RNA–Protein interactions for RNA: ENST00000431212.6

NEDD4L-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-206ENST00000431212 NISCHQ9Y2I1 1504 aa19.98■□□□□ 0.79
NEDD4L-206ENST00000431212 SHROOM4Q9ULL8 1493 aa17.47■□□□□ 0.39
NEDD4L-206ENST00000431212 SUPT5HO00267 1087 aaKnown RBP17.37■□□□□ 0.37
NEDD4L-206ENST00000431212 HRCP23327 699 aa17.29■□□□□ 0.36
NEDD4L-206ENST00000431212 MYO15BQ96JP2 1530 aa17.05■□□□□ 0.32
NEDD4L-206ENST00000431212 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
NEDD4L-206ENST00000431212 PCGF6Q9BYE7 350 aa17.02■□□□□ 0.32
NEDD4L-206ENST00000431212 ZCCHC6Q5VYS8 1495 aaKnown RBP16.97■□□□□ 0.31
NEDD4L-206ENST00000431212 PPARGC1BQ86YN6 1023 aaKnown RBP16.87■□□□□ 0.29
NEDD4L-206ENST00000431212 DCAF1Q9Y4B6 1507 aa16.74■□□□□ 0.27
NEDD4L-206ENST00000431212 CCDC180Q9P1Z9 1646 aa16.72■□□□□ 0.27
NEDD4L-206ENST00000431212 DCAF8L2P0C7V8 631 aa16.63■□□□□ 0.25
NEDD4L-206ENST00000431212 LOC105371045A0A1W2PR82 267 aa16.59■□□□□ 0.25
NEDD4L-206ENST00000431212 TRIM26Q12899 539 aaPredicted RBP16.58■□□□□ 0.24
NEDD4L-206ENST00000431212 PELP1Q8IZL8 1130 aaKnown RBP16.48■□□□□ 0.23
NEDD4L-206ENST00000431212 ZEB1P37275 1124 aaPredicted RBP16.43■□□□□ 0.22
NEDD4L-206ENST00000431212 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
NEDD4L-206ENST00000431212 TRIM41Q8WV44 630 aa16.14■□□□□ 0.17
NEDD4L-206ENST00000431212 ABCC9O60706 1549 aa16.1■□□□□ 0.17
NEDD4L-206ENST00000431212 FAM9AQ8IZU1 332 aaPredicted RBP16.05■□□□□ 0.16
NEDD4L-206ENST00000431212 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
NEDD4L-206ENST00000431212 EHMT2Q96KQ7 1210 aa15.93■□□□□ 0.14
NEDD4L-206ENST00000431212 ACIN1Q9UKV3 1341 aaKnown RBP15.93■□□□□ 0.14
NEDD4L-206ENST00000431212 RB1CC1Q8TDY2 1594 aa15.89■□□□□ 0.13
NEDD4L-206ENST00000431212 NEUROD1Q13562 356 aa15.85■□□□□ 0.13
NEDD4L-206ENST00000431212 CCER1Q8TC90 406 aaPredicted RBP15.85■□□□□ 0.13
NEDD4L-206ENST00000431212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.83■□□□□ 0.13
NEDD4L-206ENST00000431212 SCRIBQ14160 1630 aa15.83■□□□□ 0.12
NEDD4L-206ENST00000431212 CENPBP07199 599 aaPredicted RBP15.81■□□□□ 0.12
NEDD4L-206ENST00000431212 MYT1Q01538 1121 aa15.81■□□□□ 0.12
NEDD4L-206ENST00000431212 DIEXFQ68CQ4 756 aaKnown RBP15.77■□□□□ 0.12
NEDD4L-206ENST00000431212 GTF3C3Q9Y5Q9 886 aa15.77■□□□□ 0.12
NEDD4L-206ENST00000431212 CECR2Q9BXF3 1484 aa15.59■□□□□ 0.09
NEDD4L-206ENST00000431212 MROH2BQ7Z745 1585 aa15.57■□□□□ 0.08
NEDD4L-206ENST00000431212 TTBK1Q5TCY1 1321 aaPredicted RBP15.53■□□□□ 0.08
NEDD4L-206ENST00000431212 ZNF316A6NFI3 1004 aaPredicted RBP15.53■□□□□ 0.08
NEDD4L-206ENST00000431212 WRNQ14191 1432 aaPredicted RBP eCLIP15.53■□□□□ 0.08
NEDD4L-206ENST00000431212 WIZO95785 1651 aa15.5■□□□□ 0.07
NEDD4L-206ENST00000431212 YTHDC1Q96MU7 727 aaKnown RBP15.46■□□□□ 0.06
NEDD4L-206ENST00000431212 CEP162Q5TB80 1403 aa15.45■□□□□ 0.06
NEDD4L-206ENST00000431212 EIF4G1Q04637 1599 aaKnown RBP15.42■□□□□ 0.06
NEDD4L-206ENST00000431212 BAZ1AQ9NRL2 1556 aaPredicted RBP15.42■□□□□ 0.06
NEDD4L-206ENST00000431212 NACADO15069 1562 aa15.4■□□□□ 0.06
NEDD4L-206ENST00000431212 TNIKQ9UKE5 1360 aa15.39■□□□□ 0.05
NEDD4L-206ENST00000431212 CCDC88BA6NC98 1476 aa15.37■□□□□ 0.05
NEDD4L-206ENST00000431212 MIER1Q8N108 512 aa15.35■□□□□ 0.05
NEDD4L-206ENST00000431212 ABCC8Q09428 1581 aa15.34■□□□□ 0.05
NEDD4L-206ENST00000431212 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.04
NEDD4L-206ENST00000431212 SOGA1O94964 1423 aa15.31■□□□□ 0.04
NEDD4L-206ENST00000431212 CSRNP3Q8WYN3 585 aa15.3■□□□□ 0.04
NEDD4L-206ENST00000431212 EEA1Q15075 1411 aa15.29■□□□□ 0.04
NEDD4L-206ENST00000431212 TOP2AP11388 1531 aaKnown RBP15.25■□□□□ 0.03
NEDD4L-206ENST00000431212 HNRNPUL2Q1KMD3 747 aaKnown RBP15.25■□□□□ 0.03
NEDD4L-206ENST00000431212 GOLGA3Q08378 1498 aa15.22■□□□□ 0.03
NEDD4L-206ENST00000431212 RUSC2Q8N2Y8 1516 aa15.19■□□□□ 0.02
NEDD4L-206ENST00000431212 SMARCA2P51531 1590 aa15.18■□□□□ 0.02
NEDD4L-206ENST00000431212 CLSPNQ9HAW4 1339 aa15.14■□□□□ 0.01
NEDD4L-206ENST00000431212 APLP2Q06481 763 aa15.12■□□□□ 0.01
NEDD4L-206ENST00000431212 SMARCA4P51532 1647 aa15.12■□□□□ 0.01
NEDD4L-206ENST00000431212 CLIP1P30622 1438 aa15.09■□□□□ 0.01
NEDD4L-206ENST00000431212 CEP164Q9UPV0 1460 aa15.08■□□□□ 0.01
NEDD4L-206ENST00000431212 SUPT16HQ9Y5B9 1047 aaKnown RBP15.06■□□□□ 0
NEDD4L-206ENST00000431212 VPS8Q8N3P4 1428 aa15.06■□□□□ 0
NEDD4L-206ENST00000431212 KIF21BO75037 1637 aa15.02□□□□□ -0.01
NEDD4L-206ENST00000431212 BAZ1BQ9UIG0 1483 aaKnown RBP14.96□□□□□ -0.01
NEDD4L-206ENST00000431212 DHX57Q6P158 1386 aaKnown RBP14.95□□□□□ -0.02
NEDD4L-206ENST00000431212 RANGAP1P46060 587 aaPredicted RBP14.94□□□□□ -0.02
NEDD4L-206ENST00000431212 TSHZ2Q9NRE2 1034 aa14.93□□□□□ -0.02
NEDD4L-206ENST00000431212 SYNJ1O43426 1573 aa14.91□□□□□ -0.02
NEDD4L-206ENST00000431212 ANP32EQ9BTT0 268 aa14.91□□□□□ -0.02
NEDD4L-206ENST00000431212 RAPGEF2Q9Y4G8 1499 aa14.9□□□□□ -0.02
NEDD4L-206ENST00000431212 UNC13AQ9UPW8 1703 aa14.8□□□□□ -0.04
NEDD4L-206ENST00000431212 KANK4Q5T7N3 995 aaPredicted RBP14.78□□□□□ -0.04
NEDD4L-206ENST00000431212 PEG3Q9GZU2 1588 aa14.77□□□□□ -0.05
NEDD4L-206ENST00000431212 RRBP1Q9P2E9 1410 aaKnown RBP14.75□□□□□ -0.05
NEDD4L-206ENST00000431212 BCANQ96GW7 911 aa14.75□□□□□ -0.05
NEDD4L-206ENST00000431212 KCNH8Q96L42 1107 aa14.74□□□□□ -0.05
NEDD4L-206ENST00000431212 ARAP1Q96P48 1450 aa14.74□□□□□ -0.05
NEDD4L-206ENST00000431212 CUX2O14529 1486 aa14.72□□□□□ -0.05
NEDD4L-206ENST00000431212 FKBP8Q14318 412 aa14.72□□□□□ -0.05
NEDD4L-206ENST00000431212 PABPN1Q86U42 306 aaKnown RBP eCLIP14.72□□□□□ -0.051e-13■■□□□ 13
NEDD4L-206ENST00000431212 ERICH3Q5RHP9 1530 aa14.71□□□□□ -0.05
NEDD4L-206ENST00000431212 CCNB3Q8WWL7 1395 aa14.71□□□□□ -0.06
NEDD4L-206ENST00000431212 BCL11AQ9H165 835 aa14.7□□□□□ -0.06
NEDD4L-206ENST00000431212 ITGAEP38570 1179 aa14.69□□□□□ -0.06
NEDD4L-206ENST00000431212 TOP2BQ02880 1626 aa14.69□□□□□ -0.06
NEDD4L-206ENST00000431212 PRXQ9BXM0 1461 aa14.68□□□□□ -0.06
NEDD4L-206ENST00000431212 NEFLP07196 543 aa14.68□□□□□ -0.06
NEDD4L-206ENST00000431212 DDX10Q13206 875 aaKnown RBP14.64□□□□□ -0.07
NEDD4L-206ENST00000431212 ATAD2BQ9ULI0 1458 aa14.64□□□□□ -0.07
NEDD4L-206ENST00000431212 RAB3GAP2Q9H2M9 1393 aa14.64□□□□□ -0.07
NEDD4L-206ENST00000431212 RBM19Q9Y4C8 960 aaKnown RBP14.62□□□□□ -0.07
NEDD4L-206ENST00000431212 BICRAQ9NZM4 1560 aa14.62□□□□□ -0.07
NEDD4L-206ENST00000431212 MAPKBP1O60336 1514 aa14.6□□□□□ -0.07
NEDD4L-206ENST00000431212 BIVM-ERCC5R4GMW8 1640 aa14.6□□□□□ -0.07
NEDD4L-206ENST00000431212 SETD5Q9C0A6 1442 aa14.56□□□□□ -0.08
NEDD4L-206ENST00000431212 PPP1R15AO75807 674 aaPredicted RBP14.56□□□□□ -0.08
NEDD4L-206ENST00000431212 KIF27Q86VH2 1401 aa14.55□□□□□ -0.08
NEDD4L-206ENST00000431212 CCER2I3L3R5 266 aa14.55□□□□□ -0.08
NEDD4L-206ENST00000431212 ARHGAP35Q9NRY4 1499 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms