RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 JPH4Q96JJ6 628 aa32.9■■■□□ 2.86
AC004540.1-203ENST00000421862 KIF27Q86VH2 1401 aa32.9■■■□□ 2.86
AC004540.1-203ENST00000421862 KIAA0586Q9BVV6 1533 aa32.86■■■□□ 2.85
AC004540.1-203ENST00000421862 IGF1RP08069 1367 aa32.85■■■□□ 2.85
AC004540.1-203ENST00000421862 ADCY10Q96PN6 1610 aa32.83■■■□□ 2.85
AC004540.1-203ENST00000421862 MAPKBP1O60336 1514 aa32.81■■■□□ 2.84
AC004540.1-203ENST00000421862 DIP2BQ9P265 1576 aa32.71■■■□□ 2.83
AC004540.1-203ENST00000421862 ABCC10Q5T3U5 1492 aa32.69■■■□□ 2.82
AC004540.1-203ENST00000421862 CARMIL1Q5VZK9 1371 aa32.62■■■□□ 2.81
AC004540.1-203ENST00000421862 IQGAP2Q13576 1575 aa32.61■■■□□ 2.81
AC004540.1-203ENST00000421862 NPM1P06748 294 aaKnown RBP eCLIP32.5■■■□□ 2.79
AC004540.1-203ENST00000421862 CARMIL2Q6F5E8 1435 aa32.46■■■□□ 2.79
AC004540.1-203ENST00000421862 FAM69CQ0P6D2 419 aa32.46■■■□□ 2.79
AC004540.1-203ENST00000421862 PTPRGP23470 1445 aa32.45■■■□□ 2.79
AC004540.1-203ENST00000421862 TNIKQ9UKE5 1360 aa32.45■■■□□ 2.78
AC004540.1-203ENST00000421862 ABCC2Q92887 1545 aa32.43■■■□□ 2.78
AC004540.1-203ENST00000421862 DISP1Q96F81 1524 aa32.43■■■□□ 2.78
AC004540.1-203ENST00000421862 AEBP2Q6ZN18 517 aaPredicted RBP32.43■■■□□ 2.78
AC004540.1-203ENST00000421862 TSPOAP1O95153 1857 aa32.42■■■□□ 2.78
AC004540.1-203ENST00000421862 RAPGEF2Q9Y4G8 1499 aa32.4■■■□□ 2.78
AC004540.1-203ENST00000421862 UGGT2Q9NYU1 1516 aa32.4■■■□□ 2.78
AC004540.1-203ENST00000421862 UHRF1BP1LA0JNW5 1464 aa32.39■■■□□ 2.78
AC004540.1-203ENST00000421862 KDM6BO15054 1643 aa32.39■■■□□ 2.78
AC004540.1-203ENST00000421862 CTTNBP2Q8WZ74 1663 aa32.36■■■□□ 2.77
AC004540.1-203ENST00000421862 KIAA0556O60303 1618 aa32.35■■■□□ 2.77
AC004540.1-203ENST00000421862 PPRC1Q5VV67 1664 aaKnown RBP32.33■■■□□ 2.77
AC004540.1-203ENST00000421862 GLI2P10070 1586 aa32.32■■■□□ 2.76
AC004540.1-203ENST00000421862 UACAQ9BZF9 1416 aa32.27■■■□□ 2.76
AC004540.1-203ENST00000421862 PLB1Q6P1J6 1458 aa32.27■■■□□ 2.76
AC004540.1-203ENST00000421862 ASXL2Q76L83 1435 aa32.26■■■□□ 2.76
AC004540.1-203ENST00000421862 KDM5BQ9UGL1 1544 aa32.24■■■□□ 2.75
AC004540.1-203ENST00000421862 ZCCHC11Q5TAX3 1644 aaKnown RBP32.23■■■□□ 2.75
AC004540.1-203ENST00000421862 MAP3K4Q9Y6R4 1608 aa32.18■■■□□ 2.74
AC004540.1-203ENST00000421862 TTBK1Q5TCY1 1321 aaPredicted RBP32.17■■■□□ 2.74
AC004540.1-203ENST00000421862 EPRSP07814 1512 aaKnown RBP32.11■■■□□ 2.73
AC004540.1-203ENST00000421862 PRXQ9BXM0 1461 aa32.1■■■□□ 2.73
AC004540.1-203ENST00000421862 GOLGA3Q08378 1498 aa32.05■■■□□ 2.72
AC004540.1-203ENST00000421862 ABCA8O94911 1581 aa32.04■■■□□ 2.72
AC004540.1-203ENST00000421862 WDR7Q9Y4E6 1490 aa31.99■■■□□ 2.71
AC004540.1-203ENST00000421862 TEX14Q8IWB6 1497 aa31.97■■■□□ 2.71
AC004540.1-203ENST00000421862 CFAP43Q8NDM7 1665 aa31.94■■■□□ 2.7
AC004540.1-203ENST00000421862 COL17A1Q9UMD9 1497 aaPredicted RBP31.91■■■□□ 2.7
AC004540.1-203ENST00000421862 KDM4FA0A1W2PPD8 638 aa31.9■■■□□ 2.7
AC004540.1-203ENST00000421862 SAMD9Q5K651 1589 aa31.85■■■□□ 2.69
AC004540.1-203ENST00000421862 MAGI3Q5TCQ9 1506 aa31.81■■■□□ 2.68
AC004540.1-203ENST00000421862 ADGRL1O94910 1474 aa31.77■■■□□ 2.68
AC004540.1-203ENST00000421862 CD109Q6YHK3 1445 aa31.7■■■□□ 2.67
AC004540.1-203ENST00000421862 RAPGEF6Q8TEU7 1601 aa31.68■■■□□ 2.66
AC004540.1-203ENST00000421862 EEA1Q15075 1411 aa31.67■■■□□ 2.66
AC004540.1-203ENST00000421862 ABCA9Q8IUA7 1624 aa31.66■■■□□ 2.66
AC004540.1-203ENST00000421862 ATP10BO94823 1461 aa31.65■■■□□ 2.66
AC004540.1-203ENST00000421862 CSRNP3Q8WYN3 585 aa31.62■■■□□ 2.65
AC004540.1-203ENST00000421862 ARAP3Q8WWN8 1544 aa31.56■■■□□ 2.64
AC004540.1-203ENST00000421862 KIF21BO75037 1637 aa31.54■■■□□ 2.64
AC004540.1-203ENST00000421862 KCNH8Q96L42 1107 aa31.54■■■□□ 2.64
AC004540.1-203ENST00000421862 P3H3Q8IVL6 736 aa31.51■■■□□ 2.63
AC004540.1-203ENST00000421862 NUP153P49790 1475 aaKnown RBP31.51■■■□□ 2.63
AC004540.1-203ENST00000421862 FAM9AQ8IZU1 332 aaPredicted RBP31.47■■■□□ 2.63
AC004540.1-203ENST00000421862 EFCAB5A4FU69 1503 aa31.46■■■□□ 2.63
AC004540.1-203ENST00000421862 FHOD3Q2V2M9 1422 aa31.43■■■□□ 2.62
AC004540.1-203ENST00000421862 ARID3CA6NKF2 412 aa31.43■■■□□ 2.62
AC004540.1-203ENST00000421862 HECW2Q9P2P5 1572 aa31.41■■■□□ 2.62
AC004540.1-203ENST00000421862 PHLDB1Q86UU1 1377 aa31.41■■■□□ 2.62
AC004540.1-203ENST00000421862 NEO1Q92859 1461 aa31.4■■■□□ 2.62
AC004540.1-203ENST00000421862 FRMPD1Q5SYB0 1578 aa31.4■■■□□ 2.62
AC004540.1-203ENST00000421862 CFAP74Q9C0B2 1584 aa31.3■■■□□ 2.6
AC004540.1-203ENST00000421862 RICTORQ6R327 1708 aa31.29■■■□□ 2.6
AC004540.1-203ENST00000421862 ADAMTSL3P82987 1691 aa31.29■■■□□ 2.6
AC004540.1-203ENST00000421862 TTC37Q6PGP7 1564 aa31.26■■■□□ 2.59
AC004540.1-203ENST00000421862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.25■■■□□ 2.59
AC004540.1-203ENST00000421862 ARHGEF40Q8TER5 1519 aa31.24■■■□□ 2.59
AC004540.1-203ENST00000421862 BCORL1Q5H9F3 1711 aa31.22■■■□□ 2.59
AC004540.1-203ENST00000421862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.19■■■□□ 2.58
AC004540.1-203ENST00000421862 HNRNPUL2Q1KMD3 747 aaKnown RBP31.19■■■□□ 2.58
AC004540.1-203ENST00000421862 RANGAP1P46060 587 aaPredicted RBP31.18■■■□□ 2.58
AC004540.1-203ENST00000421862 CDK13Q14004 1512 aaKnown RBP31.18■■■□□ 2.58
AC004540.1-203ENST00000421862 RAPGEF3O95398 923 aa31.16■■■□□ 2.58
AC004540.1-203ENST00000421862 HECW1Q76N89 1606 aa31.16■■■□□ 2.58
AC004540.1-203ENST00000421862 ZMYM4Q5VZL5 1548 aa31.15■■■□□ 2.58
AC004540.1-203ENST00000421862 FANCAO15360 1455 aa31.14■■■□□ 2.58
AC004540.1-203ENST00000421862 PLEKHD1A6NEE1 506 aa31.12■■■□□ 2.57
AC004540.1-203ENST00000421862 MADDQ8WXG6 1647 aa31.12■■■□□ 2.57
AC004540.1-203ENST00000421862 DENND4BO75064 1496 aaPredicted RBP31.11■■■□□ 2.57
AC004540.1-203ENST00000421862 AKNAQ7Z591 1439 aa31.11■■■□□ 2.57
AC004540.1-203ENST00000421862 PTPRMP28827 1452 aa31.1■■■□□ 2.57
AC004540.1-203ENST00000421862 ARHGAP35Q9NRY4 1499 aa31.09■■■□□ 2.57
AC004540.1-203ENST00000421862 MYO5CQ9NQX4 1742 aa31.07■■■□□ 2.56
AC004540.1-203ENST00000421862 FMN1Q68DA7 1419 aa31.07■■■□□ 2.56
AC004540.1-203ENST00000421862 LRRIQ1Q96JM4 1722 aa31.06■■■□□ 2.56
AC004540.1-203ENST00000421862 SIGLEC1Q9BZZ2 1709 aa31.05■■■□□ 2.56
AC004540.1-203ENST00000421862 RIMS1Q86UR5 1692 aaKnown RBP31■■■□□ 2.55
AC004540.1-203ENST00000421862 ZFYVE16Q7Z3T8 1539 aa31■■■□□ 2.55
AC004540.1-203ENST00000421862 KIF14Q15058 1648 aa30.98■■■□□ 2.55
AC004540.1-203ENST00000421862 MAGI2Q86UL8 1455 aa30.97■■■□□ 2.55
AC004540.1-203ENST00000421862 PLCH2O75038 1416 aa30.97■■■□□ 2.55
AC004540.1-203ENST00000421862 CHIC1Q5VXU3 224 aa30.96■■■□□ 2.55
AC004540.1-203ENST00000421862 POGZQ7Z3K3 1410 aa30.95■■■□□ 2.54
AC004540.1-203ENST00000421862 ILDR1Q86SU0 546 aaPredicted RBP30.94■■■□□ 2.54
AC004540.1-203ENST00000421862 UBTFP17480 764 aaKnown RBP30.92■■■□□ 2.54
AC004540.1-203ENST00000421862 PCF11O94913 1555 aaKnown RBP30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms