RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 CHMP7Q8WUX9 453 aaPredicted RBP20.28■□□□□ 0.84
SYNGAP1-203ENST00000428982 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.28■□□□□ 0.84
SYNGAP1-203ENST00000428982 CARMIL1Q5VZK9 1371 aa20.28■□□□□ 0.84
SYNGAP1-203ENST00000428982 CDK11AQ9UQ88 783 aaPredicted RBP20.26■□□□□ 0.83
SYNGAP1-203ENST00000428982 UBE2Q2Q8WVN8 375 aa20.26■□□□□ 0.83
SYNGAP1-203ENST00000428982 SALL2Q9Y467 1007 aaPredicted RBP20.26■□□□□ 0.83
SYNGAP1-203ENST00000428982 SYNJ1O43426 1573 aa20.25■□□□□ 0.83
SYNGAP1-203ENST00000428982 GLIPR1L2Q4G1C9 344 aa20.25■□□□□ 0.83
SYNGAP1-203ENST00000428982 FGD5Q6ZNL6 1462 aa20.25■□□□□ 0.83
SYNGAP1-203ENST00000428982 LAMC3Q9Y6N6 1575 aa20.24■□□□□ 0.83
SYNGAP1-203ENST00000428982 RTN4Q9NQC3 1192 aaKnown RBP20.23■□□□□ 0.83
SYNGAP1-203ENST00000428982 TDRD9Q8NDG6 1382 aaKnown RBP20.23■□□□□ 0.83
SYNGAP1-203ENST00000428982 NBR1Q14596 966 aa20.22■□□□□ 0.83
SYNGAP1-203ENST00000428982 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
SYNGAP1-203ENST00000428982 TOP2BQ02880 1626 aa20.19■□□□□ 0.82
SYNGAP1-203ENST00000428982 CUX1P39880 1505 aa20.16■□□□□ 0.82
SYNGAP1-203ENST00000428982 PKNOX2Q96KN3 472 aa20.13■□□□□ 0.81
SYNGAP1-203ENST00000428982 ITGAEP38570 1179 aa20.13■□□□□ 0.81
SYNGAP1-203ENST00000428982 TOPBP1Q92547 1522 aa20.1■□□□□ 0.81
SYNGAP1-203ENST00000428982 RAD54L2Q9Y4B4 1467 aa20.1■□□□□ 0.81
SYNGAP1-203ENST00000428982 VPS8Q8N3P4 1428 aa20.09■□□□□ 0.81
SYNGAP1-203ENST00000428982 MRC2Q9UBG0 1479 aa20.08■□□□□ 0.81
SYNGAP1-203ENST00000428982 DNMBPQ6XZF7 1577 aa20.08■□□□□ 0.8
SYNGAP1-203ENST00000428982 RAPGEF2Q9Y4G8 1499 aa20.08■□□□□ 0.8
SYNGAP1-203ENST00000428982 IGF1RP08069 1367 aa20.02■□□□□ 0.79
SYNGAP1-203ENST00000428982 POLA1P09884 1462 aaPredicted RBP20.01■□□□□ 0.79
SYNGAP1-203ENST00000428982 GAPVD1Q14C86 1478 aa20.01■□□□□ 0.79
SYNGAP1-203ENST00000428982 ARID3CA6NKF2 412 aa20.01■□□□□ 0.79
SYNGAP1-203ENST00000428982 FAM50AQ14320 339 aaKnown RBP20.01■□□□□ 0.79
SYNGAP1-203ENST00000428982 PODXL2Q9NZ53 605 aa20.01■□□□□ 0.79
SYNGAP1-203ENST00000428982 BIVM-ERCC5R4GMW8 1640 aa19.96■□□□□ 0.79
SYNGAP1-203ENST00000428982 DAXXQ9UER7 740 aaPredicted RBP19.93■□□□□ 0.78
SYNGAP1-203ENST00000428982 KIF21BO75037 1637 aa19.92■□□□□ 0.78
SYNGAP1-203ENST00000428982 FHAD1B1AJZ9 1412 aa19.9■□□□□ 0.78
SYNGAP1-203ENST00000428982 IFT140Q96RY7 1462 aa19.89■□□□□ 0.78
SYNGAP1-203ENST00000428982 URB2Q14146 1524 aaKnown RBP19.89■□□□□ 0.77
SYNGAP1-203ENST00000428982 AQRO60306 1485 aaKnown RBP eCLIP19.88■□□□□ 0.772e-6■■■■■ 32.4
SYNGAP1-203ENST00000428982 FANCIQ9NVI1 1328 aa19.87■□□□□ 0.77
SYNGAP1-203ENST00000428982 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
SYNGAP1-203ENST00000428982 MTUS2Q5JR59 1369 aa19.86■□□□□ 0.77
SYNGAP1-203ENST00000428982 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
SYNGAP1-203ENST00000428982 PRDM2Q13029 1718 aa19.84■□□□□ 0.77
SYNGAP1-203ENST00000428982 MSH5O43196 834 aa19.83■□□□□ 0.77
SYNGAP1-203ENST00000428982 GRIN2BQ13224 1484 aa19.83■□□□□ 0.77
SYNGAP1-203ENST00000428982 PRXQ9BXM0 1461 aa19.83■□□□□ 0.77
SYNGAP1-203ENST00000428982 NOP58Q9Y2X3 529 aaKnown RBP19.83■□□□□ 0.76
SYNGAP1-203ENST00000428982 ANP32AP39687 249 aaKnown RBP19.82■□□□□ 0.76
SYNGAP1-203ENST00000428982 IL27Q8NEV9 243 aa19.77■□□□□ 0.76
SYNGAP1-203ENST00000428982 FMN1Q68DA7 1419 aa19.76■□□□□ 0.75
SYNGAP1-203ENST00000428982 CARMIL2Q6F5E8 1435 aa19.76■□□□□ 0.75
SYNGAP1-203ENST00000428982 ZBTB47Q9UFB7 747 aaPredicted RBP19.74■□□□□ 0.75
SYNGAP1-203ENST00000428982 PLEKHG5O94827 1062 aa19.73■□□□□ 0.75
SYNGAP1-203ENST00000428982 NPM1P06748 294 aaKnown RBP eCLIP19.72■□□□□ 0.75
SYNGAP1-203ENST00000428982 KIF21AQ7Z4S6 1674 aa19.72■□□□□ 0.75
SYNGAP1-203ENST00000428982 FHOD3Q2V2M9 1422 aa19.71■□□□□ 0.75
SYNGAP1-203ENST00000428982 CCNB3Q8WWL7 1395 aa19.71■□□□□ 0.75
SYNGAP1-203ENST00000428982 VSIG10Q8N0Z9 540 aa19.69■□□□□ 0.74
SYNGAP1-203ENST00000428982 ZNF777Q9ULD5 760 aaPredicted RBP19.69■□□□□ 0.74
SYNGAP1-203ENST00000428982 ANP32CO43423 234 aa19.69■□□□□ 0.74
SYNGAP1-203ENST00000428982 PLEKHD1A6NEE1 506 aa19.67■□□□□ 0.74
SYNGAP1-203ENST00000428982 JPH4Q96JJ6 628 aa19.67■□□□□ 0.74
SYNGAP1-203ENST00000428982 DHX57Q6P158 1386 aaKnown RBP19.65■□□□□ 0.74
SYNGAP1-203ENST00000428982 CUL7Q14999 1698 aa19.64■□□□□ 0.74
SYNGAP1-203ENST00000428982 TIMELESSQ9UNS1 1208 aa19.64■□□□□ 0.73
SYNGAP1-203ENST00000428982 SNAPC4Q5SXM2 1469 aa19.63■□□□□ 0.73
SYNGAP1-203ENST00000428982 TRIM52Q96A61 297 aa19.62■□□□□ 0.73
SYNGAP1-203ENST00000428982 NEFMP07197 916 aa19.61■□□□□ 0.73
SYNGAP1-203ENST00000428982 KANK4Q5T7N3 995 aaPredicted RBP19.58■□□□□ 0.73
SYNGAP1-203ENST00000428982 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
SYNGAP1-203ENST00000428982 IRX6P78412 446 aaPredicted RBP19.57■□□□□ 0.72
SYNGAP1-203ENST00000428982 RSPH6AQ9H0K4 717 aa19.56■□□□□ 0.72
SYNGAP1-203ENST00000428982 ARHGAP35Q9NRY4 1499 aa19.55■□□□□ 0.72
SYNGAP1-203ENST00000428982 WDR62O43379 1518 aa19.54■□□□□ 0.72
SYNGAP1-203ENST00000428982 SETD5Q9C0A6 1442 aa19.51■□□□□ 0.71
SYNGAP1-203ENST00000428982 MAGI1Q96QZ7 1491 aaPredicted RBP19.51■□□□□ 0.71
SYNGAP1-203ENST00000428982 EFCAB5A4FU69 1503 aa19.51■□□□□ 0.71
SYNGAP1-203ENST00000428982 TONSLQ96HA7 1378 aa19.51■□□□□ 0.71
SYNGAP1-203ENST00000428982 ARAP1Q96P48 1450 aa19.51■□□□□ 0.71
SYNGAP1-203ENST00000428982 KCNH8Q96L42 1107 aa19.5■□□□□ 0.71
SYNGAP1-203ENST00000428982 RRBP1Q9P2E9 1410 aaKnown RBP19.5■□□□□ 0.71
SYNGAP1-203ENST00000428982 DDX10Q13206 875 aaKnown RBP19.49■□□□□ 0.71
SYNGAP1-203ENST00000428982 A0A0U1RQG5 324 aaPredicted RBP19.48■□□□□ 0.71
SYNGAP1-203ENST00000428982 SYNJ2O15056 1496 aa19.47■□□□□ 0.71
SYNGAP1-203ENST00000428982 CFDP1Q9UEE9 299 aaPredicted RBP19.47■□□□□ 0.71
SYNGAP1-203ENST00000428982 CHIC2Q9UKJ5 165 aa19.47■□□□□ 0.71
SYNGAP1-203ENST00000428982 NPM2Q86SE8 214 aaKnown RBP19.47■□□□□ 0.71
SYNGAP1-203ENST00000428982 TSPY4P0CV99 314 aa19.44■□□□□ 0.7
SYNGAP1-203ENST00000428982 TSPY10P0CW01 314 aa19.44■□□□□ 0.7
SYNGAP1-203ENST00000428982 OSCARQ8IYS5 282 aa19.44■□□□□ 0.7
SYNGAP1-203ENST00000428982 KIAA0586Q9BVV6 1533 aa19.44■□□□□ 0.7
SYNGAP1-203ENST00000428982 RAB3GAP2Q9H2M9 1393 aa19.44■□□□□ 0.7
SYNGAP1-203ENST00000428982 PTPRGP23470 1445 aa19.44■□□□□ 0.7
SYNGAP1-203ENST00000428982 GRIN2AQ12879 1464 aa19.43■□□□□ 0.7
SYNGAP1-203ENST00000428982 CCER2I3L3R5 266 aa19.41■□□□□ 0.7
SYNGAP1-203ENST00000428982 IQGAP2Q13576 1575 aa19.41■□□□□ 0.7
SYNGAP1-203ENST00000428982 CASKIN1Q8WXD9 1431 aa19.4■□□□□ 0.7
SYNGAP1-203ENST00000428982 ZMYND15Q9H091 742 aa19.4■□□□□ 0.7
SYNGAP1-203ENST00000428982 LAS1LQ9Y4W2 734 aaKnown RBP19.39■□□□□ 0.69
SYNGAP1-203ENST00000428982 PPP4R2Q9NY27 417 aa19.37■□□□□ 0.69
SYNGAP1-203ENST00000428982 CCDC18Q5T9S5 1454 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms