RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 RUSC2Q8N2Y8 1516 aa31.9■■■□□ 2.7
NUP50-207ENST00000424634 CUL7Q14999 1698 aa31.9■■■□□ 2.7
NUP50-207ENST00000424634 CARMIL1Q5VZK9 1371 aa31.83■■■□□ 2.69
NUP50-207ENST00000424634 KIAA0586Q9BVV6 1533 aa31.8■■■□□ 2.68
NUP50-207ENST00000424634 RAPGEF2Q9Y4G8 1499 aa31.55■■■□□ 2.64
NUP50-207ENST00000424634 IQGAP2Q13576 1575 aa31.51■■■□□ 2.64
NUP50-207ENST00000424634 ADCY10Q96PN6 1610 aa31.5■■■□□ 2.63
NUP50-207ENST00000424634 PTPRGP23470 1445 aa31.45■■■□□ 2.63
NUP50-207ENST00000424634 NPM1P06748 294 aaKnown RBP eCLIP31.44■■■□□ 2.62
NUP50-207ENST00000424634 CARMIL2Q6F5E8 1435 aa31.43■■■□□ 2.62
NUP50-207ENST00000424634 KIF13AQ9H1H9 1805 aa31.43■■■□□ 2.62
NUP50-207ENST00000424634 TTBK1Q5TCY1 1321 aaPredicted RBP31.42■■■□□ 2.62
NUP50-207ENST00000424634 TNIKQ9UKE5 1360 aa31.41■■■□□ 2.62
NUP50-207ENST00000424634 DISP1Q96F81 1524 aa31.39■■■□□ 2.62
NUP50-207ENST00000424634 MAPKBP1O60336 1514 aa31.36■■■□□ 2.61
NUP50-207ENST00000424634 UGGT2Q9NYU1 1516 aa31.35■■■□□ 2.61
NUP50-207ENST00000424634 PRXQ9BXM0 1461 aa31.33■■■□□ 2.61
NUP50-207ENST00000424634 ABCC10Q5T3U5 1492 aa31.32■■■□□ 2.6
NUP50-207ENST00000424634 FAM69CQ0P6D2 419 aa31.3■■■□□ 2.6
NUP50-207ENST00000424634 CTTNBP2Q8WZ74 1663 aa31.27■■■□□ 2.6
NUP50-207ENST00000424634 DIP2BQ9P265 1576 aa31.24■■■□□ 2.59
NUP50-207ENST00000424634 KIAA0556O60303 1618 aa31.23■■■□□ 2.59
NUP50-207ENST00000424634 ABCC2Q92887 1545 aa31.22■■■□□ 2.59
NUP50-207ENST00000424634 UACAQ9BZF9 1416 aa31.22■■■□□ 2.59
NUP50-207ENST00000424634 UHRF1BP1LA0JNW5 1464 aa31.21■■■□□ 2.59
NUP50-207ENST00000424634 CSRNP3Q8WYN3 585 aa31.2■■■□□ 2.59
NUP50-207ENST00000424634 ASXL2Q76L83 1435 aa31.1■■■□□ 2.57
NUP50-207ENST00000424634 GOLGA3Q08378 1498 aa31.08■■■□□ 2.57
NUP50-207ENST00000424634 KDM5BQ9UGL1 1544 aa31.08■■■□□ 2.57
NUP50-207ENST00000424634 PLB1Q6P1J6 1458 aa31.05■■■□□ 2.56
NUP50-207ENST00000424634 TSPOAP1O95153 1857 aa31.05■■■□□ 2.56
NUP50-207ENST00000424634 EEA1Q15075 1411 aa31.04■■■□□ 2.56
NUP50-207ENST00000424634 FAM9AQ8IZU1 332 aaPredicted RBP31.01■■■□□ 2.55
NUP50-207ENST00000424634 ZCCHC11Q5TAX3 1644 aaKnown RBP31.01■■■□□ 2.55
NUP50-207ENST00000424634 GLI2P10070 1586 aa30.96■■■□□ 2.55
NUP50-207ENST00000424634 ABCA8O94911 1581 aa30.96■■■□□ 2.55
NUP50-207ENST00000424634 P3H3Q8IVL6 736 aa30.95■■■□□ 2.55
NUP50-207ENST00000424634 CHIC1Q5VXU3 224 aa30.94■■■□□ 2.54
NUP50-207ENST00000424634 EPRSP07814 1512 aaKnown RBP30.91■■■□□ 2.54
NUP50-207ENST00000424634 PPRC1Q5VV67 1664 aaKnown RBP30.89■■■□□ 2.54
NUP50-207ENST00000424634 KDM6BO15054 1643 aa30.87■■■□□ 2.53
NUP50-207ENST00000424634 SAMD9Q5K651 1589 aa30.86■■■□□ 2.53
NUP50-207ENST00000424634 WDR7Q9Y4E6 1490 aa30.82■■■□□ 2.53
NUP50-207ENST00000424634 MAP3K4Q9Y6R4 1608 aa30.81■■■□□ 2.52
NUP50-207ENST00000424634 KIF21BO75037 1637 aa30.8■■■□□ 2.52
NUP50-207ENST00000424634 RANGAP1P46060 587 aaPredicted RBP30.79■■■□□ 2.52
NUP50-207ENST00000424634 AEBP2Q6ZN18 517 aaPredicted RBP30.78■■■□□ 2.52
NUP50-207ENST00000424634 ARID3CA6NKF2 412 aa30.75■■■□□ 2.51
NUP50-207ENST00000424634 KCNH8Q96L42 1107 aa30.74■■■□□ 2.51
NUP50-207ENST00000424634 ATP10BO94823 1461 aa30.73■■■□□ 2.51
NUP50-207ENST00000424634 COL17A1Q9UMD9 1497 aaPredicted RBP30.69■■■□□ 2.5
NUP50-207ENST00000424634 FHOD3Q2V2M9 1422 aa30.68■■■□□ 2.5
NUP50-207ENST00000424634 EHMT2Q96KQ7 1210 aa30.67■■■□□ 2.5
NUP50-207ENST00000424634 RAPGEF6Q8TEU7 1601 aa30.66■■■□□ 2.5
NUP50-207ENST00000424634 TEX14Q8IWB6 1497 aa30.65■■■□□ 2.5
NUP50-207ENST00000424634 CD109Q6YHK3 1445 aa30.63■■■□□ 2.49
NUP50-207ENST00000424634 CFAP43Q8NDM7 1665 aa30.62■■■□□ 2.49
NUP50-207ENST00000424634 UBTFP17480 764 aaKnown RBP30.59■■■□□ 2.49
NUP50-207ENST00000424634 NUP153P49790 1475 aaKnown RBP30.58■■■□□ 2.49
NUP50-207ENST00000424634 MAGI3Q5TCQ9 1506 aa30.57■■■□□ 2.49
NUP50-207ENST00000424634 EFCAB5A4FU69 1503 aa30.57■■■□□ 2.48
NUP50-207ENST00000424634 KDM4FA0A1W2PPD8 638 aa30.52■■■□□ 2.48
NUP50-207ENST00000424634 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.52■■■□□ 2.48
NUP50-207ENST00000424634 HNRNPUL2Q1KMD3 747 aaKnown RBP30.52■■■□□ 2.48
NUP50-207ENST00000424634 ABCA9Q8IUA7 1624 aa30.46■■■□□ 2.47
NUP50-207ENST00000424634 ARHGAP35Q9NRY4 1499 aa30.42■■■□□ 2.46
NUP50-207ENST00000424634 PLEKHD1A6NEE1 506 aa30.38■■■□□ 2.45
NUP50-207ENST00000424634 ARAP3Q8WWN8 1544 aa30.34■■■□□ 2.45
NUP50-207ENST00000424634 CDK13Q14004 1512 aaKnown RBP30.32■■■□□ 2.44
NUP50-207ENST00000424634 FMN1Q68DA7 1419 aa30.3■■■□□ 2.44
NUP50-207ENST00000424634 PHLDB1Q86UU1 1377 aa30.28■■■□□ 2.44
NUP50-207ENST00000424634 ADGRL1O94910 1474 aa30.27■■■□□ 2.44
NUP50-207ENST00000424634 ATP1B4Q9UN42 357 aaPredicted RBP30.27■■■□□ 2.44
NUP50-207ENST00000424634 NEO1Q92859 1461 aa30.25■■■□□ 2.43
NUP50-207ENST00000424634 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.24■■■□□ 2.43
NUP50-207ENST00000424634 RAPGEF3O95398 923 aa30.22■■■□□ 2.43
NUP50-207ENST00000424634 HECW1Q76N89 1606 aa30.21■■■□□ 2.43
NUP50-207ENST00000424634 TTC37Q6PGP7 1564 aa30.19■■■□□ 2.42
NUP50-207ENST00000424634 LRRIQ1Q96JM4 1722 aa30.14■■■□□ 2.42
NUP50-207ENST00000424634 FRMPD1Q5SYB0 1578 aa30.12■■■□□ 2.41
NUP50-207ENST00000424634 AKNAQ7Z591 1439 aa30.12■■■□□ 2.41
NUP50-207ENST00000424634 FANCAO15360 1455 aa30.11■■■□□ 2.41
NUP50-207ENST00000424634 CDK11AQ9UQ88 783 aaPredicted RBP30.09■■■□□ 2.41
NUP50-207ENST00000424634 PLCH2O75038 1416 aa30.05■■■□□ 2.4
NUP50-207ENST00000424634 DENND4BO75064 1496 aaPredicted RBP30.05■■■□□ 2.4
NUP50-207ENST00000424634 CASKIN1Q8WXD9 1431 aa30.05■■■□□ 2.4
NUP50-207ENST00000424634 CFAP74Q9C0B2 1584 aa30.04■■■□□ 2.4
NUP50-207ENST00000424634 KIF14Q15058 1648 aa30.04■■■□□ 2.4
NUP50-207ENST00000424634 PCF11O94913 1555 aaKnown RBP30.03■■■□□ 2.4
NUP50-207ENST00000424634 RICTORQ6R327 1708 aa30.03■■■□□ 2.4
NUP50-207ENST00000424634 CLIP1P30622 1438 aa30.03■■■□□ 2.4
NUP50-207ENST00000424634 TROQ12816 1431 aaPredicted RBP30.03■■■□□ 2.4
NUP50-207ENST00000424634 MYO5CQ9NQX4 1742 aa29.96■■■□□ 2.39
NUP50-207ENST00000424634 CCDC18Q5T9S5 1454 aa29.93■■■□□ 2.38
NUP50-207ENST00000424634 EFCAB2Q5VUJ9 269 aa29.93■■■□□ 2.38
NUP50-207ENST00000424634 SCAPERQ9BY12 1400 aa29.93■■■□□ 2.38
NUP50-207ENST00000424634 FYCO1Q9BQS8 1478 aa29.91■■■□□ 2.38
NUP50-207ENST00000424634 ZMYM4Q5VZL5 1548 aa29.89■■■□□ 2.38
NUP50-207ENST00000424634 ARHGEF40Q8TER5 1519 aa29.89■■■□□ 2.38
NUP50-207ENST00000424634 ADAMTSL3P82987 1691 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms