RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 RIMBP3CA6NJZ7 1639 aa36.97■■■■□ 3.51
PTPN18-205ENST00000428843 RIMBP3BA6NNM3 1639 aa36.97■■■■□ 3.51
PTPN18-205ENST00000428843 RIMBP3Q9UFD9 1639 aa36.97■■■■□ 3.51
PTPN18-205ENST00000428843 SHROOM2Q13796 1616 aa36.96■■■■□ 3.51
PTPN18-205ENST00000428843 KIF21BO75037 1637 aa36.92■■■■□ 3.5
PTPN18-205ENST00000428843 JPH4Q96JJ6 628 aa36.88■■■■□ 3.49
PTPN18-205ENST00000428843 CTTNBP2Q8WZ74 1663 aa36.86■■■■□ 3.49
PTPN18-205ENST00000428843 IQGAP2Q13576 1575 aa36.86■■■■□ 3.49
PTPN18-205ENST00000428843 ERCC6L2Q5T890 1561 aa36.81■■■■□ 3.48
PTPN18-205ENST00000428843 PRG4Q92954 1404 aaPredicted RBP36.79■■■■□ 3.48
PTPN18-205ENST00000428843 ARAP1Q96P48 1450 aa36.73■■■■□ 3.47
PTPN18-205ENST00000428843 GOLGA3Q08378 1498 aa36.71■■■■□ 3.47
PTPN18-205ENST00000428843 EHMT2Q96KQ7 1210 aa36.71■■■■□ 3.47
PTPN18-205ENST00000428843 UGGT2Q9NYU1 1516 aa36.66■■■■□ 3.46
PTPN18-205ENST00000428843 CYB5RLQ6IPT4 315 aa36.61■■■■□ 3.45
PTPN18-205ENST00000428843 UBTFP17480 764 aaKnown RBP36.58■■■■□ 3.45
PTPN18-205ENST00000428843 CARMIL2Q6F5E8 1435 aa36.58■■■■□ 3.45
PTPN18-205ENST00000428843 DISP1Q96F81 1524 aa36.57■■■■□ 3.44
PTPN18-205ENST00000428843 KIAA0556O60303 1618 aa36.51■■■■□ 3.43
PTPN18-205ENST00000428843 TNIKQ9UKE5 1360 aa36.44■■■■□ 3.42
PTPN18-205ENST00000428843 RANGAP1P46060 587 aaPredicted RBP36.41■■■■□ 3.42
PTPN18-205ENST00000428843 SAMD9Q5K651 1589 aa36.39■■■■□ 3.42
PTPN18-205ENST00000428843 PTPRGP23470 1445 aa36.38■■■■□ 3.41
PTPN18-205ENST00000428843 TTBK1Q5TCY1 1321 aaPredicted RBP36.36■■■■□ 3.41
PTPN18-205ENST00000428843 P3H3Q8IVL6 736 aa36.31■■■■□ 3.4
PTPN18-205ENST00000428843 EFCAB5A4FU69 1503 aa36.28■■■■□ 3.4
PTPN18-205ENST00000428843 LOC105371045A0A1W2PR82 267 aa36.25■■■■□ 3.39
PTPN18-205ENST00000428843 ADCY10Q96PN6 1610 aa36.21■■■■□ 3.39
PTPN18-205ENST00000428843 FHOD3Q2V2M9 1422 aa36.19■■■■□ 3.38
PTPN18-205ENST00000428843 ARHGAP35Q9NRY4 1499 aa36.17■■■■□ 3.38
PTPN18-205ENST00000428843 UACAQ9BZF9 1416 aa36.16■■■■□ 3.38
PTPN18-205ENST00000428843 UHRF1BP1LA0JNW5 1464 aa36.11■■■■□ 3.37
PTPN18-205ENST00000428843 PLB1Q6P1J6 1458 aa36.11■■■■□ 3.37
PTPN18-205ENST00000428843 ABCC2Q92887 1545 aa36.09■■■■□ 3.37
PTPN18-205ENST00000428843 ABCA8O94911 1581 aa36.09■■■■□ 3.37
PTPN18-205ENST00000428843 CLIP1P30622 1438 aa36.06■■■■□ 3.36
PTPN18-205ENST00000428843 NPM1P06748 294 aaKnown RBP eCLIP36■■■■□ 3.35
PTPN18-205ENST00000428843 CEP162Q5TB80 1403 aa36■■■■□ 3.35
PTPN18-205ENST00000428843 RAPGEF6Q8TEU7 1601 aa35.97■■■■□ 3.35
PTPN18-205ENST00000428843 KDM5BQ9UGL1 1544 aa35.93■■■■□ 3.34
PTPN18-205ENST00000428843 FMN1Q68DA7 1419 aa35.92■■■■□ 3.34
PTPN18-205ENST00000428843 ZCCHC11Q5TAX3 1644 aaKnown RBP35.9■■■■□ 3.34
PTPN18-205ENST00000428843 MAPKBP1O60336 1514 aa35.88■■■■□ 3.33
PTPN18-205ENST00000428843 NUP153P49790 1475 aaKnown RBP35.82■■■■□ 3.32
PTPN18-205ENST00000428843 ARID3CA6NKF2 412 aa35.8■■■■□ 3.32
PTPN18-205ENST00000428843 ATP10BO94823 1461 aa35.79■■■■□ 3.32
PTPN18-205ENST00000428843 ASXL2Q76L83 1435 aa35.76■■■■□ 3.32
PTPN18-205ENST00000428843 TRHP20396 242 aaPredicted RBP35.75■■■■□ 3.31
PTPN18-205ENST00000428843 HECW1Q76N89 1606 aa35.75■■■■□ 3.31
PTPN18-205ENST00000428843 PCF11O94913 1555 aaKnown RBP35.73■■■■□ 3.31
PTPN18-205ENST00000428843 ATP1B4Q9UN42 357 aaPredicted RBP35.71■■■■□ 3.31
PTPN18-205ENST00000428843 CASKIN1Q8WXD9 1431 aa35.69■■■■□ 3.3
PTPN18-205ENST00000428843 ABCC10Q5T3U5 1492 aa35.66■■■■□ 3.3
PTPN18-205ENST00000428843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.65■■■■□ 3.3
PTPN18-205ENST00000428843 HNRNPUL2Q1KMD3 747 aaKnown RBP35.65■■■■□ 3.3
PTPN18-205ENST00000428843 KIF13AQ9H1H9 1805 aa35.64■■■■□ 3.3
PTPN18-205ENST00000428843 DIP2BQ9P265 1576 aa35.64■■■■□ 3.3
PTPN18-205ENST00000428843 LRRIQ1Q96JM4 1722 aa35.63■■■■□ 3.29
PTPN18-205ENST00000428843 EPRSP07814 1512 aaKnown RBP35.63■■■■□ 3.29
PTPN18-205ENST00000428843 CDK13Q14004 1512 aaKnown RBP35.63■■■■□ 3.29
PTPN18-205ENST00000428843 FYCO1Q9BQS8 1478 aa35.63■■■■□ 3.29
PTPN18-205ENST00000428843 WDR7Q9Y4E6 1490 aa35.63■■■■□ 3.29
PTPN18-205ENST00000428843 FAM69CQ0P6D2 419 aa35.57■■■■□ 3.28
PTPN18-205ENST00000428843 VPS8Q8N3P4 1428 aa35.53■■■■□ 3.28
PTPN18-205ENST00000428843 CCDC18Q5T9S5 1454 aa35.51■■■■□ 3.28
PTPN18-205ENST00000428843 GLI2P10070 1586 aa35.51■■■■□ 3.27
PTPN18-205ENST00000428843 PLEKHD1A6NEE1 506 aa35.49■■■■□ 3.27
PTPN18-205ENST00000428843 KCNH8Q96L42 1107 aa35.49■■■■□ 3.27
PTPN18-205ENST00000428843 CDK11AQ9UQ88 783 aaPredicted RBP35.41■■■■□ 3.26
PTPN18-205ENST00000428843 TSPOAP1O95153 1857 aa35.37■■■■□ 3.25
PTPN18-205ENST00000428843 MAP3K4Q9Y6R4 1608 aa35.37■■■■□ 3.25
PTPN18-205ENST00000428843 CFAP43Q8NDM7 1665 aa35.33■■■■□ 3.25
PTPN18-205ENST00000428843 TROQ12816 1431 aaPredicted RBP35.33■■■■□ 3.25
PTPN18-205ENST00000428843 MAGI3Q5TCQ9 1506 aa35.32■■■■□ 3.25
PTPN18-205ENST00000428843 ABCA9Q8IUA7 1624 aa35.32■■■■□ 3.25
PTPN18-205ENST00000428843 PPRC1Q5VV67 1664 aaKnown RBP35.28■■■■□ 3.24
PTPN18-205ENST00000428843 CD109Q6YHK3 1445 aa35.26■■■■□ 3.24
PTPN18-205ENST00000428843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.26■■■■□ 3.23
PTPN18-205ENST00000428843 KIF14Q15058 1648 aa35.24■■■■□ 3.23
PTPN18-205ENST00000428843 TIAM1Q13009 1591 aa35.24■■■■□ 3.23
PTPN18-205ENST00000428843 TTC37Q6PGP7 1564 aa35.21■■■■□ 3.23
PTPN18-205ENST00000428843 MTUS2Q5JR59 1369 aa35.19■■■■□ 3.22
PTPN18-205ENST00000428843 MAP3K1Q13233 1512 aa35.17■■■■□ 3.22
PTPN18-205ENST00000428843 EHBP1L1Q8N3D4 1523 aa35.15■■■■□ 3.22
PTPN18-205ENST00000428843 TEX14Q8IWB6 1497 aa35.15■■■■□ 3.22
PTPN18-205ENST00000428843 APLP2Q06481 763 aa35.09■■■■□ 3.21
PTPN18-205ENST00000428843 MYO5CQ9NQX4 1742 aa35.07■■■■□ 3.2
PTPN18-205ENST00000428843 LRRC9Q6ZRR7 1453 aa35.07■■■■□ 3.2
PTPN18-205ENST00000428843 KANK4Q5T7N3 995 aaPredicted RBP35.03■■■■□ 3.2
PTPN18-205ENST00000428843 PLCH2O75038 1416 aa35.03■■■■□ 3.2
PTPN18-205ENST00000428843 SUPT6HQ7KZ85 1726 aaKnown RBP35■■■■□ 3.19
PTPN18-205ENST00000428843 CDC42BPAQ5VT25 1732 aa34.98■■■■□ 3.19
PTPN18-205ENST00000428843 KDM6BO15054 1643 aa34.97■■■■□ 3.19
PTPN18-205ENST00000428843 FANCAO15360 1455 aa34.97■■■■□ 3.19
PTPN18-205ENST00000428843 ARAP3Q8WWN8 1544 aa34.96■■■■□ 3.19
PTPN18-205ENST00000428843 PREX2Q70Z35 1606 aa34.96■■■■□ 3.19
PTPN18-205ENST00000428843 NEO1Q92859 1461 aa34.96■■■■□ 3.19
PTPN18-205ENST00000428843 CFAP74Q9C0B2 1584 aa34.96■■■■□ 3.19
PTPN18-205ENST00000428843 CDC42BPBQ9Y5S2 1711 aa34.95■■■■□ 3.19
PTPN18-205ENST00000428843 NCOA2Q15596 1464 aa34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 225 ms