RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.27
RHBDF1-204ENST00000428730 DEKP35659 375 aaKnown RBP22.95■■□□□ 1.27
RHBDF1-204ENST00000428730 SETD5Q9C0A6 1442 aa22.94■■□□□ 1.26
RHBDF1-204ENST00000428730 ERICH3Q5RHP9 1530 aa22.94■■□□□ 1.26
RHBDF1-204ENST00000428730 HNRNPUQ00839 825 aaKnown RBP eCLIP22.93■■□□□ 1.26
RHBDF1-204ENST00000428730 UNC13AQ9UPW8 1703 aa22.92■■□□□ 1.26
RHBDF1-204ENST00000428730 TOP2BQ02880 1626 aa22.88■■□□□ 1.25
RHBDF1-204ENST00000428730 ARHGAP35Q9NRY4 1499 aa22.88■■□□□ 1.25
RHBDF1-204ENST00000428730 FAM50AQ14320 339 aaKnown RBP22.87■■□□□ 1.25
RHBDF1-204ENST00000428730 PHLDB1Q86UU1 1377 aa22.81■■□□□ 1.24
RHBDF1-204ENST00000428730 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
RHBDF1-204ENST00000428730 NBR1Q14596 966 aa22.8■■□□□ 1.24
RHBDF1-204ENST00000428730 B4GALNT3Q6L9W6 998 aa22.77■■□□□ 1.24
RHBDF1-204ENST00000428730 MYT1LQ9UL68 1186 aa22.74■■□□□ 1.23
RHBDF1-204ENST00000428730 PPP4R2Q9NY27 417 aa22.74■■□□□ 1.23
RHBDF1-204ENST00000428730 PAK3O75914 559 aaPredicted RBP22.73■■□□□ 1.23
RHBDF1-204ENST00000428730 TIMELESSQ9UNS1 1208 aa22.73■■□□□ 1.23
RHBDF1-204ENST00000428730 ATAD2BQ9ULI0 1458 aa22.72■■□□□ 1.23
RHBDF1-204ENST00000428730 BIVM-ERCC5R4GMW8 1640 aa22.71■■□□□ 1.23
RHBDF1-204ENST00000428730 ANO8Q9HCE9 1232 aaPredicted RBP22.71■■□□□ 1.23
RHBDF1-204ENST00000428730 TIAM1Q13009 1591 aa22.71■■□□□ 1.23
RHBDF1-204ENST00000428730 NOP58Q9Y2X3 529 aaKnown RBP22.68■■□□□ 1.22
RHBDF1-204ENST00000428730 TONSLQ96HA7 1378 aa22.68■■□□□ 1.22
RHBDF1-204ENST00000428730 CCDC184Q52MB2 194 aa22.67■■□□□ 1.22
RHBDF1-204ENST00000428730 LRRC9Q6ZRR7 1453 aa22.67■■□□□ 1.22
RHBDF1-204ENST00000428730 KIF27Q86VH2 1401 aa22.66■■□□□ 1.22
RHBDF1-204ENST00000428730 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
RHBDF1-204ENST00000428730 ATP1B4Q9UN42 357 aaPredicted RBP22.61■■□□□ 1.21
RHBDF1-204ENST00000428730 CUX1P39880 1505 aa22.6■■□□□ 1.21
RHBDF1-204ENST00000428730 ERICH6BQ5W0A0 696 aa22.6■■□□□ 1.21
RHBDF1-204ENST00000428730 P3H3Q8IVL6 736 aa22.56■■□□□ 1.2
RHBDF1-204ENST00000428730 WASHC2AQ641Q2 1341 aa22.56■■□□□ 1.2
RHBDF1-204ENST00000428730 FAM9BQ8IZU0 186 aa22.56■■□□□ 1.2
RHBDF1-204ENST00000428730 SALL2Q9Y467 1007 aaPredicted RBP22.55■■□□□ 1.2
RHBDF1-204ENST00000428730 MAP3K1Q13233 1512 aa22.54■■□□□ 1.2
RHBDF1-204ENST00000428730 HSPA5P11021 654 aaKnown RBP22.5■■□□□ 1.19
RHBDF1-204ENST00000428730 IL27Q8NEV9 243 aa22.48■■□□□ 1.19
RHBDF1-204ENST00000428730 FHAD1B1AJZ9 1412 aa22.46■■□□□ 1.19
RHBDF1-204ENST00000428730 RTN4Q9NQC3 1192 aaKnown RBP22.45■■□□□ 1.19
RHBDF1-204ENST00000428730 CCDC18Q5T9S5 1454 aa22.45■■□□□ 1.18
RHBDF1-204ENST00000428730 CCDC136Q96JN2 1154 aa22.44■■□□□ 1.18
RHBDF1-204ENST00000428730 MRS2Q9HD23 443 aa22.44■■□□□ 1.18
RHBDF1-204ENST00000428730 KDM5BQ9UGL1 1544 aa22.43■■□□□ 1.18
RHBDF1-204ENST00000428730 PCF11O94913 1555 aaKnown RBP22.42■■□□□ 1.18
RHBDF1-204ENST00000428730 RTL5Q5HYW3 569 aaPredicted RBP22.42■■□□□ 1.18
RHBDF1-204ENST00000428730 IGF1RP08069 1367 aa22.42■■□□□ 1.18
RHBDF1-204ENST00000428730 IPO9Q96P70 1041 aaKnown RBP22.41■■□□□ 1.18
RHBDF1-204ENST00000428730 ZBED9Q6R2W3 1325 aa22.41■■□□□ 1.18
RHBDF1-204ENST00000428730 AQRO60306 1485 aaKnown RBP eCLIP22.39■■□□□ 1.182e-7■■■■■ 37.9
RHBDF1-204ENST00000428730 ANP32AP39687 249 aaKnown RBP22.39■■□□□ 1.17
RHBDF1-204ENST00000428730 PRKRIP1Q9H875 184 aaPredicted RBP22.39■■□□□ 1.17
RHBDF1-204ENST00000428730 PTPRKQ15262 1439 aa22.39■■□□□ 1.17
RHBDF1-204ENST00000428730 C11orf95C9JLR9 678 aaPredicted RBP22.38■■□□□ 1.17
RHBDF1-204ENST00000428730 CFAP43Q8NDM7 1665 aa22.38■■□□□ 1.17
RHBDF1-204ENST00000428730 AKNAQ7Z591 1439 aa22.38■■□□□ 1.17
RHBDF1-204ENST00000428730 UACAQ9BZF9 1416 aa22.38■■□□□ 1.17
RHBDF1-204ENST00000428730 CNTLNQ9NXG0 1405 aa22.37■■□□□ 1.17
RHBDF1-204ENST00000428730 SENP3-EIF4A1A0A087X0R7 540 aa22.36■■□□□ 1.17
RHBDF1-204ENST00000428730 ZBTB47Q9UFB7 747 aaPredicted RBP22.36■■□□□ 1.17
RHBDF1-204ENST00000428730 CARMIL1Q5VZK9 1371 aa22.34■■□□□ 1.17
RHBDF1-204ENST00000428730 FHOD3Q2V2M9 1422 aa22.33■■□□□ 1.17
RHBDF1-204ENST00000428730 NCOA2Q15596 1464 aa22.32■■□□□ 1.16
RHBDF1-204ENST00000428730 EIF4G2P78344 907 aaKnown RBP eCLIP22.32■■□□□ 1.16
RHBDF1-204ENST00000428730 CNGB1Q14028 1251 aaPredicted RBP22.31■■□□□ 1.16
RHBDF1-204ENST00000428730 FGD6Q6ZV73 1430 aa22.31■■□□□ 1.16
RHBDF1-204ENST00000428730 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.31■■□□□ 1.16
RHBDF1-204ENST00000428730 HFM1A2PYH4 1435 aa22.3■■□□□ 1.16
RHBDF1-204ENST00000428730 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.29■■□□□ 1.16
RHBDF1-204ENST00000428730 PTPN23Q9H3S7 1636 aa22.29■■□□□ 1.16
RHBDF1-204ENST00000428730 NAIPQ13075 1403 aa22.26■■□□□ 1.15
RHBDF1-204ENST00000428730 NPM2Q86SE8 214 aaKnown RBP22.26■■□□□ 1.15
RHBDF1-204ENST00000428730 CCDC7Q96M83 1385 aa22.25■■□□□ 1.15
RHBDF1-204ENST00000428730 LAS1LQ9Y4W2 734 aaKnown RBP22.25■■□□□ 1.15
RHBDF1-204ENST00000428730 RRP7BPQ9NSQ0 103 aa22.2■■□□□ 1.14
RHBDF1-204ENST00000428730 NCOA1Q15788 1441 aa22.2■■□□□ 1.14
RHBDF1-204ENST00000428730 SMG6Q86US8 1419 aaKnown RBP22.2■■□□□ 1.14
RHBDF1-204ENST00000428730 FYCO1Q9BQS8 1478 aa22.19■■□□□ 1.14
RHBDF1-204ENST00000428730 L3MBTL2Q969R5 705 aa22.18■■□□□ 1.14
RHBDF1-204ENST00000428730 NUDCQ9Y266 331 aa22.18■■□□□ 1.14
RHBDF1-204ENST00000428730 NCAPD3P42695 1498 aa22.18■■□□□ 1.14
RHBDF1-204ENST00000428730 CHIC2Q9UKJ5 165 aa22.17■■□□□ 1.14
RHBDF1-204ENST00000428730 FOXD1Q16676 465 aa22.17■■□□□ 1.14
RHBDF1-204ENST00000428730 NEFMP07197 916 aa22.16■■□□□ 1.14
RHBDF1-204ENST00000428730 FMN1Q68DA7 1419 aa22.16■■□□□ 1.14
RHBDF1-204ENST00000428730 CASKIN1Q8WXD9 1431 aa22.16■■□□□ 1.14
RHBDF1-204ENST00000428730 DENND4BO75064 1496 aaPredicted RBP22.16■■□□□ 1.14
RHBDF1-204ENST00000428730 MTUS2Q5JR59 1369 aa22.15■■□□□ 1.14
RHBDF1-204ENST00000428730 CFTRP13569 1480 aa22.14■■□□□ 1.14
RHBDF1-204ENST00000428730 FGD5Q6ZNL6 1462 aa22.14■■□□□ 1.14
RHBDF1-204ENST00000428730 RNF123Q5XPI4 1314 aa22.14■■□□□ 1.14
RHBDF1-204ENST00000428730 KIF7Q2M1P5 1343 aa22.14■■□□□ 1.13
RHBDF1-204ENST00000428730 NBPF8Q3BBV2 869 aa22.11■■□□□ 1.13
RHBDF1-204ENST00000428730 POLR3GLQ9BT43 218 aa22.06■■□□□ 1.12
RHBDF1-204ENST00000428730 BRPF3Q9ULD4 1205 aa22.05■■□□□ 1.12
RHBDF1-204ENST00000428730 MYOM3Q5VTT5 1437 aa22.04■■□□□ 1.12
RHBDF1-204ENST00000428730 MPHOSPH9Q99550 1183 aa22.03■■□□□ 1.12
RHBDF1-204ENST00000428730 KDM6BO15054 1643 aa22.02■■□□□ 1.12
RHBDF1-204ENST00000428730 PDE4AP27815 886 aa22.01■■□□□ 1.11
RHBDF1-204ENST00000428730 EXOC6Q8TAG9 804 aa22.01■■□□□ 1.11
RHBDF1-204ENST00000428730 WASHC2CQ9Y4E1 1318 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms