RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 RUSC2Q8N2Y8 1516 aa32.51■■■□□ 2.79
UPK3BP1-201ENST00000428678 NPM1P06748 294 aaKnown RBP eCLIP32.37■■■□□ 2.77
UPK3BP1-201ENST00000428678 FAM69CQ0P6D2 419 aa32.33■■■□□ 2.77
UPK3BP1-201ENST00000428678 ABCC10Q5T3U5 1492 aa32.31■■■□□ 2.76
UPK3BP1-201ENST00000428678 ADCY10Q96PN6 1610 aa32.3■■■□□ 2.76
UPK3BP1-201ENST00000428678 MAPKBP1O60336 1514 aa32.29■■■□□ 2.76
UPK3BP1-201ENST00000428678 KIAA0586Q9BVV6 1533 aa32.29■■■□□ 2.76
UPK3BP1-201ENST00000428678 IGF1RP08069 1367 aa32.28■■■□□ 2.76
UPK3BP1-201ENST00000428678 KIF27Q86VH2 1401 aa32.27■■■□□ 2.76
UPK3BP1-201ENST00000428678 CUL7Q14999 1698 aa32.26■■■□□ 2.75
UPK3BP1-201ENST00000428678 DIP2BQ9P265 1576 aa32.24■■■□□ 2.75
UPK3BP1-201ENST00000428678 CARMIL1Q5VZK9 1371 aa32.08■■■□□ 2.73
UPK3BP1-201ENST00000428678 TSPOAP1O95153 1857 aa32.08■■■□□ 2.73
UPK3BP1-201ENST00000428678 TTBK1Q5TCY1 1321 aaPredicted RBP32.08■■■□□ 2.73
UPK3BP1-201ENST00000428678 PTPRGP23470 1445 aa32.08■■■□□ 2.73
UPK3BP1-201ENST00000428678 KDM6BO15054 1643 aa32.06■■■□□ 2.72
UPK3BP1-201ENST00000428678 CARMIL2Q6F5E8 1435 aa32■■■□□ 2.71
UPK3BP1-201ENST00000428678 TNIKQ9UKE5 1360 aa31.98■■■□□ 2.71
UPK3BP1-201ENST00000428678 IQGAP2Q13576 1575 aa31.96■■■□□ 2.71
UPK3BP1-201ENST00000428678 ABCC2Q92887 1545 aa31.94■■■□□ 2.7
UPK3BP1-201ENST00000428678 ASXL2Q76L83 1435 aa31.87■■■□□ 2.69
UPK3BP1-201ENST00000428678 PLB1Q6P1J6 1458 aa31.85■■■□□ 2.69
UPK3BP1-201ENST00000428678 KDM4FA0A1W2PPD8 638 aa31.85■■■□□ 2.69
UPK3BP1-201ENST00000428678 UHRF1BP1LA0JNW5 1464 aa31.83■■■□□ 2.69
UPK3BP1-201ENST00000428678 DISP1Q96F81 1524 aa31.81■■■□□ 2.68
UPK3BP1-201ENST00000428678 UACAQ9BZF9 1416 aa31.81■■■□□ 2.68
UPK3BP1-201ENST00000428678 GLI2P10070 1586 aa31.79■■■□□ 2.68
UPK3BP1-201ENST00000428678 PPRC1Q5VV67 1664 aaKnown RBP31.76■■■□□ 2.68
UPK3BP1-201ENST00000428678 RAPGEF2Q9Y4G8 1499 aa31.75■■■□□ 2.67
UPK3BP1-201ENST00000428678 UGGT2Q9NYU1 1516 aa31.72■■■□□ 2.67
UPK3BP1-201ENST00000428678 KDM5BQ9UGL1 1544 aa31.69■■■□□ 2.66
UPK3BP1-201ENST00000428678 EPRSP07814 1512 aaKnown RBP31.67■■■□□ 2.66
UPK3BP1-201ENST00000428678 KIAA0556O60303 1618 aa31.67■■■□□ 2.66
UPK3BP1-201ENST00000428678 ZCCHC11Q5TAX3 1644 aaKnown RBP31.65■■■□□ 2.66
UPK3BP1-201ENST00000428678 MAP3K4Q9Y6R4 1608 aa31.62■■■□□ 2.65
UPK3BP1-201ENST00000428678 TEX14Q8IWB6 1497 aa31.58■■■□□ 2.65
UPK3BP1-201ENST00000428678 COL17A1Q9UMD9 1497 aaPredicted RBP31.57■■■□□ 2.64
UPK3BP1-201ENST00000428678 ADGRL1O94910 1474 aa31.55■■■□□ 2.64
UPK3BP1-201ENST00000428678 CTTNBP2Q8WZ74 1663 aa31.53■■■□□ 2.64
UPK3BP1-201ENST00000428678 WDR7Q9Y4E6 1490 aa31.51■■■□□ 2.63
UPK3BP1-201ENST00000428678 GOLGA3Q08378 1498 aa31.46■■■□□ 2.63
UPK3BP1-201ENST00000428678 ABCA8O94911 1581 aa31.39■■■□□ 2.61
UPK3BP1-201ENST00000428678 KCNH8Q96L42 1107 aa31.37■■■□□ 2.61
UPK3BP1-201ENST00000428678 CD109Q6YHK3 1445 aa31.35■■■□□ 2.61
UPK3BP1-201ENST00000428678 CFAP43Q8NDM7 1665 aa31.35■■■□□ 2.61
UPK3BP1-201ENST00000428678 PRXQ9BXM0 1461 aa31.33■■■□□ 2.61
UPK3BP1-201ENST00000428678 MAGI3Q5TCQ9 1506 aa31.32■■■□□ 2.6
UPK3BP1-201ENST00000428678 ILDR1Q86SU0 546 aaPredicted RBP31.23■■■□□ 2.59
UPK3BP1-201ENST00000428678 HECW2Q9P2P5 1572 aa31.22■■■□□ 2.59
UPK3BP1-201ENST00000428678 ARID3CA6NKF2 412 aa31.21■■■□□ 2.59
UPK3BP1-201ENST00000428678 FAM9AQ8IZU1 332 aaPredicted RBP31.21■■■□□ 2.59
UPK3BP1-201ENST00000428678 P3H3Q8IVL6 736 aa31.19■■■□□ 2.58
UPK3BP1-201ENST00000428678 ATP10BO94823 1461 aa31.13■■■□□ 2.57
UPK3BP1-201ENST00000428678 KIF21BO75037 1637 aa31.11■■■□□ 2.57
UPK3BP1-201ENST00000428678 ARAP3Q8WWN8 1544 aa31.08■■■□□ 2.57
UPK3BP1-201ENST00000428678 ABCA9Q8IUA7 1624 aa31.04■■■□□ 2.56
UPK3BP1-201ENST00000428678 SAMD9Q5K651 1589 aa31.04■■■□□ 2.56
UPK3BP1-201ENST00000428678 CSRNP3Q8WYN3 585 aa31.02■■■□□ 2.56
UPK3BP1-201ENST00000428678 RAPGEF6Q8TEU7 1601 aa31.01■■■□□ 2.55
UPK3BP1-201ENST00000428678 PHLDB1Q86UU1 1377 aa30.98■■■□□ 2.55
UPK3BP1-201ENST00000428678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.98■■■□□ 2.55
UPK3BP1-201ENST00000428678 HNRNPUL2Q1KMD3 747 aaKnown RBP30.98■■■□□ 2.55
UPK3BP1-201ENST00000428678 RAPGEF3O95398 923 aa30.92■■■□□ 2.54
UPK3BP1-201ENST00000428678 NEO1Q92859 1461 aa30.91■■■□□ 2.54
UPK3BP1-201ENST00000428678 RANGAP1P46060 587 aaPredicted RBP30.91■■■□□ 2.54
UPK3BP1-201ENST00000428678 NUP153P49790 1475 aaKnown RBP30.88■■■□□ 2.53
UPK3BP1-201ENST00000428678 FHOD3Q2V2M9 1422 aa30.85■■■□□ 2.53
UPK3BP1-201ENST00000428678 ADAMTSL3P82987 1691 aa30.84■■■□□ 2.53
UPK3BP1-201ENST00000428678 FRMPD1Q5SYB0 1578 aa30.83■■■□□ 2.53
UPK3BP1-201ENST00000428678 PTPRMP28827 1452 aa30.82■■■□□ 2.53
UPK3BP1-201ENST00000428678 EEA1Q15075 1411 aa30.81■■■□□ 2.52
UPK3BP1-201ENST00000428678 ARID4BQ4LE39 1312 aaPredicted RBP30.79■■■□□ 2.52
UPK3BP1-201ENST00000428678 BCORL1Q5H9F3 1711 aa30.76■■■□□ 2.52
UPK3BP1-201ENST00000428678 PLEKHD1A6NEE1 506 aa30.76■■■□□ 2.51
UPK3BP1-201ENST00000428678 MADDQ8WXG6 1647 aa30.73■■■□□ 2.51
UPK3BP1-201ENST00000428678 DENND4BO75064 1496 aaPredicted RBP30.71■■■□□ 2.51
UPK3BP1-201ENST00000428678 ARHGEF40Q8TER5 1519 aa30.7■■■□□ 2.51
UPK3BP1-201ENST00000428678 RICTORQ6R327 1708 aa30.68■■■□□ 2.5
UPK3BP1-201ENST00000428678 AKNAQ7Z591 1439 aa30.68■■■□□ 2.5
UPK3BP1-201ENST00000428678 FANCAO15360 1455 aa30.68■■■□□ 2.5
UPK3BP1-201ENST00000428678 EFCAB5A4FU69 1503 aa30.68■■■□□ 2.5
UPK3BP1-201ENST00000428678 CFAP74Q9C0B2 1584 aa30.67■■■□□ 2.5
UPK3BP1-201ENST00000428678 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.66■■■□□ 2.5
UPK3BP1-201ENST00000428678 TTC37Q6PGP7 1564 aa30.63■■■□□ 2.49
UPK3BP1-201ENST00000428678 PCF11O94913 1555 aaKnown RBP30.62■■■□□ 2.49
UPK3BP1-201ENST00000428678 RIMS1Q86UR5 1692 aaKnown RBP30.62■■■□□ 2.49
UPK3BP1-201ENST00000428678 FBXO41Q8TF61 875 aa30.59■■■□□ 2.49
UPK3BP1-201ENST00000428678 CDK13Q14004 1512 aaKnown RBP30.58■■■□□ 2.49
UPK3BP1-201ENST00000428678 LMTK3Q96Q04 1460 aa30.57■■■□□ 2.48
UPK3BP1-201ENST00000428678 ZMYM4Q5VZL5 1548 aa30.56■■■□□ 2.48
UPK3BP1-201ENST00000428678 ZFYVE16Q7Z3T8 1539 aa30.54■■■□□ 2.48
UPK3BP1-201ENST00000428678 POGZQ7Z3K3 1410 aa30.54■■■□□ 2.48
UPK3BP1-201ENST00000428678 YEATS2Q9ULM3 1422 aa30.52■■■□□ 2.48
UPK3BP1-201ENST00000428678 PLPPR3Q6T4P5 718 aa30.51■■■□□ 2.47
UPK3BP1-201ENST00000428678 EHMT2Q96KQ7 1210 aa30.49■■■□□ 2.47
UPK3BP1-201ENST00000428678 MAGI2Q86UL8 1455 aa30.48■■■□□ 2.47
UPK3BP1-201ENST00000428678 SIGLEC1Q9BZZ2 1709 aa30.47■■■□□ 2.47
UPK3BP1-201ENST00000428678 ATP1B4Q9UN42 357 aaPredicted RBP30.47■■■□□ 2.47
UPK3BP1-201ENST00000428678 HECW1Q76N89 1606 aa30.47■■■□□ 2.47
UPK3BP1-201ENST00000428678 PLCH2O75038 1416 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms