RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 PRG4Q92954 1404 aaPredicted RBP25.98■■□□□ 1.75
PHF1-204ENST00000427826 CARMIL1Q5VZK9 1371 aa25.97■■□□□ 1.75
PHF1-204ENST00000427826 RUSC2Q8N2Y8 1516 aa25.93■■□□□ 1.74
PHF1-204ENST00000427826 KIAA0586Q9BVV6 1533 aa25.93■■□□□ 1.74
PHF1-204ENST00000427826 RAPGEF2Q9Y4G8 1499 aa25.75■■□□□ 1.71
PHF1-204ENST00000427826 NPM1P06748 294 aaKnown RBP eCLIP25.71■■□□□ 1.71
PHF1-204ENST00000427826 CARMIL2Q6F5E8 1435 aa25.71■■□□□ 1.71
PHF1-204ENST00000427826 IQGAP2Q13576 1575 aa25.68■■□□□ 1.7
PHF1-204ENST00000427826 PTPRGP23470 1445 aa25.64■■□□□ 1.7
PHF1-204ENST00000427826 TNIKQ9UKE5 1360 aa25.63■■□□□ 1.69
PHF1-204ENST00000427826 ADCY10Q96PN6 1610 aa25.56■■□□□ 1.68
PHF1-204ENST00000427826 TTBK1Q5TCY1 1321 aaPredicted RBP25.56■■□□□ 1.68
PHF1-204ENST00000427826 PRXQ9BXM0 1461 aa25.55■■□□□ 1.68
PHF1-204ENST00000427826 UGGT2Q9NYU1 1516 aa25.54■■□□□ 1.68
PHF1-204ENST00000427826 MAPKBP1O60336 1514 aa25.53■■□□□ 1.68
PHF1-204ENST00000427826 DISP1Q96F81 1524 aa25.53■■□□□ 1.68
PHF1-204ENST00000427826 CSRNP3Q8WYN3 585 aa25.5■■□□□ 1.67
PHF1-204ENST00000427826 FAM69CQ0P6D2 419 aa25.49■■□□□ 1.67
PHF1-204ENST00000427826 ABCC10Q5T3U5 1492 aa25.47■■□□□ 1.67
PHF1-204ENST00000427826 EEA1Q15075 1411 aa25.45■■□□□ 1.66
PHF1-204ENST00000427826 UACAQ9BZF9 1416 aa25.45■■□□□ 1.66
PHF1-204ENST00000427826 UHRF1BP1LA0JNW5 1464 aa25.44■■□□□ 1.66
PHF1-204ENST00000427826 ABCC2Q92887 1545 aa25.43■■□□□ 1.66
PHF1-204ENST00000427826 GOLGA3Q08378 1498 aa25.42■■□□□ 1.66
PHF1-204ENST00000427826 CTTNBP2Q8WZ74 1663 aa25.42■■□□□ 1.66
PHF1-204ENST00000427826 KIAA0556O60303 1618 aa25.41■■□□□ 1.66
PHF1-204ENST00000427826 KIF13AQ9H1H9 1805 aa25.41■■□□□ 1.66
PHF1-204ENST00000427826 DIP2BQ9P265 1576 aa25.36■■□□□ 1.65
PHF1-204ENST00000427826 FAM9AQ8IZU1 332 aaPredicted RBP25.34■■□□□ 1.65
PHF1-204ENST00000427826 PLB1Q6P1J6 1458 aa25.34■■□□□ 1.65
PHF1-204ENST00000427826 ASXL2Q76L83 1435 aa25.31■■□□□ 1.64
PHF1-204ENST00000427826 KDM5BQ9UGL1 1544 aa25.3■■□□□ 1.64
PHF1-204ENST00000427826 CHIC1Q5VXU3 224 aa25.27■■□□□ 1.64
PHF1-204ENST00000427826 GLI2P10070 1586 aa25.19■■□□□ 1.62
PHF1-204ENST00000427826 P3H3Q8IVL6 736 aa25.19■■□□□ 1.62
PHF1-204ENST00000427826 ZCCHC11Q5TAX3 1644 aaKnown RBP25.18■■□□□ 1.62
PHF1-204ENST00000427826 ABCA8O94911 1581 aa25.18■■□□□ 1.62
PHF1-204ENST00000427826 EPRSP07814 1512 aaKnown RBP25.15■■□□□ 1.62
PHF1-204ENST00000427826 KIF21BO75037 1637 aa25.12■■□□□ 1.61
PHF1-204ENST00000427826 WDR7Q9Y4E6 1490 aa25.12■■□□□ 1.61
PHF1-204ENST00000427826 SAMD9Q5K651 1589 aa25.12■■□□□ 1.61
PHF1-204ENST00000427826 TSPOAP1O95153 1857 aa25.11■■□□□ 1.61
PHF1-204ENST00000427826 RANGAP1P46060 587 aaPredicted RBP25.08■■□□□ 1.61
PHF1-204ENST00000427826 KDM6BO15054 1643 aa25.08■■□□□ 1.6
PHF1-204ENST00000427826 AEBP2Q6ZN18 517 aaPredicted RBP25.06■■□□□ 1.6
PHF1-204ENST00000427826 KCNH8Q96L42 1107 aa25.04■■□□□ 1.6
PHF1-204ENST00000427826 UBTFP17480 764 aaKnown RBP25.03■■□□□ 1.6
PHF1-204ENST00000427826 TEX14Q8IWB6 1497 aa25.02■■□□□ 1.6
PHF1-204ENST00000427826 MAP3K4Q9Y6R4 1608 aa25.01■■□□□ 1.59
PHF1-204ENST00000427826 ATP10BO94823 1461 aa25■■□□□ 1.59
PHF1-204ENST00000427826 ARID3CA6NKF2 412 aa24.99■■□□□ 1.59
PHF1-204ENST00000427826 PPRC1Q5VV67 1664 aaKnown RBP24.98■■□□□ 1.59
PHF1-204ENST00000427826 EFCAB5A4FU69 1503 aa24.98■■□□□ 1.59
PHF1-204ENST00000427826 FHOD3Q2V2M9 1422 aa24.98■■□□□ 1.59
PHF1-204ENST00000427826 RAPGEF6Q8TEU7 1601 aa24.96■■□□□ 1.59
PHF1-204ENST00000427826 CD109Q6YHK3 1445 aa24.95■■□□□ 1.59
PHF1-204ENST00000427826 EHMT2Q96KQ7 1210 aa24.95■■□□□ 1.58
PHF1-204ENST00000427826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.94■■□□□ 1.58
PHF1-204ENST00000427826 HNRNPUL2Q1KMD3 747 aaKnown RBP24.94■■□□□ 1.58
PHF1-204ENST00000427826 MAGI3Q5TCQ9 1506 aa24.91■■□□□ 1.58
PHF1-204ENST00000427826 CFAP43Q8NDM7 1665 aa24.9■■□□□ 1.58
PHF1-204ENST00000427826 NUP153P49790 1475 aaKnown RBP24.89■■□□□ 1.57
PHF1-204ENST00000427826 COL17A1Q9UMD9 1497 aaPredicted RBP24.86■■□□□ 1.57
PHF1-204ENST00000427826 PLEKHD1A6NEE1 506 aa24.84■■□□□ 1.57
PHF1-204ENST00000427826 FMN1Q68DA7 1419 aa24.8■■□□□ 1.56
PHF1-204ENST00000427826 PHLDB1Q86UU1 1377 aa24.78■■□□□ 1.56
PHF1-204ENST00000427826 ARHGAP35Q9NRY4 1499 aa24.77■■□□□ 1.56
PHF1-204ENST00000427826 ABCA9Q8IUA7 1624 aa24.77■■□□□ 1.56
PHF1-204ENST00000427826 KDM4FA0A1W2PPD8 638 aa24.73■■□□□ 1.55
PHF1-204ENST00000427826 ATP1B4Q9UN42 357 aaPredicted RBP24.72■■□□□ 1.55
PHF1-204ENST00000427826 ARAP3Q8WWN8 1544 aa24.71■■□□□ 1.55
PHF1-204ENST00000427826 CDK11AQ9UQ88 783 aaPredicted RBP24.69■■□□□ 1.54
PHF1-204ENST00000427826 NEO1Q92859 1461 aa24.68■■□□□ 1.54
PHF1-204ENST00000427826 HECW1Q76N89 1606 aa24.66■■□□□ 1.54
PHF1-204ENST00000427826 CDK13Q14004 1512 aaKnown RBP24.65■■□□□ 1.54
PHF1-204ENST00000427826 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.6■■□□□ 1.53
PHF1-204ENST00000427826 ADGRL1O94910 1474 aa24.58■■□□□ 1.53
PHF1-204ENST00000427826 RAPGEF3O95398 923 aa24.57■■□□□ 1.52
PHF1-204ENST00000427826 CLIP1P30622 1438 aa24.54■■□□□ 1.52
PHF1-204ENST00000427826 AKNAQ7Z591 1439 aa24.54■■□□□ 1.52
PHF1-204ENST00000427826 CASKIN1Q8WXD9 1431 aa24.54■■□□□ 1.52
PHF1-204ENST00000427826 FANCAO15360 1455 aa24.54■■□□□ 1.52
PHF1-204ENST00000427826 TTC37Q6PGP7 1564 aa24.52■■□□□ 1.52
PHF1-204ENST00000427826 CFAP74Q9C0B2 1584 aa24.52■■□□□ 1.52
PHF1-204ENST00000427826 PLCH2O75038 1416 aa24.51■■□□□ 1.51
PHF1-204ENST00000427826 TROQ12816 1431 aaPredicted RBP24.51■■□□□ 1.51
PHF1-204ENST00000427826 DENND4BO75064 1496 aaPredicted RBP24.51■■□□□ 1.51
PHF1-204ENST00000427826 CCDC18Q5T9S5 1454 aa24.49■■□□□ 1.51
PHF1-204ENST00000427826 EFCAB2Q5VUJ9 269 aa24.47■■□□□ 1.51
PHF1-204ENST00000427826 FYCO1Q9BQS8 1478 aa24.45■■□□□ 1.5
PHF1-204ENST00000427826 KIF14Q15058 1648 aa24.44■■□□□ 1.5
PHF1-204ENST00000427826 PCF11O94913 1555 aaKnown RBP24.44■■□□□ 1.5
PHF1-204ENST00000427826 FRMPD1Q5SYB0 1578 aa24.42■■□□□ 1.5
PHF1-204ENST00000427826 SCAPERQ9BY12 1400 aa24.4■■□□□ 1.5
PHF1-204ENST00000427826 LRRIQ1Q96JM4 1722 aa24.38■■□□□ 1.49
PHF1-204ENST00000427826 RICTORQ6R327 1708 aa24.37■■□□□ 1.49
PHF1-204ENST00000427826 MYO5CQ9NQX4 1742 aa24.37■■□□□ 1.49
PHF1-204ENST00000427826 MAGI2Q86UL8 1455 aa24.36■■□□□ 1.49
PHF1-204ENST00000427826 ARID4BQ4LE39 1312 aaPredicted RBP24.35■■□□□ 1.49
PHF1-204ENST00000427826 ARHGAP5Q13017 1502 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms