RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 PDS5BQ9NTI5 1447 aa21.13■□□□□ 0.97
SHISA9-201ENST00000423335 CHGAP10645 457 aaKnown RBP21.07■□□□□ 0.96
SHISA9-201ENST00000423335 PLEKHD1A6NEE1 506 aa21.07■□□□□ 0.96
SHISA9-201ENST00000423335 EIF4G1Q04637 1599 aaKnown RBP21.05■□□□□ 0.96
SHISA9-201ENST00000423335 KANK4Q5T7N3 995 aaPredicted RBP21.04■□□□□ 0.96
SHISA9-201ENST00000423335 TSPY4P0CV99 314 aa21.03■□□□□ 0.96
SHISA9-201ENST00000423335 TSPY10P0CW01 314 aa21.03■□□□□ 0.96
SHISA9-201ENST00000423335 FANCD2Q9BXW9 1451 aa20.97■□□□□ 0.95
SHISA9-201ENST00000423335 CFDP1Q9UEE9 299 aaPredicted RBP20.95■□□□□ 0.94
SHISA9-201ENST00000423335 KDM2AQ9Y2K7 1162 aa20.94■□□□□ 0.94
SHISA9-201ENST00000423335 NESP48681 1621 aa20.94■□□□□ 0.94
SHISA9-201ENST00000423335 RAPGEF2Q9Y4G8 1499 aa20.91■□□□□ 0.94
SHISA9-201ENST00000423335 NCAPD3P42695 1498 aa20.91■□□□□ 0.94
SHISA9-201ENST00000423335 HNRNPUQ00839 825 aaKnown RBP eCLIP20.9■□□□□ 0.94
SHISA9-201ENST00000423335 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
SHISA9-201ENST00000423335 IRX6P78412 446 aaPredicted RBP20.87■□□□□ 0.93
SHISA9-201ENST00000423335 TONSLQ96HA7 1378 aa20.86■□□□□ 0.93
SHISA9-201ENST00000423335 ESF1Q9H501 851 aaKnown RBP20.86■□□□□ 0.93
SHISA9-201ENST00000423335 BICRAQ9NZM4 1560 aa20.85■□□□□ 0.93
SHISA9-201ENST00000423335 RGL3Q3MIN7 710 aa20.82■□□□□ 0.92
SHISA9-201ENST00000423335 DAXXQ9UER7 740 aaPredicted RBP20.81■□□□□ 0.92
SHISA9-201ENST00000423335 SIN3AQ96ST3 1273 aa20.81■□□□□ 0.92
SHISA9-201ENST00000423335 STAG3Q9UJ98 1225 aa20.81■□□□□ 0.92
SHISA9-201ENST00000423335 FAM9BQ8IZU0 186 aa20.79■□□□□ 0.92
SHISA9-201ENST00000423335 FHOD3Q2V2M9 1422 aa20.78■□□□□ 0.92
SHISA9-201ENST00000423335 JPH4Q96JJ6 628 aa20.78■□□□□ 0.92
SHISA9-201ENST00000423335 RTL5Q5HYW3 569 aaPredicted RBP20.77■□□□□ 0.92
SHISA9-201ENST00000423335 CC2D2AQ9P2K1 1620 aa20.76■□□□□ 0.91
SHISA9-201ENST00000423335 CLSPNQ9HAW4 1339 aa20.75■□□□□ 0.91
SHISA9-201ENST00000423335 FGD5Q6ZNL6 1462 aa20.74■□□□□ 0.91
SHISA9-201ENST00000423335 SUPT16HQ9Y5B9 1047 aaKnown RBP20.73■□□□□ 0.91
SHISA9-201ENST00000423335 VPS8Q8N3P4 1428 aa20.72■□□□□ 0.91
SHISA9-201ENST00000423335 AQRO60306 1485 aaKnown RBP eCLIP20.72■□□□□ 0.91
SHISA9-201ENST00000423335 IGF1RP08069 1367 aa20.71■□□□□ 0.91
SHISA9-201ENST00000423335 SENP3-EIF4A1A0A087X0R7 540 aa20.7■□□□□ 0.9
SHISA9-201ENST00000423335 TRHP20396 242 aaPredicted RBP20.67■□□□□ 0.9
SHISA9-201ENST00000423335 FOXD1Q16676 465 aa20.67■□□□□ 0.9
SHISA9-201ENST00000423335 FHAD1B1AJZ9 1412 aa20.66■□□□□ 0.9
SHISA9-201ENST00000423335 CCNB3Q8WWL7 1395 aa20.66■□□□□ 0.9
SHISA9-201ENST00000423335 SALL2Q9Y467 1007 aaPredicted RBP20.63■□□□□ 0.89
SHISA9-201ENST00000423335 MLECQ14165 292 aa20.62■□□□□ 0.89
SHISA9-201ENST00000423335 ARID4BQ4LE39 1312 aaPredicted RBP20.61■□□□□ 0.89
SHISA9-201ENST00000423335 NPM2Q86SE8 214 aaKnown RBP20.61■□□□□ 0.89
SHISA9-201ENST00000423335 CFTRP13569 1480 aa20.59■□□□□ 0.89
SHISA9-201ENST00000423335 CYB5RLQ6IPT4 315 aa20.59■□□□□ 0.89
SHISA9-201ENST00000423335 GAPVD1Q14C86 1478 aa20.56■□□□□ 0.88
SHISA9-201ENST00000423335 MRS2Q9HD23 443 aa20.56■□□□□ 0.88
SHISA9-201ENST00000423335 CARMIL2Q6F5E8 1435 aa20.54■□□□□ 0.88
SHISA9-201ENST00000423335 PLEKHG5O94827 1062 aa20.54■□□□□ 0.88
SHISA9-201ENST00000423335 SYNJ1O43426 1573 aa20.54■□□□□ 0.88
SHISA9-201ENST00000423335 HNRNPMP52272 730 aaKnown RBP eCLIP20.52■□□□□ 0.88
SHISA9-201ENST00000423335 NBR1Q14596 966 aa20.51■□□□□ 0.87
SHISA9-201ENST00000423335 GGT6Q6P531 493 aa20.5■□□□□ 0.87
SHISA9-201ENST00000423335 ANP32EQ9BTT0 268 aa20.49■□□□□ 0.87
SHISA9-201ENST00000423335 UNC13AQ9UPW8 1703 aa20.48■□□□□ 0.87
SHISA9-201ENST00000423335 ANP32AP39687 249 aaKnown RBP20.46■□□□□ 0.87
SHISA9-201ENST00000423335 FMN1Q68DA7 1419 aa20.46■□□□□ 0.87
SHISA9-201ENST00000423335 SLC24A1O60721 1099 aa20.44■□□□□ 0.86
SHISA9-201ENST00000423335 CCDC136Q96JN2 1154 aa20.43■□□□□ 0.86
SHISA9-201ENST00000423335 BCL11AQ9H165 835 aa20.42■□□□□ 0.86
SHISA9-201ENST00000423335 OSCARQ8IYS5 282 aa20.41■□□□□ 0.86
SHISA9-201ENST00000423335 EIF4G2P78344 907 aaKnown RBP eCLIP20.41■□□□□ 0.86
SHISA9-201ENST00000423335 CUX1P39880 1505 aa20.4■□□□□ 0.86
SHISA9-201ENST00000423335 ARHGAP35Q9NRY4 1499 aa20.4■□□□□ 0.86
SHISA9-201ENST00000423335 TMC1Q8TDI8 760 aa20.38■□□□□ 0.85
SHISA9-201ENST00000423335 HMGXB3Q12766 1538 aa20.37■□□□□ 0.85
SHISA9-201ENST00000423335 PTPRGP23470 1445 aa20.37■□□□□ 0.85
SHISA9-201ENST00000423335 POLA1P09884 1462 aaPredicted RBP20.37■□□□□ 0.85
SHISA9-201ENST00000423335 PPP1R15AO75807 674 aaPredicted RBP20.37■□□□□ 0.85
SHISA9-201ENST00000423335 PKD2Q13563 968 aa20.37■□□□□ 0.85
SHISA9-201ENST00000423335 ZNF644Q9H582 1327 aaPredicted RBP20.37■□□□□ 0.85
SHISA9-201ENST00000423335 TOPBP1Q92547 1522 aa20.36■□□□□ 0.85
SHISA9-201ENST00000423335 RAB3GAP2Q9H2M9 1393 aa20.35■□□□□ 0.85
SHISA9-201ENST00000423335 DCAF11Q8TEB1 546 aa20.35■□□□□ 0.85
SHISA9-201ENST00000423335 TSHZ2Q9NRE2 1034 aa20.35■□□□□ 0.85
SHISA9-201ENST00000423335 EFCAB2Q5VUJ9 269 aa20.35■□□□□ 0.85
SHISA9-201ENST00000423335 CARD11Q9BXL7 1154 aa20.31■□□□□ 0.84
SHISA9-201ENST00000423335 SETD5Q9C0A6 1442 aa20.29■□□□□ 0.84
SHISA9-201ENST00000423335 KIF3BO15066 747 aa20.29■□□□□ 0.84
SHISA9-201ENST00000423335 RBM19Q9Y4C8 960 aaKnown RBP20.29■□□□□ 0.84
SHISA9-201ENST00000423335 B4GALNT3Q6L9W6 998 aa20.28■□□□□ 0.84
SHISA9-201ENST00000423335 MPHOSPH9Q99550 1183 aa20.26■□□□□ 0.83
SHISA9-201ENST00000423335 SAFB2Q14151 953 aaKnown RBP eCLIP20.26■□□□□ 0.83
SHISA9-201ENST00000423335 NUP155O75694 1391 aa20.25■□□□□ 0.83
SHISA9-201ENST00000423335 DHX57Q6P158 1386 aaKnown RBP20.25■□□□□ 0.83
SHISA9-201ENST00000423335 ZBTB47Q9UFB7 747 aaPredicted RBP20.24■□□□□ 0.83
SHISA9-201ENST00000423335 ARAP1Q96P48 1450 aa20.23■□□□□ 0.83
SHISA9-201ENST00000423335 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
SHISA9-201ENST00000423335 MRC2Q9UBG0 1479 aa20.22■□□□□ 0.83
SHISA9-201ENST00000423335 GRIN2BQ13224 1484 aa20.2■□□□□ 0.82
SHISA9-201ENST00000423335 CANXP27824 592 aaKnown RBP20.19■□□□□ 0.82
SHISA9-201ENST00000423335 C14orf37Q86TY3 774 aa20.18■□□□□ 0.82
SHISA9-201ENST00000423335 SPAG9O60271 1321 aaKnown RBP20.17■□□□□ 0.82
SHISA9-201ENST00000423335 KIF21BO75037 1637 aa20.17■□□□□ 0.82
SHISA9-201ENST00000423335 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
SHISA9-201ENST00000423335 PHLDB1Q86UU1 1377 aa20.15■□□□□ 0.82
SHISA9-201ENST00000423335 PRXQ9BXM0 1461 aa20.15■□□□□ 0.82
SHISA9-201ENST00000423335 TNNT2P45379 298 aaPredicted RBP20.14■□□□□ 0.82
SHISA9-201ENST00000423335 ZBTB7CA1YPR0 619 aa20.14■□□□□ 0.81
SHISA9-201ENST00000423335 STK26Q9P289 416 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms