RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 SHROOM2Q13796 1616 aa20.79■□□□□ 0.92
TTC3-208ENST00000428693 IGF1RP08069 1367 aa20.76■□□□□ 0.91
TTC3-208ENST00000428693 RUSC2Q8N2Y8 1516 aa20.72■□□□□ 0.91
TTC3-208ENST00000428693 CUL7Q14999 1698 aa20.7■□□□□ 0.9
TTC3-208ENST00000428693 TTBK1Q5TCY1 1321 aaPredicted RBP20.68■□□□□ 0.9
TTC3-208ENST00000428693 CARMIL1Q5VZK9 1371 aa20.67■□□□□ 0.9
TTC3-208ENST00000428693 NPM1P06748 294 aaKnown RBP eCLIP20.65■□□□□ 0.9
TTC3-208ENST00000428693 KIAA0586Q9BVV6 1533 aa20.64■□□□□ 0.9
TTC3-208ENST00000428693 FAM69CQ0P6D2 419 aa20.53■□□□□ 0.88
TTC3-208ENST00000428693 PTPRGP23470 1445 aa20.51■□□□□ 0.87
TTC3-208ENST00000428693 CARMIL2Q6F5E8 1435 aa20.51■□□□□ 0.87
TTC3-208ENST00000428693 ADCY10Q96PN6 1610 aa20.49■□□□□ 0.87
TTC3-208ENST00000428693 KIF13AQ9H1H9 1805 aa20.48■□□□□ 0.87
TTC3-208ENST00000428693 IQGAP2Q13576 1575 aa20.48■□□□□ 0.87
TTC3-208ENST00000428693 RAPGEF2Q9Y4G8 1499 aa20.47■□□□□ 0.87
TTC3-208ENST00000428693 TNIKQ9UKE5 1360 aa20.45■□□□□ 0.86
TTC3-208ENST00000428693 ABCC10Q5T3U5 1492 aa20.42■□□□□ 0.86
TTC3-208ENST00000428693 MAPKBP1O60336 1514 aa20.42■□□□□ 0.86
TTC3-208ENST00000428693 DIP2BQ9P265 1576 aa20.37■□□□□ 0.85
TTC3-208ENST00000428693 TSPOAP1O95153 1857 aa20.35■□□□□ 0.85
TTC3-208ENST00000428693 DISP1Q96F81 1524 aa20.34■□□□□ 0.85
TTC3-208ENST00000428693 ABCC2Q92887 1545 aa20.32■□□□□ 0.84
TTC3-208ENST00000428693 UACAQ9BZF9 1416 aa20.32■□□□□ 0.84
TTC3-208ENST00000428693 UGGT2Q9NYU1 1516 aa20.3■□□□□ 0.84
TTC3-208ENST00000428693 ASXL2Q76L83 1435 aa20.28■□□□□ 0.84
TTC3-208ENST00000428693 CTTNBP2Q8WZ74 1663 aa20.28■□□□□ 0.84
TTC3-208ENST00000428693 KIAA0556O60303 1618 aa20.27■□□□□ 0.84
TTC3-208ENST00000428693 UHRF1BP1LA0JNW5 1464 aa20.25■□□□□ 0.83
TTC3-208ENST00000428693 PLB1Q6P1J6 1458 aa20.24■□□□□ 0.83
TTC3-208ENST00000428693 KDM6BO15054 1643 aa20.22■□□□□ 0.83
TTC3-208ENST00000428693 PRXQ9BXM0 1461 aa20.22■□□□□ 0.83
TTC3-208ENST00000428693 P3H3Q8IVL6 736 aa20.21■□□□□ 0.83
TTC3-208ENST00000428693 CSRNP3Q8WYN3 585 aa20.21■□□□□ 0.83
TTC3-208ENST00000428693 GOLGA3Q08378 1498 aa20.21■□□□□ 0.83
TTC3-208ENST00000428693 FAM9AQ8IZU1 332 aaPredicted RBP20.2■□□□□ 0.82
TTC3-208ENST00000428693 ZCCHC11Q5TAX3 1644 aaKnown RBP20.18■□□□□ 0.82
TTC3-208ENST00000428693 RANGAP1P46060 587 aaPredicted RBP20.18■□□□□ 0.82
TTC3-208ENST00000428693 KDM5BQ9UGL1 1544 aa20.17■□□□□ 0.82
TTC3-208ENST00000428693 ARID3CA6NKF2 412 aa20.15■□□□□ 0.82
TTC3-208ENST00000428693 EPRSP07814 1512 aaKnown RBP20.13■□□□□ 0.81
TTC3-208ENST00000428693 KCNH8Q96L42 1107 aa20.13■□□□□ 0.81
TTC3-208ENST00000428693 GLI2P10070 1586 aa20.12■□□□□ 0.81
TTC3-208ENST00000428693 WDR7Q9Y4E6 1490 aa20.08■□□□□ 0.81
TTC3-208ENST00000428693 PPRC1Q5VV67 1664 aaKnown RBP20.07■□□□□ 0.8
TTC3-208ENST00000428693 EHMT2Q96KQ7 1210 aa20.07■□□□□ 0.8
TTC3-208ENST00000428693 ABCA8O94911 1581 aa20.06■□□□□ 0.8
TTC3-208ENST00000428693 EEA1Q15075 1411 aa20.05■□□□□ 0.8
TTC3-208ENST00000428693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.04■□□□□ 0.8
TTC3-208ENST00000428693 HNRNPUL2Q1KMD3 747 aaKnown RBP20.04■□□□□ 0.8
TTC3-208ENST00000428693 TEX14Q8IWB6 1497 aa20.04■□□□□ 0.8
TTC3-208ENST00000428693 MAP3K4Q9Y6R4 1608 aa20.03■□□□□ 0.8
TTC3-208ENST00000428693 CD109Q6YHK3 1445 aa19.99■□□□□ 0.79
TTC3-208ENST00000428693 KDM4FA0A1W2PPD8 638 aa19.98■□□□□ 0.79
TTC3-208ENST00000428693 COL17A1Q9UMD9 1497 aaPredicted RBP19.96■□□□□ 0.79
TTC3-208ENST00000428693 SAMD9Q5K651 1589 aa19.95■□□□□ 0.78
TTC3-208ENST00000428693 FHOD3Q2V2M9 1422 aa19.93■□□□□ 0.78
TTC3-208ENST00000428693 ATP10BO94823 1461 aa19.93■□□□□ 0.78
TTC3-208ENST00000428693 UBTFP17480 764 aaKnown RBP19.93■□□□□ 0.78
TTC3-208ENST00000428693 CFAP43Q8NDM7 1665 aa19.92■□□□□ 0.78
TTC3-208ENST00000428693 RAPGEF6Q8TEU7 1601 aa19.91■□□□□ 0.78
TTC3-208ENST00000428693 MAGI3Q5TCQ9 1506 aa19.88■□□□□ 0.77
TTC3-208ENST00000428693 KIF21BO75037 1637 aa19.87■□□□□ 0.77
TTC3-208ENST00000428693 ATP1B4Q9UN42 357 aaPredicted RBP19.85■□□□□ 0.77
TTC3-208ENST00000428693 ADGRL1O94910 1474 aa19.85■□□□□ 0.77
TTC3-208ENST00000428693 NUP153P49790 1475 aaKnown RBP19.82■□□□□ 0.76
TTC3-208ENST00000428693 PLEKHD1A6NEE1 506 aa19.82■□□□□ 0.76
TTC3-208ENST00000428693 EFCAB5A4FU69 1503 aa19.8■□□□□ 0.76
TTC3-208ENST00000428693 ABCA9Q8IUA7 1624 aa19.77■□□□□ 0.76
TTC3-208ENST00000428693 RAPGEF3O95398 923 aa19.74■□□□□ 0.75
TTC3-208ENST00000428693 ARAP3Q8WWN8 1544 aa19.72■□□□□ 0.75
TTC3-208ENST00000428693 PHLDB1Q86UU1 1377 aa19.7■□□□□ 0.74
TTC3-208ENST00000428693 CDK13Q14004 1512 aaKnown RBP19.7■□□□□ 0.74
TTC3-208ENST00000428693 NEO1Q92859 1461 aa19.68■□□□□ 0.74
TTC3-208ENST00000428693 ARID4BQ4LE39 1312 aaPredicted RBP19.67■□□□□ 0.74
TTC3-208ENST00000428693 FMN1Q68DA7 1419 aa19.67■□□□□ 0.74
TTC3-208ENST00000428693 ARHGAP35Q9NRY4 1499 aa19.66■□□□□ 0.74
TTC3-208ENST00000428693 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.63■□□□□ 0.73
TTC3-208ENST00000428693 CDK11AQ9UQ88 783 aaPredicted RBP19.63■□□□□ 0.73
TTC3-208ENST00000428693 HECW1Q76N89 1606 aa19.62■□□□□ 0.73
TTC3-208ENST00000428693 FANCAO15360 1455 aa19.62■□□□□ 0.73
TTC3-208ENST00000428693 AKNAQ7Z591 1439 aa19.61■□□□□ 0.73
TTC3-208ENST00000428693 TTC37Q6PGP7 1564 aa19.61■□□□□ 0.73
TTC3-208ENST00000428693 DENND4BO75064 1496 aaPredicted RBP19.6■□□□□ 0.73
TTC3-208ENST00000428693 CFAP74Q9C0B2 1584 aa19.57■□□□□ 0.72
TTC3-208ENST00000428693 FRMPD1Q5SYB0 1578 aa19.56■□□□□ 0.72
TTC3-208ENST00000428693 HECW2Q9P2P5 1572 aa19.53■□□□□ 0.72
TTC3-208ENST00000428693 PLPPR3Q6T4P5 718 aa19.52■□□□□ 0.72
TTC3-208ENST00000428693 PLCH2O75038 1416 aa19.51■□□□□ 0.71
TTC3-208ENST00000428693 CLIP1P30622 1438 aa19.51■□□□□ 0.71
TTC3-208ENST00000428693 EFCAB2Q5VUJ9 269 aa19.51■□□□□ 0.71
TTC3-208ENST00000428693 MYT1LQ9UL68 1186 aa19.51■□□□□ 0.71
TTC3-208ENST00000428693 RICTORQ6R327 1708 aa19.51■□□□□ 0.71
TTC3-208ENST00000428693 SCAPERQ9BY12 1400 aa19.51■□□□□ 0.71
TTC3-208ENST00000428693 KIF14Q15058 1648 aa19.49■□□□□ 0.71
TTC3-208ENST00000428693 MYO5CQ9NQX4 1742 aa19.48■□□□□ 0.71
TTC3-208ENST00000428693 MLECQ14165 292 aa19.48■□□□□ 0.71
TTC3-208ENST00000428693 TROQ12816 1431 aaPredicted RBP19.48■□□□□ 0.71
TTC3-208ENST00000428693 ARHGEF40Q8TER5 1519 aa19.47■□□□□ 0.71
TTC3-208ENST00000428693 PTPRMP28827 1452 aa19.46■□□□□ 0.71
TTC3-208ENST00000428693 ADAMTSL3P82987 1691 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms