RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 NISCHQ9Y2I1 1504 aa31.1■■■□□ 2.57
RHBDF1-204ENST00000428730 HRCP23327 699 aa27.85■■■□□ 2.05
RHBDF1-204ENST00000428730 SHROOM4Q9ULL8 1493 aa27.77■■■□□ 2.04
RHBDF1-204ENST00000428730 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
RHBDF1-204ENST00000428730 PPARGC1BQ86YN6 1023 aaKnown RBP27.45■■□□□ 1.99
RHBDF1-204ENST00000428730 PCGF6Q9BYE7 350 aa27.38■■□□□ 1.97
RHBDF1-204ENST00000428730 MYO15BQ96JP2 1530 aa27.35■■□□□ 1.97
RHBDF1-204ENST00000428730 CHIC1Q5VXU3 224 aa27.09■■□□□ 1.93
RHBDF1-204ENST00000428730 PELP1Q8IZL8 1130 aaKnown RBP26.6■■□□□ 1.85
RHBDF1-204ENST00000428730 DCAF1Q9Y4B6 1507 aa26.57■■□□□ 1.84
RHBDF1-204ENST00000428730 LOC105371045A0A1W2PR82 267 aa26.57■■□□□ 1.84
RHBDF1-204ENST00000428730 ZCCHC6Q5VYS8 1495 aaKnown RBP26.47■■□□□ 1.83
RHBDF1-204ENST00000428730 SCAF1Q9H7N4 1312 aaKnown RBP26.41■■□□□ 1.82
RHBDF1-204ENST00000428730 TRIM26Q12899 539 aaPredicted RBP26.38■■□□□ 1.81
RHBDF1-204ENST00000428730 CCDC180Q9P1Z9 1646 aa26.23■■□□□ 1.79
RHBDF1-204ENST00000428730 DCAF8L2P0C7V8 631 aa26.1■■□□□ 1.77
RHBDF1-204ENST00000428730 ZEB1P37275 1124 aaPredicted RBP26.05■■□□□ 1.76
RHBDF1-204ENST00000428730 NEUROD1Q13562 356 aa25.7■■□□□ 1.7
RHBDF1-204ENST00000428730 ACIN1Q9UKV3 1341 aaKnown RBP25.68■■□□□ 1.7
RHBDF1-204ENST00000428730 FAM9AQ8IZU1 332 aaPredicted RBP25.58■■□□□ 1.69
RHBDF1-204ENST00000428730 EHMT2Q96KQ7 1210 aa25.58■■□□□ 1.69
RHBDF1-204ENST00000428730 GTF3C3Q9Y5Q9 886 aa25.53■■□□□ 1.68
RHBDF1-204ENST00000428730 MYT1Q01538 1121 aa25.46■■□□□ 1.67
RHBDF1-204ENST00000428730 TRIM41Q8WV44 630 aa25.44■■□□□ 1.66
RHBDF1-204ENST00000428730 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.41■■□□□ 1.66
RHBDF1-204ENST00000428730 DIEXFQ68CQ4 756 aaKnown RBP25.28■■□□□ 1.64
RHBDF1-204ENST00000428730 CCER1Q8TC90 406 aaPredicted RBP25.28■■□□□ 1.64
RHBDF1-204ENST00000428730 CENPBP07199 599 aaPredicted RBP25.28■■□□□ 1.64
RHBDF1-204ENST00000428730 ABCC9O60706 1549 aa25.15■■□□□ 1.62
RHBDF1-204ENST00000428730 RSF1Q96T23 1441 aaPredicted RBP25.1■■□□□ 1.61
RHBDF1-204ENST00000428730 RB1CC1Q8TDY2 1594 aa25.05■■□□□ 1.6
RHBDF1-204ENST00000428730 YTHDC1Q96MU7 727 aaKnown RBP24.99■■□□□ 1.59
RHBDF1-204ENST00000428730 TTBK1Q5TCY1 1321 aaPredicted RBP24.96■■□□□ 1.59
RHBDF1-204ENST00000428730 ZNF316A6NFI3 1004 aaPredicted RBP24.76■■□□□ 1.56
RHBDF1-204ENST00000428730 SCRIBQ14160 1630 aa24.74■■□□□ 1.55
RHBDF1-204ENST00000428730 MIER1Q8N108 512 aa24.7■■□□□ 1.54
RHBDF1-204ENST00000428730 CECR2Q9BXF3 1484 aa24.46■■□□□ 1.51
RHBDF1-204ENST00000428730 WRNQ14191 1432 aaPredicted RBP eCLIP24.45■■□□□ 1.5
RHBDF1-204ENST00000428730 CEP162Q5TB80 1403 aa24.41■■□□□ 1.5
RHBDF1-204ENST00000428730 MROH2BQ7Z745 1585 aa24.38■■□□□ 1.49
RHBDF1-204ENST00000428730 HNRNPUL2Q1KMD3 747 aaKnown RBP24.31■■□□□ 1.48
RHBDF1-204ENST00000428730 WIZO95785 1651 aa24.3■■□□□ 1.48
RHBDF1-204ENST00000428730 SUPT16HQ9Y5B9 1047 aaKnown RBP24.29■■□□□ 1.48
RHBDF1-204ENST00000428730 CCDC88BA6NC98 1476 aa24.25■■□□□ 1.47
RHBDF1-204ENST00000428730 EIF4G1Q04637 1599 aaKnown RBP24.22■■□□□ 1.47
RHBDF1-204ENST00000428730 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
RHBDF1-204ENST00000428730 TSHZ2Q9NRE2 1034 aa24.19■■□□□ 1.46
RHBDF1-204ENST00000428730 SOGA1O94964 1423 aa24.18■■□□□ 1.46
RHBDF1-204ENST00000428730 TNIKQ9UKE5 1360 aa24.18■■□□□ 1.46
RHBDF1-204ENST00000428730 UBTFP17480 764 aaKnown RBP24.17■■□□□ 1.46
RHBDF1-204ENST00000428730 ANP32EQ9BTT0 268 aa24.15■■□□□ 1.46
RHBDF1-204ENST00000428730 BCL11AQ9H165 835 aa24.14■■□□□ 1.45
RHBDF1-204ENST00000428730 RUSC2Q8N2Y8 1516 aa24.06■■□□□ 1.44
RHBDF1-204ENST00000428730 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
RHBDF1-204ENST00000428730 CSRNP3Q8WYN3 585 aa24.03■■□□□ 1.44
RHBDF1-204ENST00000428730 CLSPNQ9HAW4 1339 aa24■■□□□ 1.43
RHBDF1-204ENST00000428730 BCANQ96GW7 911 aa23.89■■□□□ 1.41
RHBDF1-204ENST00000428730 GOLGA3Q08378 1498 aa23.88■■□□□ 1.41
RHBDF1-204ENST00000428730 NACADO15069 1562 aa23.86■■□□□ 1.41
RHBDF1-204ENST00000428730 KCNH8Q96L42 1107 aa23.82■■□□□ 1.4
RHBDF1-204ENST00000428730 EEA1Q15075 1411 aa23.81■■□□□ 1.4
RHBDF1-204ENST00000428730 RANGAP1P46060 587 aaPredicted RBP23.77■■□□□ 1.4
RHBDF1-204ENST00000428730 DHX57Q6P158 1386 aaKnown RBP23.75■■□□□ 1.39
RHBDF1-204ENST00000428730 CLIP1P30622 1438 aa23.74■■□□□ 1.39
RHBDF1-204ENST00000428730 TOP2AP11388 1531 aaKnown RBP23.74■■□□□ 1.39
RHBDF1-204ENST00000428730 SMARCA2P51531 1590 aa23.72■■□□□ 1.39
RHBDF1-204ENST00000428730 APLP2Q06481 763 aa23.71■■□□□ 1.39
RHBDF1-204ENST00000428730 VPS8Q8N3P4 1428 aa23.69■■□□□ 1.38
RHBDF1-204ENST00000428730 FKBP8Q14318 412 aa23.67■■□□□ 1.38
RHBDF1-204ENST00000428730 CEP164Q9UPV0 1460 aa23.61■■□□□ 1.37
RHBDF1-204ENST00000428730 RBM19Q9Y4C8 960 aaKnown RBP23.6■■□□□ 1.37
RHBDF1-204ENST00000428730 ITGAEP38570 1179 aa23.52■■□□□ 1.36
RHBDF1-204ENST00000428730 KIF21BO75037 1637 aa23.5■■□□□ 1.35
RHBDF1-204ENST00000428730 RAPGEF2Q9Y4G8 1499 aa23.49■■□□□ 1.35
RHBDF1-204ENST00000428730 SMARCA4P51532 1647 aa23.48■■□□□ 1.35
RHBDF1-204ENST00000428730 MSH5O43196 834 aa23.45■■□□□ 1.34
RHBDF1-204ENST00000428730 KANK4Q5T7N3 995 aaPredicted RBP23.44■■□□□ 1.34
RHBDF1-204ENST00000428730 SYNJ1O43426 1573 aa23.41■■□□□ 1.34
RHBDF1-204ENST00000428730 DDX10Q13206 875 aaKnown RBP23.4■■□□□ 1.34
RHBDF1-204ENST00000428730 NEFLP07196 543 aa23.37■■□□□ 1.33
RHBDF1-204ENST00000428730 TRIM52Q96A61 297 aa23.37■■□□□ 1.33
RHBDF1-204ENST00000428730 BAZ1BQ9UIG0 1483 aaKnown RBP23.35■■□□□ 1.33
RHBDF1-204ENST00000428730 HIRIP3Q9BW71 556 aaPredicted RBP23.25■■□□□ 1.31
RHBDF1-204ENST00000428730 ARAP1Q96P48 1450 aa23.24■■□□□ 1.31
RHBDF1-204ENST00000428730 RRBP1Q9P2E9 1410 aaKnown RBP23.24■■□□□ 1.31
RHBDF1-204ENST00000428730 MAPKBP1O60336 1514 aa23.2■■□□□ 1.3
RHBDF1-204ENST00000428730 CUX2O14529 1486 aa23.19■■□□□ 1.3
RHBDF1-204ENST00000428730 CCNB3Q8WWL7 1395 aa23.18■■□□□ 1.3
RHBDF1-204ENST00000428730 PPP1R15AO75807 674 aaPredicted RBP23.18■■□□□ 1.3
RHBDF1-204ENST00000428730 RAB3GAP2Q9H2M9 1393 aa23.18■■□□□ 1.3
RHBDF1-204ENST00000428730 SIN3AQ96ST3 1273 aa23.17■■□□□ 1.3
RHBDF1-204ENST00000428730 WDR97A6NE52 1622 aa23.16■■□□□ 1.3
RHBDF1-204ENST00000428730 IRX6P78412 446 aaPredicted RBP23.15■■□□□ 1.3
RHBDF1-204ENST00000428730 ERICH6Q7L0X2 663 aa23.12■■□□□ 1.29
RHBDF1-204ENST00000428730 FANCIQ9NVI1 1328 aa23.1■■□□□ 1.29
RHBDF1-204ENST00000428730 ANP32CO43423 234 aa23.07■■□□□ 1.28
RHBDF1-204ENST00000428730 CCER2I3L3R5 266 aa23.05■■□□□ 1.28
RHBDF1-204ENST00000428730 PRKCSHP14314 528 aaPredicted RBP23.03■■□□□ 1.28
RHBDF1-204ENST00000428730 CDK11AQ9UQ88 783 aaPredicted RBP23.02■■□□□ 1.28
RHBDF1-204ENST00000428730 PRXQ9BXM0 1461 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms