RNA–Protein interactions for RNA: ENST00000431212.6

NEDD4L-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-206ENST00000431212 ANP32CO43423 234 aa14.54□□□□□ -0.08
NEDD4L-206ENST00000431212 WDR97A6NE52 1622 aa14.54□□□□□ -0.08
NEDD4L-206ENST00000431212 TRIM52Q96A61 297 aa14.54□□□□□ -0.08
NEDD4L-206ENST00000431212 SIN3AQ96ST3 1273 aa14.54□□□□□ -0.08
NEDD4L-206ENST00000431212 TIMELESSQ9UNS1 1208 aa14.53□□□□□ -0.08
NEDD4L-206ENST00000431212 FAM50AQ14320 339 aaKnown RBP14.48□□□□□ -0.09
NEDD4L-206ENST00000431212 HIRIP3Q9BW71 556 aaPredicted RBP14.48□□□□□ -0.09
NEDD4L-206ENST00000431212 TIAM1Q13009 1591 aa14.46□□□□□ -0.09
NEDD4L-206ENST00000431212 MAP3K1Q13233 1512 aa14.46□□□□□ -0.09
NEDD4L-206ENST00000431212 CUX1P39880 1505 aa14.46□□□□□ -0.1
NEDD4L-206ENST00000431212 PHLDB1Q86UU1 1377 aa14.43□□□□□ -0.1
NEDD4L-206ENST00000431212 LRRC9Q6ZRR7 1453 aa14.43□□□□□ -0.1
NEDD4L-206ENST00000431212 MSH5O43196 834 aa14.42□□□□□ -0.1
NEDD4L-206ENST00000431212 CDK11AQ9UQ88 783 aaPredicted RBP14.41□□□□□ -0.1
NEDD4L-206ENST00000431212 ERICH6Q7L0X2 663 aa14.41□□□□□ -0.1
NEDD4L-206ENST00000431212 FANCIQ9NVI1 1328 aa14.4□□□□□ -0.1
NEDD4L-206ENST00000431212 TONSLQ96HA7 1378 aa14.37□□□□□ -0.11
NEDD4L-206ENST00000431212 HNRNPUQ00839 825 aaKnown RBP eCLIP14.36□□□□□ -0.11
NEDD4L-206ENST00000431212 FHAD1B1AJZ9 1412 aa14.35□□□□□ -0.11
NEDD4L-206ENST00000431212 ATP1B4Q9UN42 357 aaPredicted RBP14.34□□□□□ -0.11
NEDD4L-206ENST00000431212 IGF1RP08069 1367 aa14.34□□□□□ -0.11
NEDD4L-206ENST00000431212 IRX6P78412 446 aaPredicted RBP14.33□□□□□ -0.12
NEDD4L-206ENST00000431212 CARMIL1Q5VZK9 1371 aa14.31□□□□□ -0.12
NEDD4L-206ENST00000431212 ERICH6BQ5W0A0 696 aa14.29□□□□□ -0.12
NEDD4L-206ENST00000431212 CFTRP13569 1480 aa14.29□□□□□ -0.12
NEDD4L-206ENST00000431212 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.29□□□□□ -0.122e-19■■■■■ 288.6
NEDD4L-206ENST00000431212 CFAP43Q8NDM7 1665 aa14.28□□□□□ -0.12
NEDD4L-206ENST00000431212 P3H3Q8IVL6 736 aa14.28□□□□□ -0.12
NEDD4L-206ENST00000431212 MYT1LQ9UL68 1186 aa14.28□□□□□ -0.12
NEDD4L-206ENST00000431212 HMGXB3Q12766 1538 aa14.28□□□□□ -0.12
NEDD4L-206ENST00000431212 NCAPD3P42695 1498 aa14.27□□□□□ -0.12
NEDD4L-206ENST00000431212 PPP4R2Q9NY27 417 aa14.26□□□□□ -0.13
NEDD4L-206ENST00000431212 PCF11O94913 1555 aaKnown RBP14.26□□□□□ -0.13
NEDD4L-206ENST00000431212 CCDC18Q5T9S5 1454 aa14.24□□□□□ -0.13
NEDD4L-206ENST00000431212 UACAQ9BZF9 1416 aa14.22□□□□□ -0.13
NEDD4L-206ENST00000431212 FYCO1Q9BQS8 1478 aa14.21□□□□□ -0.14
NEDD4L-206ENST00000431212 FGD6Q6ZV73 1430 aa14.2□□□□□ -0.14
NEDD4L-206ENST00000431212 FHOD3Q2V2M9 1422 aa14.19□□□□□ -0.14
NEDD4L-206ENST00000431212 HFM1A2PYH4 1435 aa14.19□□□□□ -0.14
NEDD4L-206ENST00000431212 CASKIN1Q8WXD9 1431 aa14.18□□□□□ -0.14
NEDD4L-206ENST00000431212 FGD5Q6ZNL6 1462 aa14.18□□□□□ -0.14
NEDD4L-206ENST00000431212 WASHC2AQ641Q2 1341 aa14.18□□□□□ -0.14
NEDD4L-206ENST00000431212 HSPA5P11021 654 aaKnown RBP14.17□□□□□ -0.14
NEDD4L-206ENST00000431212 DEKP35659 375 aaKnown RBP14.16□□□□□ -0.14
NEDD4L-206ENST00000431212 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.144e-8■■■□□ 16.5
NEDD4L-206ENST00000431212 B4GALNT3Q6L9W6 998 aa14.15□□□□□ -0.14
NEDD4L-206ENST00000431212 PTPN23Q9H3S7 1636 aa14.15□□□□□ -0.14
NEDD4L-206ENST00000431212 EIF4G2P78344 907 aaKnown RBP eCLIP14.14□□□□□ -0.15
NEDD4L-206ENST00000431212 PTPRKQ15262 1439 aa14.14□□□□□ -0.15
NEDD4L-206ENST00000431212 EFCAB5A4FU69 1503 aa14.14□□□□□ -0.15
NEDD4L-206ENST00000431212 MTUS2Q5JR59 1369 aa14.13□□□□□ -0.15
NEDD4L-206ENST00000431212 FAM9BQ8IZU0 186 aa14.13□□□□□ -0.15
NEDD4L-206ENST00000431212 NAIPQ13075 1403 aa14.13□□□□□ -0.15
NEDD4L-206ENST00000431212 KDM5BQ9UGL1 1544 aa14.12□□□□□ -0.15
NEDD4L-206ENST00000431212 CCDC184Q52MB2 194 aa14.12□□□□□ -0.15
NEDD4L-206ENST00000431212 CNTLNQ9NXG0 1405 aa14.11□□□□□ -0.15
NEDD4L-206ENST00000431212 PRDM2Q13029 1718 aa14.11□□□□□ -0.15
NEDD4L-206ENST00000431212 FMN1Q68DA7 1419 aa14.11□□□□□ -0.15
NEDD4L-206ENST00000431212 NOP58Q9Y2X3 529 aaKnown RBP14.11□□□□□ -0.15
NEDD4L-206ENST00000431212 ZBED9Q6R2W3 1325 aa14.11□□□□□ -0.15
NEDD4L-206ENST00000431212 MRS2Q9HD23 443 aa14.1□□□□□ -0.15
NEDD4L-206ENST00000431212 NCOA2Q15596 1464 aa14.09□□□□□ -0.15
NEDD4L-206ENST00000431212 PRKRIP1Q9H875 184 aaPredicted RBP14.09□□□□□ -0.15
NEDD4L-206ENST00000431212 CADPSQ9ULU8 1353 aa14.07□□□□□ -0.16
NEDD4L-206ENST00000431212 MYOM3Q5VTT5 1437 aa14.06□□□□□ -0.16
NEDD4L-206ENST00000431212 NBR1Q14596 966 aa14.06□□□□□ -0.16
NEDD4L-206ENST00000431212 RRP7BPQ9NSQ0 103 aa14.04□□□□□ -0.16
NEDD4L-206ENST00000431212 CCDC7Q96M83 1385 aa14.04□□□□□ -0.16
NEDD4L-206ENST00000431212 SNAPC4Q5SXM2 1469 aa14.03□□□□□ -0.16
NEDD4L-206ENST00000431212 C11orf95C9JLR9 678 aaPredicted RBP14.02□□□□□ -0.16
NEDD4L-206ENST00000431212 PAK3O75914 559 aaPredicted RBP14.02□□□□□ -0.16
NEDD4L-206ENST00000431212 NCOA1Q15788 1441 aa14.02□□□□□ -0.16
NEDD4L-206ENST00000431212 ANP32AP39687 249 aaKnown RBP14.01□□□□□ -0.17
NEDD4L-206ENST00000431212 L3MBTL2Q969R5 705 aa14.01□□□□□ -0.17
NEDD4L-206ENST00000431212 CHIC2Q9UKJ5 165 aa14.01□□□□□ -0.17
NEDD4L-206ENST00000431212 CCDC136Q96JN2 1154 aa13.99□□□□□ -0.17
NEDD4L-206ENST00000431212 CTTNBP2Q8WZ74 1663 aa13.99□□□□□ -0.17
NEDD4L-206ENST00000431212 RTL5Q5HYW3 569 aaPredicted RBP13.98□□□□□ -0.17
NEDD4L-206ENST00000431212 SUPT6HQ7KZ85 1726 aaKnown RBP13.98□□□□□ -0.17
NEDD4L-206ENST00000431212 MPHOSPH9Q99550 1183 aa13.98□□□□□ -0.17
NEDD4L-206ENST00000431212 RAD54L2Q9Y4B4 1467 aa13.98□□□□□ -0.17
NEDD4L-206ENST00000431212 IPO9Q96P70 1041 aaKnown RBP13.98□□□□□ -0.17
NEDD4L-206ENST00000431212 HECW1Q76N89 1606 aa13.97□□□□□ -0.17
NEDD4L-206ENST00000431212 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
NEDD4L-206ENST00000431212 ABCA10Q8WWZ4 1543 aa13.97□□□□□ -0.17
NEDD4L-206ENST00000431212 SMG6Q86US8 1419 aaKnown RBP13.97□□□□□ -0.17
NEDD4L-206ENST00000431212 CUL7Q14999 1698 aa13.97□□□□□ -0.17
NEDD4L-206ENST00000431212 ZBTB47Q9UFB7 747 aaPredicted RBP13.97□□□□□ -0.17
NEDD4L-206ENST00000431212 DENND4BO75064 1496 aaPredicted RBP13.96□□□□□ -0.17
NEDD4L-206ENST00000431212 EHBP1L1Q8N3D4 1523 aa13.96□□□□□ -0.17
NEDD4L-206ENST00000431212 AKNAQ7Z591 1439 aa13.95□□□□□ -0.18
NEDD4L-206ENST00000431212 KIF7Q2M1P5 1343 aa13.95□□□□□ -0.18
NEDD4L-206ENST00000431212 NUDCQ9Y266 331 aa13.95□□□□□ -0.18
NEDD4L-206ENST00000431212 GRIN2BQ13224 1484 aa13.94□□□□□ -0.18
NEDD4L-206ENST00000431212 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
NEDD4L-206ENST00000431212 UGGT2Q9NYU1 1516 aa13.93□□□□□ -0.18
NEDD4L-206ENST00000431212 GCC2Q8IWJ2 1684 aa13.93□□□□□ -0.18
NEDD4L-206ENST00000431212 FOXD1Q16676 465 aa13.93□□□□□ -0.18
NEDD4L-206ENST00000431212 THOC2Q8NI27 1593 aaKnown RBP13.93□□□□□ -0.18
NEDD4L-206ENST00000431212 NBPF8Q3BBV2 869 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms