RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 RUSC2Q8N2Y8 1516 aa27.95■■■□□ 2.06
RPUSD3-204ENST00000424438 MAPKBP1O60336 1514 aa27.91■■■□□ 2.06
RPUSD3-204ENST00000424438 ABCC10Q5T3U5 1492 aa27.89■■■□□ 2.05
RPUSD3-204ENST00000424438 FAM69CQ0P6D2 419 aa27.83■■■□□ 2.05
RPUSD3-204ENST00000424438 DIP2BQ9P265 1576 aa27.79■■■□□ 2.04
RPUSD3-204ENST00000424438 KIAA0586Q9BVV6 1533 aa27.79■■■□□ 2.04
RPUSD3-204ENST00000424438 NPM1P06748 294 aaKnown RBP eCLIP27.79■■■□□ 2.04
RPUSD3-204ENST00000424438 ILDR1Q86SU0 546 aaPredicted RBP27.78■■■□□ 2.04
RPUSD3-204ENST00000424438 ADCY10Q96PN6 1610 aa27.78■■■□□ 2.04
RPUSD3-204ENST00000424438 CUL7Q14999 1698 aa27.75■■■□□ 2.03
RPUSD3-204ENST00000424438 KDM4FA0A1W2PPD8 638 aa27.71■■■□□ 2.03
RPUSD3-204ENST00000424438 IGF1RP08069 1367 aa27.69■■■□□ 2.02
RPUSD3-204ENST00000424438 KIF27Q86VH2 1401 aa27.67■■■□□ 2.02
RPUSD3-204ENST00000424438 KDM6BO15054 1643 aa27.61■■■□□ 2.01
RPUSD3-204ENST00000424438 PTPRGP23470 1445 aa27.53■■■□□ 2
RPUSD3-204ENST00000424438 ABCC2Q92887 1545 aa27.51■■□□□ 1.99
RPUSD3-204ENST00000424438 CARMIL2Q6F5E8 1435 aa27.5■■□□□ 1.99
RPUSD3-204ENST00000424438 TSPOAP1O95153 1857 aa27.49■■□□□ 1.99
RPUSD3-204ENST00000424438 CARMIL1Q5VZK9 1371 aa27.48■■□□□ 1.99
RPUSD3-204ENST00000424438 TNIKQ9UKE5 1360 aa27.48■■□□□ 1.99
RPUSD3-204ENST00000424438 GLI2P10070 1586 aa27.48■■□□□ 1.99
RPUSD3-204ENST00000424438 UHRF1BP1LA0JNW5 1464 aa27.46■■□□□ 1.99
RPUSD3-204ENST00000424438 PLB1Q6P1J6 1458 aa27.45■■□□□ 1.99
RPUSD3-204ENST00000424438 IQGAP2Q13576 1575 aa27.43■■□□□ 1.98
RPUSD3-204ENST00000424438 ASXL2Q76L83 1435 aa27.39■■□□□ 1.97
RPUSD3-204ENST00000424438 PPRC1Q5VV67 1664 aaKnown RBP27.39■■□□□ 1.97
RPUSD3-204ENST00000424438 UACAQ9BZF9 1416 aa27.34■■□□□ 1.97
RPUSD3-204ENST00000424438 DISP1Q96F81 1524 aa27.32■■□□□ 1.96
RPUSD3-204ENST00000424438 KDM5BQ9UGL1 1544 aa27.31■■□□□ 1.96
RPUSD3-204ENST00000424438 ADGRL1O94910 1474 aa27.31■■□□□ 1.96
RPUSD3-204ENST00000424438 UGGT2Q9NYU1 1516 aa27.3■■□□□ 1.96
RPUSD3-204ENST00000424438 MAP3K4Q9Y6R4 1608 aa27.27■■□□□ 1.96
RPUSD3-204ENST00000424438 EPRSP07814 1512 aaKnown RBP27.25■■□□□ 1.95
RPUSD3-204ENST00000424438 TEX14Q8IWB6 1497 aa27.23■■□□□ 1.95
RPUSD3-204ENST00000424438 TTBK1Q5TCY1 1321 aaPredicted RBP27.22■■□□□ 1.95
RPUSD3-204ENST00000424438 RAPGEF2Q9Y4G8 1499 aa27.22■■□□□ 1.95
RPUSD3-204ENST00000424438 KIAA0556O60303 1618 aa27.19■■□□□ 1.94
RPUSD3-204ENST00000424438 ZCCHC11Q5TAX3 1644 aaKnown RBP27.19■■□□□ 1.94
RPUSD3-204ENST00000424438 COL17A1Q9UMD9 1497 aaPredicted RBP27.17■■□□□ 1.94
RPUSD3-204ENST00000424438 HECW2Q9P2P5 1572 aa27.17■■□□□ 1.94
RPUSD3-204ENST00000424438 WDR7Q9Y4E6 1490 aa27.1■■□□□ 1.93
RPUSD3-204ENST00000424438 CTTNBP2Q8WZ74 1663 aa27.05■■□□□ 1.92
RPUSD3-204ENST00000424438 GOLGA3Q08378 1498 aa27.03■■□□□ 1.92
RPUSD3-204ENST00000424438 MAGI3Q5TCQ9 1506 aa27.03■■□□□ 1.92
RPUSD3-204ENST00000424438 CFAP43Q8NDM7 1665 aa27.02■■□□□ 1.92
RPUSD3-204ENST00000424438 ABCA8O94911 1581 aa27■■□□□ 1.91
RPUSD3-204ENST00000424438 FBXO41Q8TF61 875 aa26.98■■□□□ 1.91
RPUSD3-204ENST00000424438 CD109Q6YHK3 1445 aa26.93■■□□□ 1.9
RPUSD3-204ENST00000424438 PRXQ9BXM0 1461 aa26.88■■□□□ 1.89
RPUSD3-204ENST00000424438 ARAP3Q8WWN8 1544 aa26.84■■□□□ 1.89
RPUSD3-204ENST00000424438 PHLDB1Q86UU1 1377 aa26.79■■□□□ 1.88
RPUSD3-204ENST00000424438 KCNH8Q96L42 1107 aa26.74■■□□□ 1.87
RPUSD3-204ENST00000424438 ABCA9Q8IUA7 1624 aa26.73■■□□□ 1.87
RPUSD3-204ENST00000424438 FAM9AQ8IZU1 332 aaPredicted RBP26.72■■□□□ 1.87
RPUSD3-204ENST00000424438 KIF21BO75037 1637 aa26.72■■□□□ 1.87
RPUSD3-204ENST00000424438 ATP10BO94823 1461 aa26.71■■□□□ 1.87
RPUSD3-204ENST00000424438 SAMD9Q5K651 1589 aa26.66■■□□□ 1.86
RPUSD3-204ENST00000424438 NEO1Q92859 1461 aa26.65■■□□□ 1.86
RPUSD3-204ENST00000424438 ADAMTSL3P82987 1691 aa26.63■■□□□ 1.85
RPUSD3-204ENST00000424438 RAPGEF6Q8TEU7 1601 aa26.59■■□□□ 1.85
RPUSD3-204ENST00000424438 PTPRMP28827 1452 aa26.55■■□□□ 1.84
RPUSD3-204ENST00000424438 BCORL1Q5H9F3 1711 aa26.52■■□□□ 1.84
RPUSD3-204ENST00000424438 FRMPD1Q5SYB0 1578 aa26.52■■□□□ 1.84
RPUSD3-204ENST00000424438 LMTK3Q96Q04 1460 aa26.51■■□□□ 1.83
RPUSD3-204ENST00000424438 NUP153P49790 1475 aaKnown RBP26.49■■□□□ 1.83
RPUSD3-204ENST00000424438 P3H3Q8IVL6 736 aa26.47■■□□□ 1.83
RPUSD3-204ENST00000424438 CSRNP3Q8WYN3 585 aa26.47■■□□□ 1.83
RPUSD3-204ENST00000424438 RAPGEF3O95398 923 aa26.46■■□□□ 1.83
RPUSD3-204ENST00000424438 ARHGEF40Q8TER5 1519 aa26.44■■□□□ 1.82
RPUSD3-204ENST00000424438 ARID4BQ4LE39 1312 aaPredicted RBP26.44■■□□□ 1.82
RPUSD3-204ENST00000424438 ARID3CA6NKF2 412 aa26.44■■□□□ 1.82
RPUSD3-204ENST00000424438 EEA1Q15075 1411 aa26.44■■□□□ 1.82
RPUSD3-204ENST00000424438 PCF11O94913 1555 aaKnown RBP26.43■■□□□ 1.82
RPUSD3-204ENST00000424438 CFAP74Q9C0B2 1584 aa26.42■■□□□ 1.82
RPUSD3-204ENST00000424438 MADDQ8WXG6 1647 aa26.42■■□□□ 1.82
RPUSD3-204ENST00000424438 RICTORQ6R327 1708 aa26.42■■□□□ 1.82
RPUSD3-204ENST00000424438 FHOD3Q2V2M9 1422 aa26.4■■□□□ 1.82
RPUSD3-204ENST00000424438 DENND4BO75064 1496 aaPredicted RBP26.38■■□□□ 1.81
RPUSD3-204ENST00000424438 ZMYM4Q5VZL5 1548 aa26.37■■□□□ 1.81
RPUSD3-204ENST00000424438 PLEKHD1A6NEE1 506 aa26.34■■□□□ 1.81
RPUSD3-204ENST00000424438 EFCAB5A4FU69 1503 aa26.34■■□□□ 1.81
RPUSD3-204ENST00000424438 AKNAQ7Z591 1439 aa26.33■■□□□ 1.81
RPUSD3-204ENST00000424438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.33■■□□□ 1.81
RPUSD3-204ENST00000424438 HNRNPUL2Q1KMD3 747 aaKnown RBP26.33■■□□□ 1.81
RPUSD3-204ENST00000424438 FANCAO15360 1455 aa26.32■■□□□ 1.8
RPUSD3-204ENST00000424438 MAGI2Q86UL8 1455 aa26.32■■□□□ 1.8
RPUSD3-204ENST00000424438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.31■■□□□ 1.8
RPUSD3-204ENST00000424438 RIMS1Q86UR5 1692 aaKnown RBP26.29■■□□□ 1.8
RPUSD3-204ENST00000424438 CERKQ8TCT0 537 aa26.29■■□□□ 1.8
RPUSD3-204ENST00000424438 POGZQ7Z3K3 1410 aa26.29■■□□□ 1.8
RPUSD3-204ENST00000424438 HSPA2P54652 639 aa26.27■■□□□ 1.8
RPUSD3-204ENST00000424438 TTC37Q6PGP7 1564 aa26.25■■□□□ 1.79
RPUSD3-204ENST00000424438 ZFYVE16Q7Z3T8 1539 aa26.24■■□□□ 1.79
RPUSD3-204ENST00000424438 DISP3Q9P2K9 1392 aa26.24■■□□□ 1.79
RPUSD3-204ENST00000424438 PLPPR3Q6T4P5 718 aa26.23■■□□□ 1.79
RPUSD3-204ENST00000424438 SOCS7O14512 581 aa26.22■■□□□ 1.79
RPUSD3-204ENST00000424438 SIGLEC1Q9BZZ2 1709 aa26.17■■□□□ 1.78
RPUSD3-204ENST00000424438 PLCH2O75038 1416 aa26.17■■□□□ 1.78
RPUSD3-204ENST00000424438 HECW1Q76N89 1606 aa26.17■■□□□ 1.78
RPUSD3-204ENST00000424438 YEATS2Q9ULM3 1422 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms