□□ 1.07
RFTN1-203ENST00000432519 ADAMTS12P58397 1594 aa21.72■■□□□ 1.07
RFTN1-203ENST00000432519 WDR62O43379 1518 aa21.71■■□□□ 1.07
RFTN1-203ENST00000432519 RAB3GAP2Q9H2M9 1393 aa21.71■■□□□ 1.07
RFTN1-203ENST00000432519 GRIN2BQ13224 1484 aa21.69■■□□□ 1.06
RFTN1-203ENST00000432519 IFT140Q96RY7 1462 aa21.67■■□□□ 1.06
RFTN1-203ENST00000432519 CLSPNQ9HAW4 1339 aa21.65■■□□□ 1.06
RFTN1-203ENST00000432519 ERCC6Q03468 1493 aa21.64■■□□□ 1.06
RFTN1-203ENST00000432519 MTUS2Q5JR59 1369 aa21.63■■□□□ 1.05
RFTN1-203ENST00000432519 IQGAP2Q13576 1575 aa21.63■■□□□ 1.05
RFTN1-203ENST00000432519 SETD5Q9C0A6 1442 aa21.6■■□□□ 1.05
RFTN1-203ENST00000432519 ARID3CA6NKF2 412 aa21.59■■□□□ 1.05
RFTN1-203ENST00000432519 MAGI3Q5TCQ9 1506 aa21.59■■□□□ 1.05
RFTN1-203ENST00000432519 EIF4G3O43432 1585 aaKnown RBP21.58■■□□□ 1.05
RFTN1-203ENST00000432519 FGD6Q6ZV73 1430 aa21.58■■□□□ 1.04
RFTN1-203ENST00000432519 MAPKBP1O60336 1514 aa21.57■■□□□ 1.04
RFTN1-203ENST00000432519 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
RFTN1-203ENST00000432519 NCOA2Q15596 1464 aa21.55■■□□□ 1.04
RFTN1-203ENST00000432519 PTPRKQ15262 1439 aa21.53■■□□□ 1.04
RFTN1-203ENST00000432519 CDK13Q14004 1512 aaKnown RBP21.5■■□□□ 1.03
RFTN1-203ENST00000432519 GRIN2AQ12879 1464 aa21.49■■□□□ 1.03
RFTN1-203ENST00000432519 UGGT2Q9NYU1 1516 aa21.49■■□□□ 1.03
RFTN1-203ENST00000432519 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.49■■□□□ 1.03
RFTN1-203ENST00000432519 DISP1Q96F81 1524 aa21.48■■□□□ 1.03
RFTN1-203ENST00000432519 MYOM3Q5VTT5 1437 aa21.47■■□□□ 1.03
RFTN1-203ENST00000432519 EPRSP07814 1512 aaKnown RBP21.47■■□□□ 1.03
RFTN1-203ENST00000432519 SIN3AQ96ST3 1273 aa21.47■■□□□ 1.03
RFTN1-203ENST00000432519 KIAA0586Q9BVV6 1533 aa21.47■■□□□ 1.03
RFTN1-203ENST00000432519 EHBP1L1Q8N3D4 1523 aa21.46■■□□□ 1.03
RFTN1-203ENST00000432519 MIER1Q8N108 512 aa21.46■■□□□ 1.03
RFTN1-203ENST00000432519 SUPT6HQ7KZ85 1726 aaKnown RBP21.46■■□□□ 1.03
RFTN1-203ENST00000432519 FBLN2P98095 1184 aa21.44■■□□□ 1.02
RFTN1-203ENST00000432519 HECW1Q76N89 1606 aa21.44■■□□□ 1.02
RFTN1-203ENST00000432519 ARHGEF11O15085 1522 aa21.43■■□□□ 1.02
RFTN1-203ENST00000432519 SCAF1Q9H7N4 1312 aaKnown RBP21.43■■□□□ 1.02
RFTN1-203ENST00000432519 CCDC18Q5T9S5 1454 aa21.42■■□□□ 1.02
RFTN1-203ENST00000432519 KIAA0556O60303 1618 aa21.42■■□□□ 1.02
RFTN1-203ENST00000432519 CHMP7Q8WUX9 453 aaPredicted RBP21.42■■□□□ 1.02
RFTN1-203ENST00000432519 NEUROD1Q13562 356 aa21.41■■□□□ 1.02
RFTN1-203ENST00000432519 CEP170Q5SW79 1584 aa21.4■■□□□ 1.02
RFTN1-203ENST00000432519 MAGI1Q96QZ7 1491 aaPredicted RBP21.38■■□□□ 1.01
RFTN1-203ENST00000432519 PTPN23Q9H3S7 1636 aa21.38■■□□□ 1.01
RFTN1-203ENST00000432519 SYNJ2O15056 1496 aa21.36■■□□□ 1.01
RFTN1-203ENST00000432519 HFM1A2PYH4 1435 aa21.34■■□□□ 1.01
RFTN1-203ENST00000432519 CHIC2Q9UKJ5 165 aa21.34■■□□□ 1.01
RFTN1-203ENST00000432519 NUP153P49790 1475 aaKnown RBP21.34■■□□□ 1.01
RFTN1-203ENST00000432519 NAIPQ13075 1403 aa21.34■■□□□ 1.01
RFTN1-203ENST00000432519 ACIN1Q9UKV3 1341 aaKnown RBP21.32■■□□□ 1
RFTN1-203ENST00000432519 YTHDC1Q96MU7 727 aaKnown RBP21.31■■□□□ 1
RFTN1-203ENST00000432519 RRP7BPQ9NSQ0 103 aa21.31■■□□□ 1
RFTN1-203ENST00000432519 PLB1Q6P1J6 1458 aa21.28■■□□□ 1
RFTN1-203ENST00000432519 RAPGEF6Q8TEU7 1601 aa21.28■■□□□ 1
RFTN1-203ENST00000432519 TCOF1Q13428 1488 aaKnown RBP21.27■■□□□ 1
RFTN1-203ENST00000432519 JPH4Q96JJ6 628 aa21.27■■□□□ 1
RFTN1-203ENST00000432519 NUP160Q12769 1436 aa21.26■□□□□ 0.99
RFTN1-203ENST00000432519 ZNF644Q9H582 1327 aaPredicted RBP21.24■□□□□ 0.99
RFTN1-203ENST00000432519 UACAQ9BZF9 1416 aa21.23■□□□□ 0.99
RFTN1-203ENST00000432519 KDM6BO15054 1643 aa21.22■□□□□ 0.99
RFTN1-203ENST00000432519 PRG4Q92954 1404 aaPredicted RBP21.22■□□□□ 0.99
RFTN1-203ENST00000432519 MIA2Q96PC5 1412 aa21.2■□□□□ 0.98
RFTN1-203ENST00000432519 CENPBP07199 599 aaPredicted RBP21.18■□□□□ 0.98
RFTN1-203ENST00000432519 PPP1R15AO75807 674 aaPredicted RBP21.16■□□□□ 0.98
RFTN1-203ENST00000432519 HIRIP3Q9BW71 556 aaPredicted RBP21.15■□□□□ 0.98
RFTN1-203ENST00000432519 DENND4BO75064 1496 aaPredicted RBP21.15■□□□□ 0.98
RFTN1-203ENST00000432519 CARMIL2Q6F5E8 1435 aa21.14■□□□□ 0.97
RFTN1-203ENST00000432519 GCC2Q8IWJ2 1684 aa21.12■□□□□ 0.97
RFTN1-203ENST00000432519 CDK11AQ9UQ88 783 aaPredicted RBP21.12■□□□□ 0.97
RFTN1-203ENST00000432519 KIF14Q15058 1648 aa21.12■□□□□ 0.97
RFTN1-203ENST00000432519 TROQ12816 1431 aaPredicted RBP21.11■□□□□ 0.97
RFTN1-203ENST00000432519 ABCC5O15440 1437 aa21.11■□□□□ 0.97
RFTN1-203ENST00000432519 DAPK1P53355 1430 aa21.11■□□□□ 0.97
RFTN1-203ENST00000432519 TRIM52Q96A61 297 aa21.11■□□□□ 0.97
RFTN1-203ENST00000432519 TIMELESSQ9UNS1 1208 aa21.1■□□□□ 0.97
RFTN1-203ENST00000432519 GTF3C3Q9Y5Q9 886 aa21.09■□□□□ 0.97
RFTN1-203ENST00000432519 TONSLQ96HA7 1378 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms