RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 EHMT2Q96KQ7 1210 aa22.8■■□□□ 1.24
ACTN4-203ENST00000424234 SHROOM2Q13796 1616 aa22.79■■□□□ 1.24
ACTN4-203ENST00000424234 KIAA0586Q9BVV6 1533 aa22.77■■□□□ 1.24
ACTN4-203ENST00000424234 LOC105371045A0A1W2PR82 267 aa22.7■■□□□ 1.22
ACTN4-203ENST00000424234 UBTFP17480 764 aaKnown RBP22.69■■□□□ 1.22
ACTN4-203ENST00000424234 OSCARQ8IYS5 282 aa22.69■■□□□ 1.22
ACTN4-203ENST00000424234 TNIKQ9UKE5 1360 aa22.68■■□□□ 1.22
ACTN4-203ENST00000424234 UGGT2Q9NYU1 1516 aa22.68■■□□□ 1.22
ACTN4-203ENST00000424234 SAMD9Q5K651 1589 aa22.67■■□□□ 1.22
ACTN4-203ENST00000424234 KIAA0556O60303 1618 aa22.63■■□□□ 1.21
ACTN4-203ENST00000424234 EFCAB5A4FU69 1503 aa22.61■■□□□ 1.21
ACTN4-203ENST00000424234 ERCC6L2Q5T890 1561 aa22.6■■□□□ 1.21
ACTN4-203ENST00000424234 DISP1Q96F81 1524 aa22.58■■□□□ 1.2
ACTN4-203ENST00000424234 CEP162Q5TB80 1403 aa22.56■■□□□ 1.2
ACTN4-203ENST00000424234 PRG4Q92954 1404 aaPredicted RBP22.53■■□□□ 1.2
ACTN4-203ENST00000424234 ARHGAP35Q9NRY4 1499 aa22.53■■□□□ 1.2
ACTN4-203ENST00000424234 JPH4Q96JJ6 628 aa22.53■■□□□ 1.2
ACTN4-203ENST00000424234 RIMBP3CA6NJZ7 1639 aa22.52■■□□□ 1.2
ACTN4-203ENST00000424234 RIMBP3BA6NNM3 1639 aa22.52■■□□□ 1.2
ACTN4-203ENST00000424234 RIMBP3Q9UFD9 1639 aa22.52■■□□□ 1.2
ACTN4-203ENST00000424234 ARHGEF11O15085 1522 aa22.52■■□□□ 1.2
ACTN4-203ENST00000424234 CLIP1P30622 1438 aa22.51■■□□□ 1.19
ACTN4-203ENST00000424234 RANGAP1P46060 587 aaPredicted RBP22.48■■□□□ 1.19
ACTN4-203ENST00000424234 CARMIL2Q6F5E8 1435 aa22.48■■□□□ 1.19
ACTN4-203ENST00000424234 ARAP1Q96P48 1450 aa22.45■■□□□ 1.18
ACTN4-203ENST00000424234 FHOD3Q2V2M9 1422 aa22.44■■□□□ 1.18
ACTN4-203ENST00000424234 P3H3Q8IVL6 736 aa22.35■■□□□ 1.17
ACTN4-203ENST00000424234 PCF11O94913 1555 aaKnown RBP22.35■■□□□ 1.17
ACTN4-203ENST00000424234 LRRIQ1Q96JM4 1722 aa22.34■■□□□ 1.17
ACTN4-203ENST00000424234 RAPGEF6Q8TEU7 1601 aa22.33■■□□□ 1.17
ACTN4-203ENST00000424234 ABCA8O94911 1581 aa22.31■■□□□ 1.16
ACTN4-203ENST00000424234 FMN1Q68DA7 1419 aa22.29■■□□□ 1.16
ACTN4-203ENST00000424234 PTPRGP23470 1445 aa22.29■■□□□ 1.16
ACTN4-203ENST00000424234 ADCY10Q96PN6 1610 aa22.28■■□□□ 1.16
ACTN4-203ENST00000424234 HECW1Q76N89 1606 aa22.27■■□□□ 1.16
ACTN4-203ENST00000424234 PLB1Q6P1J6 1458 aa22.26■■□□□ 1.15
ACTN4-203ENST00000424234 VPS8Q8N3P4 1428 aa22.26■■□□□ 1.15
ACTN4-203ENST00000424234 DNAJC5Q9H3Z4 198 aa22.25■■□□□ 1.15
ACTN4-203ENST00000424234 ABCC2Q92887 1545 aa22.25■■□□□ 1.15
ACTN4-203ENST00000424234 FYCO1Q9BQS8 1478 aa22.22■■□□□ 1.15
ACTN4-203ENST00000424234 TTBK1Q5TCY1 1321 aaPredicted RBP22.22■■□□□ 1.15
ACTN4-203ENST00000424234 UACAQ9BZF9 1416 aa22.2■■□□□ 1.14
ACTN4-203ENST00000424234 CFAP43Q8NDM7 1665 aa22.2■■□□□ 1.14
ACTN4-203ENST00000424234 CASKIN1Q8WXD9 1431 aa22.19■■□□□ 1.14
ACTN4-203ENST00000424234 UHRF1BP1LA0JNW5 1464 aa22.19■■□□□ 1.14
ACTN4-203ENST00000424234 NUP153P49790 1475 aaKnown RBP22.18■■□□□ 1.14
ACTN4-203ENST00000424234 ZCCHC11Q5TAX3 1644 aaKnown RBP22.17■■□□□ 1.14
ACTN4-203ENST00000424234 PCGF6Q9BYE7 350 aa22.14■■□□□ 1.13
ACTN4-203ENST00000424234 CDK13Q14004 1512 aaKnown RBP22.11■■□□□ 1.13
ACTN4-203ENST00000424234 EPRSP07814 1512 aaKnown RBP22.1■■□□□ 1.13
ACTN4-203ENST00000424234 KDM5BQ9UGL1 1544 aa22.1■■□□□ 1.13
ACTN4-203ENST00000424234 CYB5RLQ6IPT4 315 aa22.09■■□□□ 1.13
ACTN4-203ENST00000424234 CCDC18Q5T9S5 1454 aa22.08■■□□□ 1.13
ACTN4-203ENST00000424234 TIAM1Q13009 1591 aa22.08■■□□□ 1.12
ACTN4-203ENST00000424234 HRCP23327 699 aa22.06■■□□□ 1.12
ACTN4-203ENST00000424234 ATP10BO94823 1461 aa22.04■■□□□ 1.12
ACTN4-203ENST00000424234 MAP3K1Q13233 1512 aa22.02■■□□□ 1.12
ACTN4-203ENST00000424234 TRIM26Q12899 539 aaPredicted RBP22.01■■□□□ 1.11
ACTN4-203ENST00000424234 ATP1B4Q9UN42 357 aaPredicted RBP21.99■■□□□ 1.11
ACTN4-203ENST00000424234 MAPKBP1O60336 1514 aa21.98■■□□□ 1.11
ACTN4-203ENST00000424234 MAGI3Q5TCQ9 1506 aa21.98■■□□□ 1.11
ACTN4-203ENST00000424234 ARID3CA6NKF2 412 aa21.98■■□□□ 1.11
ACTN4-203ENST00000424234 EHBP1L1Q8N3D4 1523 aa21.94■■□□□ 1.1
ACTN4-203ENST00000424234 KIF14Q15058 1648 aa21.91■■□□□ 1.1
ACTN4-203ENST00000424234 KIF13AQ9H1H9 1805 aa21.91■■□□□ 1.1
ACTN4-203ENST00000424234 WDR7Q9Y4E6 1490 aa21.9■■□□□ 1.1
ACTN4-203ENST00000424234 SUPT6HQ7KZ85 1726 aaKnown RBP21.9■■□□□ 1.1
ACTN4-203ENST00000424234 ASXL2Q76L83 1435 aa21.9■■□□□ 1.1
ACTN4-203ENST00000424234 LRRC9Q6ZRR7 1453 aa21.89■■□□□ 1.09
ACTN4-203ENST00000424234 TROQ12816 1431 aaPredicted RBP21.87■■□□□ 1.09
ACTN4-203ENST00000424234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.86■■□□□ 1.09
ACTN4-203ENST00000424234 NPM1P06748 294 aaKnown RBP eCLIP21.86■■□□□ 1.09
ACTN4-203ENST00000424234 HNRNPUL2Q1KMD3 747 aaKnown RBP21.86■■□□□ 1.09
ACTN4-203ENST00000424234 DIP2BQ9P265 1576 aa21.86■■□□□ 1.09
ACTN4-203ENST00000424234 TTC37Q6PGP7 1564 aa21.84■■□□□ 1.09
ACTN4-203ENST00000424234 APLP2Q06481 763 aa21.83■■□□□ 1.09
ACTN4-203ENST00000424234 CDC42BPAQ5VT25 1732 aa21.83■■□□□ 1.08
ACTN4-203ENST00000424234 MYO5CQ9NQX4 1742 aa21.82■■□□□ 1.08
ACTN4-203ENST00000424234 MTUS2Q5JR59 1369 aa21.82■■□□□ 1.08
ACTN4-203ENST00000424234 ABCA9Q8IUA7 1624 aa21.82■■□□□ 1.08
ACTN4-203ENST00000424234 CDK11AQ9UQ88 783 aaPredicted RBP21.8■■□□□ 1.08
ACTN4-203ENST00000424234 KANK4Q5T7N3 995 aaPredicted RBP21.79■■□□□ 1.08
ACTN4-203ENST00000424234 ITSN2Q9NZM3 1697 aa21.79■■□□□ 1.08
ACTN4-203ENST00000424234 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.79■■□□□ 1.081e-6■■□□□ 13.8
ACTN4-203ENST00000424234 GLI2P10070 1586 aa21.78■■□□□ 1.08
ACTN4-203ENST00000424234 PLEKHD1A6NEE1 506 aa21.78■■□□□ 1.08
ACTN4-203ENST00000424234 MAP3K4Q9Y6R4 1608 aa21.77■■□□□ 1.08
ACTN4-203ENST00000424234 CDC42BPBQ9Y5S2 1711 aa21.76■■□□□ 1.07
ACTN4-203ENST00000424234 PREX2Q70Z35 1606 aa21.76■■□□□ 1.07
ACTN4-203ENST00000424234 TSPOAP1O95153 1857 aa21.75■■□□□ 1.07
ACTN4-203ENST00000424234 NCOA2Q15596 1464 aa21.75■■□□□ 1.07
ACTN4-203ENST00000424234 ABCC10Q5T3U5 1492 aa21.75■■□□□ 1.07
ACTN4-203ENST00000424234 PPRC1Q5VV67 1664 aaKnown RBP21.72■■□□□ 1.07
ACTN4-203ENST00000424234 PPARGC1BQ86YN6 1023 aaKnown RBP21.68■■□□□ 1.06
ACTN4-203ENST00000424234 KCNH8Q96L42 1107 aa21.66■■□□□ 1.06
ACTN4-203ENST00000424234 ARAP3Q8WWN8 1544 aa21.64■■□□□ 1.05
ACTN4-203ENST00000424234 PHLDB1Q86UU1 1377 aa21.63■■□□□ 1.05
ACTN4-203ENST00000424234 GPATCH8Q9UKJ3 1502 aaKnown RBP21.62■■□□□ 1.05
ACTN4-203ENST00000424234 CFAP74Q9C0B2 1584 aa21.62■■□□□ 1.05
ACTN4-203ENST00000424234 MYOM3Q5VTT5 1437 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms