RNA–Protein interactions for RNA: ENST00000424542.6

SLC9A3R2-201, Transcript of SLC9A3 regulator 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC9A3R2, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R2-201ENST00000424542 CTTNBP2Q8WZ74 1663 aa36.76■■■■□ 3.48
SLC9A3R2-201ENST00000424542 CLSPNQ9HAW4 1339 aa36.76■■■■□ 3.47
SLC9A3R2-201ENST00000424542 LRRC9Q6ZRR7 1453 aa36.75■■■■□ 3.47
SLC9A3R2-201ENST00000424542 KIF21AQ7Z4S6 1674 aa36.74■■■■□ 3.47
SLC9A3R2-201ENST00000424542 PCF11O94913 1555 aaKnown RBP36.73■■■■□ 3.47
SLC9A3R2-201ENST00000424542 ZNF316A6NFI3 1004 aaPredicted RBP36.73■■■■□ 3.47
SLC9A3R2-201ENST00000424542 CFAP43Q8NDM7 1665 aa36.71■■■■□ 3.47
SLC9A3R2-201ENST00000424542 DHX57Q6P158 1386 aaKnown RBP36.7■■■■□ 3.47
SLC9A3R2-201ENST00000424542 GAPVD1Q14C86 1478 aa36.69■■■■□ 3.46
SLC9A3R2-201ENST00000424542 TDRD9Q8NDG6 1382 aaKnown RBP36.69■■■■□ 3.46
SLC9A3R2-201ENST00000424542 FHOD3Q2V2M9 1422 aa36.67■■■■□ 3.46
SLC9A3R2-201ENST00000424542 P3H3Q8IVL6 736 aa36.64■■■■□ 3.46
SLC9A3R2-201ENST00000424542 AQRO60306 1485 aaKnown RBP eCLIP36.64■■■■□ 3.465e-7■■■■■ 29.6
SLC9A3R2-201ENST00000424542 FYCO1Q9BQS8 1478 aa36.64■■■■□ 3.46
SLC9A3R2-201ENST00000424542 CASKIN1Q8WXD9 1431 aa36.6■■■■□ 3.45
SLC9A3R2-201ENST00000424542 TARBP1Q13395 1621 aaKnown RBP36.58■■■■□ 3.45
SLC9A3R2-201ENST00000424542 PHLDB1Q86UU1 1377 aa36.53■■■■□ 3.44
SLC9A3R2-201ENST00000424542 FMN1Q68DA7 1419 aa36.52■■■■□ 3.44
SLC9A3R2-201ENST00000424542 SAMD9Q5K651 1589 aa36.49■■■■□ 3.43
SLC9A3R2-201ENST00000424542 SNAPC4Q5SXM2 1469 aa36.43■■■■□ 3.42
SLC9A3R2-201ENST00000424542 ITGAEP38570 1179 aa36.42■■■■□ 3.42
SLC9A3R2-201ENST00000424542 ATP1B4Q9UN42 357 aaPredicted RBP36.42■■■■□ 3.42
SLC9A3R2-201ENST00000424542 MRC2Q9UBG0 1479 aa36.4■■■■□ 3.42
SLC9A3R2-201ENST00000424542 RAB3GAP2Q9H2M9 1393 aa36.36■■■■□ 3.41
SLC9A3R2-201ENST00000424542 PBRM1Q86U86 1689 aa36.34■■■■□ 3.41
SLC9A3R2-201ENST00000424542 SETD5Q9C0A6 1442 aa36.3■■■■□ 3.4
SLC9A3R2-201ENST00000424542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.29■■■■□ 3.4
SLC9A3R2-201ENST00000424542 FAM50AQ14320 339 aaKnown RBP36.26■■■■□ 3.4
SLC9A3R2-201ENST00000424542 THOC2Q8NI27 1593 aaKnown RBP36.26■■■■□ 3.39
SLC9A3R2-201ENST00000424542 GRIN2BQ13224 1484 aa36.25■■■■□ 3.39
SLC9A3R2-201ENST00000424542 ADAMTS12P58397 1594 aa36.23■■■■□ 3.39
SLC9A3R2-201ENST00000424542 SCAF1Q9H7N4 1312 aaKnown RBP36.2■■■■□ 3.39
SLC9A3R2-201ENST00000424542 LRRIQ1Q96JM4 1722 aa36.18■■■■□ 3.38
SLC9A3R2-201ENST00000424542 MAPKBP1O60336 1514 aa36.17■■■■□ 3.38
SLC9A3R2-201ENST00000424542 MTUS2Q5JR59 1369 aa36.16■■■■□ 3.38
SLC9A3R2-201ENST00000424542 ACIN1Q9UKV3 1341 aaKnown RBP36.16■■■■□ 3.38
SLC9A3R2-201ENST00000424542 WDR62O43379 1518 aa36.15■■■■□ 3.38
SLC9A3R2-201ENST00000424542 IFT140Q96RY7 1462 aa36.14■■■■□ 3.38
SLC9A3R2-201ENST00000424542 FGD6Q6ZV73 1430 aa36.14■■■■□ 3.38
SLC9A3R2-201ENST00000424542 IQGAP2Q13576 1575 aa36.13■■■■□ 3.37
SLC9A3R2-201ENST00000424542 CENPBP07199 599 aaPredicted RBP36.09■■■■□ 3.37
SLC9A3R2-201ENST00000424542 NEUROD1Q13562 356 aa36.07■■■■□ 3.36
SLC9A3R2-201ENST00000424542 EHBP1L1Q8N3D4 1523 aa36.06■■■■□ 3.36
SLC9A3R2-201ENST00000424542 NCOA2Q15596 1464 aa36.03■■■■□ 3.36
SLC9A3R2-201ENST00000424542 CCDC18Q5T9S5 1454 aa36.03■■■■□ 3.36
SLC9A3R2-201ENST00000424542 ZNF608Q9ULD9 1512 aaPredicted RBP36.03■■■■□ 3.36
SLC9A3R2-201ENST00000424542 MIER1Q8N108 512 aa36.02■■■■□ 3.36
SLC9A3R2-201ENST00000424542 SUPT6HQ7KZ85 1726 aaKnown RBP36.01■■■■□ 3.35
SLC9A3R2-201ENST00000424542 MYOM3Q5VTT5 1437 aa35.98■■■■□ 3.35
SLC9A3R2-201ENST00000424542 HECW1Q76N89 1606 aa35.97■■■■□ 3.35
SLC9A3R2-201ENST00000424542 UGGT2Q9NYU1 1516 aa35.95■■■■□ 3.35
SLC9A3R2-201ENST00000424542 ARHGEF11O15085 1522 aa35.94■■■■□ 3.34
SLC9A3R2-201ENST00000424542 MAGI3Q5TCQ9 1506 aa35.92■■■■□ 3.34
SLC9A3R2-201ENST00000424542 EPRSP07814 1512 aaKnown RBP35.86■■■■□ 3.33
SLC9A3R2-201ENST00000424542 HFM1A2PYH4 1435 aa35.85■■■■□ 3.33
SLC9A3R2-201ENST00000424542 PTPRKQ15262 1439 aa35.85■■■■□ 3.33
SLC9A3R2-201ENST00000424542 EIF4G3O43432 1585 aaKnown RBP35.85■■■■□ 3.33
SLC9A3R2-201ENST00000424542 KIAA0586Q9BVV6 1533 aa35.85■■■■□ 3.33
SLC9A3R2-201ENST00000424542 ERCC6Q03468 1493 aa35.81■■■■□ 3.32
SLC9A3R2-201ENST00000424542 PTPN23Q9H3S7 1636 aa35.81■■■■□ 3.32
SLC9A3R2-201ENST00000424542 GRIN2AQ12879 1464 aa35.78■■■■□ 3.32
SLC9A3R2-201ENST00000424542 TIMELESSQ9UNS1 1208 aa35.78■■■■□ 3.32
SLC9A3R2-201ENST00000424542 TCOF1Q13428 1488 aaKnown RBP35.75■■■■□ 3.31
SLC9A3R2-201ENST00000424542 KIAA0556O60303 1618 aa35.75■■■■□ 3.31
SLC9A3R2-201ENST00000424542 SIN3AQ96ST3 1273 aa35.75■■■■□ 3.31
SLC9A3R2-201ENST00000424542 DISP1Q96F81 1524 aa35.74■■■■□ 3.31
SLC9A3R2-201ENST00000424542 CDK13Q14004 1512 aaKnown RBP35.73■■■■□ 3.31
SLC9A3R2-201ENST00000424542 NAIPQ13075 1403 aa35.72■■■■□ 3.31
SLC9A3R2-201ENST00000424542 UACAQ9BZF9 1416 aa35.7■■■■□ 3.31
SLC9A3R2-201ENST00000424542 MAGI1Q96QZ7 1491 aaPredicted RBP35.7■■■■□ 3.31
SLC9A3R2-201ENST00000424542 YTHDC1Q96MU7 727 aaKnown RBP35.68■■■■□ 3.3
SLC9A3R2-201ENST00000424542 MIA2Q96PC5 1412 aa35.65■■■■□ 3.3
SLC9A3R2-201ENST00000424542 GTF3C3Q9Y5Q9 886 aa35.62■■■■□ 3.29
SLC9A3R2-201ENST00000424542 SYNJ2O15056 1496 aa35.59■■■■□ 3.29
SLC9A3R2-201ENST00000424542 NUP153P49790 1475 aaKnown RBP35.56■■■■□ 3.28
SLC9A3R2-201ENST00000424542 AKNAQ7Z591 1439 aa35.56■■■■□ 3.28
SLC9A3R2-201ENST00000424542 RAPGEF6Q8TEU7 1601 aa35.55■■■■□ 3.28
SLC9A3R2-201ENST00000424542 CEP170Q5SW79 1584 aa35.53■■■■□ 3.28
SLC9A3R2-201ENST00000424542 GCC2Q8IWJ2 1684 aa35.53■■■■□ 3.28
SLC9A3R2-201ENST00000424542 PPP1R15AO75807 674 aaPredicted RBP35.51■■■■□ 3.28
SLC9A3R2-201ENST00000424542 CHMP7Q8WUX9 453 aaPredicted RBP35.51■■■■□ 3.27
SLC9A3R2-201ENST00000424542 ARID3CA6NKF2 412 aa35.49■■■■□ 3.27
SLC9A3R2-201ENST00000424542 NUP160Q12769 1436 aa35.44■■■■□ 3.26
SLC9A3R2-201ENST00000424542 TONSLQ96HA7 1378 aa35.42■■■■□ 3.26
SLC9A3R2-201ENST00000424542 RRP7BPQ9NSQ0 103 aa35.42■■■■□ 3.26
SLC9A3R2-201ENST00000424542 CHIC2Q9UKJ5 165 aa35.4■■■■□ 3.26
SLC9A3R2-201ENST00000424542 CDK11AQ9UQ88 783 aaPredicted RBP35.4■■■■□ 3.26
SLC9A3R2-201ENST00000424542 CARMIL2Q6F5E8 1435 aa35.34■■■■□ 3.25
SLC9A3R2-201ENST00000424542 FBLN2P98095 1184 aa35.32■■■■□ 3.25
SLC9A3R2-201ENST00000424542 KDM6BO15054 1643 aa35.31■■■■□ 3.24
SLC9A3R2-201ENST00000424542 DAPK1P53355 1430 aa35.31■■■■□ 3.24
SLC9A3R2-201ENST00000424542 TROQ12816 1431 aaPredicted RBP35.31■■■■□ 3.24
SLC9A3R2-201ENST00000424542 PLB1Q6P1J6 1458 aa35.31■■■■□ 3.24
SLC9A3R2-201ENST00000424542 ROCK1Q13464 1354 aa35.31■■■■□ 3.24
SLC9A3R2-201ENST00000424542 DNMT1P26358 1616 aaKnown RBP35.3■■■■□ 3.24
SLC9A3R2-201ENST00000424542 DENND4BO75064 1496 aaPredicted RBP35.29■■■■□ 3.24
SLC9A3R2-201ENST00000424542 JPH4Q96JJ6 628 aa35.28■■■■□ 3.24
SLC9A3R2-201ENST00000424542 ABCC5O15440 1437 aa35.26■■■■□ 3.23
SLC9A3R2-201ENST00000424542 PRG4Q92954 1404 aaPredicted RBP35.25■■■■□ 3.23
SLC9A3R2-201ENST00000424542 KDM5BQ9UGL1 1544 aa35.23■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms