RNA–Protein interactions for RNA: ENST00000425630.1

LINC00200-201, long intergenic non-protein coding RNA 200, humanhuman

TSL 1 (best) BASIC

Gene LINC00200, Length 2,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00200-201ENST00000425630 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
LINC00200-201ENST00000425630 FAM50AQ14320 339 aaKnown RBP24.23■■□□□ 1.47
LINC00200-201ENST00000425630 BCANQ96GW7 911 aa24.23■■□□□ 1.47
LINC00200-201ENST00000425630 LRRC9Q6ZRR7 1453 aa24.22■■□□□ 1.47
LINC00200-201ENST00000425630 MAP3K1Q13233 1512 aa24.2■■□□□ 1.46
LINC00200-201ENST00000425630 CARMIL1Q5VZK9 1371 aa24.19■■□□□ 1.46
LINC00200-201ENST00000425630 HIRIP3Q9BW71 556 aaPredicted RBP24.18■■□□□ 1.46
LINC00200-201ENST00000425630 P3H3Q8IVL6 736 aa24.17■■□□□ 1.46
LINC00200-201ENST00000425630 PPP1R15AO75807 674 aaPredicted RBP24.15■■□□□ 1.46
LINC00200-201ENST00000425630 FKBP8Q14318 412 aa24.15■■□□□ 1.46
LINC00200-201ENST00000425630 ATP1B4Q9UN42 357 aaPredicted RBP24.12■■□□□ 1.45
LINC00200-201ENST00000425630 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
LINC00200-201ENST00000425630 ANP32EQ9BTT0 268 aa24.05■■□□□ 1.44
LINC00200-201ENST00000425630 FHAD1B1AJZ9 1412 aa24.05■■□□□ 1.44
LINC00200-201ENST00000425630 PCF11O94913 1555 aaKnown RBP24.04■■□□□ 1.44
LINC00200-201ENST00000425630 TRIM52Q96A61 297 aa24.03■■□□□ 1.44
LINC00200-201ENST00000425630 TIMELESSQ9UNS1 1208 aa24.01■■□□□ 1.43
LINC00200-201ENST00000425630 FHOD3Q2V2M9 1422 aa24■■□□□ 1.43
LINC00200-201ENST00000425630 CADPSQ9ULU8 1353 aa24■■□□□ 1.43
LINC00200-201ENST00000425630 CFAP43Q8NDM7 1665 aa23.99■■□□□ 1.43
LINC00200-201ENST00000425630 PRDM2Q13029 1718 aa23.96■■□□□ 1.43
LINC00200-201ENST00000425630 ANP32CO43423 234 aa23.96■■□□□ 1.43
LINC00200-201ENST00000425630 CCER2I3L3R5 266 aa23.95■■□□□ 1.43
LINC00200-201ENST00000425630 NEFLP07196 543 aa23.9■■□□□ 1.42
LINC00200-201ENST00000425630 FYCO1Q9BQS8 1478 aa23.87■■□□□ 1.41
LINC00200-201ENST00000425630 CASKIN1Q8WXD9 1431 aa23.86■■□□□ 1.41
LINC00200-201ENST00000425630 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.86■■□□□ 1.41
LINC00200-201ENST00000425630 TONSLQ96HA7 1378 aa23.86■■□□□ 1.41
LINC00200-201ENST00000425630 RBM19Q9Y4C8 960 aaKnown RBP23.86■■□□□ 1.41
LINC00200-201ENST00000425630 RAD54L2Q9Y4B4 1467 aa23.85■■□□□ 1.41
LINC00200-201ENST00000425630 PTPRKQ15262 1439 aa23.84■■□□□ 1.41
LINC00200-201ENST00000425630 FGD6Q6ZV73 1430 aa23.83■■□□□ 1.41
LINC00200-201ENST00000425630 CCDC18Q5T9S5 1454 aa23.81■■□□□ 1.4
LINC00200-201ENST00000425630 AQRO60306 1485 aaKnown RBP eCLIP23.78■■□□□ 1.4
LINC00200-201ENST00000425630 FANCD2Q9BXW9 1451 aa23.78■■□□□ 1.4
LINC00200-201ENST00000425630 EFCAB5A4FU69 1503 aa23.77■■□□□ 1.4
LINC00200-201ENST00000425630 UACAQ9BZF9 1416 aa23.75■■□□□ 1.39
LINC00200-201ENST00000425630 HFM1A2PYH4 1435 aa23.75■■□□□ 1.39
LINC00200-201ENST00000425630 MTUS2Q5JR59 1369 aa23.74■■□□□ 1.39
LINC00200-201ENST00000425630 ABCA10Q8WWZ4 1543 aa23.73■■□□□ 1.39
LINC00200-201ENST00000425630 POLA1P09884 1462 aaPredicted RBP23.71■■□□□ 1.39
LINC00200-201ENST00000425630 SNAPC4Q5SXM2 1469 aa23.71■■□□□ 1.39
LINC00200-201ENST00000425630 PTPN23Q9H3S7 1636 aa23.7■■□□□ 1.39
LINC00200-201ENST00000425630 NAIPQ13075 1403 aa23.7■■□□□ 1.38
LINC00200-201ENST00000425630 FMN1Q68DA7 1419 aa23.7■■□□□ 1.38
LINC00200-201ENST00000425630 HNRNPUQ00839 825 aaKnown RBP eCLIP23.68■■□□□ 1.38
LINC00200-201ENST00000425630 KDM5BQ9UGL1 1544 aa23.68■■□□□ 1.38
LINC00200-201ENST00000425630 IRX6P78412 446 aaPredicted RBP23.67■■□□□ 1.38
LINC00200-201ENST00000425630 DNMBPQ6XZF7 1577 aa23.66■■□□□ 1.38
LINC00200-201ENST00000425630 TOPBP1Q92547 1522 aa23.66■■□□□ 1.38
LINC00200-201ENST00000425630 NCOA2Q15596 1464 aa23.64■■□□□ 1.37
LINC00200-201ENST00000425630 CTTNBP2Q8WZ74 1663 aa23.63■■□□□ 1.37
LINC00200-201ENST00000425630 CC2D2AQ9P2K1 1620 aa23.62■■□□□ 1.37
LINC00200-201ENST00000425630 WASHC2AQ641Q2 1341 aa23.62■■□□□ 1.37
LINC00200-201ENST00000425630 MYOM3Q5VTT5 1437 aa23.62■■□□□ 1.37
LINC00200-201ENST00000425630 MSH5O43196 834 aa23.61■■□□□ 1.37
LINC00200-201ENST00000425630 CUL7Q14999 1698 aa23.6■■□□□ 1.37
LINC00200-201ENST00000425630 HSPA5P11021 654 aaKnown RBP23.6■■□□□ 1.37
LINC00200-201ENST00000425630 RRP7BPQ9NSQ0 103 aa23.6■■□□□ 1.37
LINC00200-201ENST00000425630 LRRIQ1Q96JM4 1722 aa23.59■■□□□ 1.37
LINC00200-201ENST00000425630 NESP48681 1621 aa23.58■■□□□ 1.36
LINC00200-201ENST00000425630 CHIC2Q9UKJ5 165 aa23.58■■□□□ 1.36
LINC00200-201ENST00000425630 CCDC184Q52MB2 194 aa23.55■■□□□ 1.36
LINC00200-201ENST00000425630 GRIN2BQ13224 1484 aa23.55■■□□□ 1.36
LINC00200-201ENST00000425630 BCL11AQ9H165 835 aa23.53■■□□□ 1.36
LINC00200-201ENST00000425630 TDRD9Q8NDG6 1382 aaKnown RBP23.53■■□□□ 1.36
LINC00200-201ENST00000425630 DENND4BO75064 1496 aaPredicted RBP23.53■■□□□ 1.36
LINC00200-201ENST00000425630 SAMD9Q5K651 1589 aa23.51■■□□□ 1.35
LINC00200-201ENST00000425630 MAGI3Q5TCQ9 1506 aa23.48■■□□□ 1.35
LINC00200-201ENST00000425630 SUPT6HQ7KZ85 1726 aaKnown RBP23.48■■□□□ 1.35
LINC00200-201ENST00000425630 C11orf95C9JLR9 678 aaPredicted RBP23.48■■□□□ 1.35
LINC00200-201ENST00000425630 EIF4G2P78344 907 aaKnown RBP eCLIP23.47■■□□□ 1.35
LINC00200-201ENST00000425630 CDK11AQ9UQ88 783 aaPredicted RBP23.47■■□□□ 1.35
LINC00200-201ENST00000425630 EHBP1L1Q8N3D4 1523 aa23.46■■□□□ 1.35
LINC00200-201ENST00000425630 UGGT2Q9NYU1 1516 aa23.46■■□□□ 1.35
LINC00200-201ENST00000425630 FOXD1Q16676 465 aa23.45■■□□□ 1.34
LINC00200-201ENST00000425630 KDM6BO15054 1643 aa23.44■■□□□ 1.34
LINC00200-201ENST00000425630 URB2Q14146 1524 aaKnown RBP23.43■■□□□ 1.34
LINC00200-201ENST00000425630 L3MBTL2Q969R5 705 aa23.43■■□□□ 1.34
LINC00200-201ENST00000425630 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
LINC00200-201ENST00000425630 FANCIQ9NVI1 1328 aa23.42■■□□□ 1.34
LINC00200-201ENST00000425630 MPHOSPH9Q99550 1183 aa23.42■■□□□ 1.34
LINC00200-201ENST00000425630 CNTLNQ9NXG0 1405 aa23.42■■□□□ 1.34
LINC00200-201ENST00000425630 FAM9BQ8IZU0 186 aa23.4■■□□□ 1.34
LINC00200-201ENST00000425630 THOC2Q8NI27 1593 aaKnown RBP23.4■■□□□ 1.34
LINC00200-201ENST00000425630 GAPVD1Q14C86 1478 aa23.39■■□□□ 1.34
LINC00200-201ENST00000425630 PRKRIP1Q9H875 184 aaPredicted RBP23.39■■□□□ 1.33
LINC00200-201ENST00000425630 TCOF1Q13428 1488 aaKnown RBP23.38■■□□□ 1.33
LINC00200-201ENST00000425630 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
LINC00200-201ENST00000425630 HECW1Q76N89 1606 aa23.36■■□□□ 1.33
LINC00200-201ENST00000425630 CCDC7Q96M83 1385 aa23.36■■□□□ 1.33
LINC00200-201ENST00000425630 ARID3CA6NKF2 412 aa23.35■■□□□ 1.33
LINC00200-201ENST00000425630 PPP4R2Q9NY27 417 aa23.35■■□□□ 1.33
LINC00200-201ENST00000425630 NCOA1Q15788 1441 aa23.34■■□□□ 1.33
LINC00200-201ENST00000425630 GCC2Q8IWJ2 1684 aa23.34■■□□□ 1.33
LINC00200-201ENST00000425630 NBPF8Q3BBV2 869 aa23.34■■□□□ 1.33
LINC00200-201ENST00000425630 MRS2Q9HD23 443 aa23.34■■□□□ 1.33
LINC00200-201ENST00000425630 ERICH6BQ5W0A0 696 aa23.32■■□□□ 1.32
LINC00200-201ENST00000425630 B4GALNT3Q6L9W6 998 aa23.31■■□□□ 1.32
LINC00200-201ENST00000425630 AKNAQ7Z591 1439 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms