RNA–Protein interactions for RNA: ENST00000421687.6

PABPC4-205, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 1,663 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-205ENST00000421687 UBTFP17480 764 aaKnown RBP22.87■■□□□ 1.25
PABPC4-205ENST00000421687 CLASP1Q7Z460 1538 aa22.85■■□□□ 1.25
PABPC4-205ENST00000421687 CTTNBP2Q8WZ74 1663 aa22.84■■□□□ 1.25
PABPC4-205ENST00000421687 LOC105371045A0A1W2PR82 267 aa22.81■■□□□ 1.24
PABPC4-205ENST00000421687 IQGAP2Q13576 1575 aa22.81■■□□□ 1.24
PABPC4-205ENST00000421687 TNIKQ9UKE5 1360 aa22.77■■□□□ 1.24
PABPC4-205ENST00000421687 JPH4Q96JJ6 628 aa22.74■■□□□ 1.23
PABPC4-205ENST00000421687 SHROOM2Q13796 1616 aa22.73■■□□□ 1.23
PABPC4-205ENST00000421687 UGGT2Q9NYU1 1516 aa22.69■■□□□ 1.22
PABPC4-205ENST00000421687 PRG4Q92954 1404 aaPredicted RBP22.66■■□□□ 1.22
PABPC4-205ENST00000421687 RANGAP1P46060 587 aaPredicted RBP22.63■■□□□ 1.21
PABPC4-205ENST00000421687 CARMIL2Q6F5E8 1435 aa22.62■■□□□ 1.21
PABPC4-205ENST00000421687 DISP1Q96F81 1524 aa22.61■■□□□ 1.21
PABPC4-205ENST00000421687 EFCAB5A4FU69 1503 aa22.59■■□□□ 1.21
PABPC4-205ENST00000421687 SAMD9Q5K651 1589 aa22.58■■□□□ 1.21
PABPC4-205ENST00000421687 CEP162Q5TB80 1403 aa22.58■■□□□ 1.2
PABPC4-205ENST00000421687 KIAA0556O60303 1618 aa22.57■■□□□ 1.2
PABPC4-205ENST00000421687 ARHGEF11O15085 1522 aa22.57■■□□□ 1.2
PABPC4-205ENST00000421687 CLIP1P30622 1438 aa22.56■■□□□ 1.2
PABPC4-205ENST00000421687 ERCC6L2Q5T890 1561 aa22.56■■□□□ 1.2
PABPC4-205ENST00000421687 DNAJC5Q9H3Z4 198 aa22.55■■□□□ 1.2
PABPC4-205ENST00000421687 ARHGAP35Q9NRY4 1499 aa22.54■■□□□ 1.2
PABPC4-205ENST00000421687 P3H3Q8IVL6 736 aa22.51■■□□□ 1.19
PABPC4-205ENST00000421687 RIMBP3CA6NJZ7 1639 aa22.5■■□□□ 1.19
PABPC4-205ENST00000421687 RIMBP3BA6NNM3 1639 aa22.5■■□□□ 1.19
PABPC4-205ENST00000421687 RIMBP3Q9UFD9 1639 aa22.5■■□□□ 1.19
PABPC4-205ENST00000421687 FHOD3Q2V2M9 1422 aa22.47■■□□□ 1.19
PABPC4-205ENST00000421687 PTPRGP23470 1445 aa22.45■■□□□ 1.18
PABPC4-205ENST00000421687 ARAP1Q96P48 1450 aa22.43■■□□□ 1.18
PABPC4-205ENST00000421687 TTBK1Q5TCY1 1321 aaPredicted RBP22.41■■□□□ 1.18
PABPC4-205ENST00000421687 FMN1Q68DA7 1419 aa22.39■■□□□ 1.17
PABPC4-205ENST00000421687 CYB5RLQ6IPT4 315 aa22.34■■□□□ 1.17
PABPC4-205ENST00000421687 UACAQ9BZF9 1416 aa22.32■■□□□ 1.16
PABPC4-205ENST00000421687 PLB1Q6P1J6 1458 aa22.31■■□□□ 1.16
PABPC4-205ENST00000421687 ABCA8O94911 1581 aa22.29■■□□□ 1.16
PABPC4-205ENST00000421687 VPS8Q8N3P4 1428 aa22.28■■□□□ 1.16
PABPC4-205ENST00000421687 UHRF1BP1LA0JNW5 1464 aa22.27■■□□□ 1.16
PABPC4-205ENST00000421687 RAPGEF6Q8TEU7 1601 aa22.27■■□□□ 1.16
PABPC4-205ENST00000421687 ABCC2Q92887 1545 aa22.26■■□□□ 1.15
PABPC4-205ENST00000421687 CASKIN1Q8WXD9 1431 aa22.25■■□□□ 1.15
PABPC4-205ENST00000421687 ADCY10Q96PN6 1610 aa22.23■■□□□ 1.15
PABPC4-205ENST00000421687 FYCO1Q9BQS8 1478 aa22.23■■□□□ 1.15
PABPC4-205ENST00000421687 PCF11O94913 1555 aaKnown RBP22.23■■□□□ 1.15
PABPC4-205ENST00000421687 HECW1Q76N89 1606 aa22.21■■□□□ 1.15
PABPC4-205ENST00000421687 NUP153P49790 1475 aaKnown RBP22.2■■□□□ 1.14
PABPC4-205ENST00000421687 ATP1B4Q9UN42 357 aaPredicted RBP22.19■■□□□ 1.14
PABPC4-205ENST00000421687 KDM5BQ9UGL1 1544 aa22.16■■□□□ 1.14
PABPC4-205ENST00000421687 NPM1P06748 294 aaKnown RBP eCLIP22.14■■□□□ 1.13
PABPC4-205ENST00000421687 ATP10BO94823 1461 aa22.13■■□□□ 1.13
PABPC4-205ENST00000421687 EPRSP07814 1512 aaKnown RBP22.13■■□□□ 1.13
PABPC4-205ENST00000421687 CCDC18Q5T9S5 1454 aa22.12■■□□□ 1.13
PABPC4-205ENST00000421687 ARID3CA6NKF2 412 aa22.11■■□□□ 1.13
PABPC4-205ENST00000421687 ZCCHC11Q5TAX3 1644 aaKnown RBP22.1■■□□□ 1.13
PABPC4-205ENST00000421687 LRRIQ1Q96JM4 1722 aa22.09■■□□□ 1.13
PABPC4-205ENST00000421687 CDK13Q14004 1512 aaKnown RBP22.08■■□□□ 1.13
PABPC4-205ENST00000421687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.07■■□□□ 1.12
PABPC4-205ENST00000421687 HNRNPUL2Q1KMD3 747 aaKnown RBP22.07■■□□□ 1.12
PABPC4-205ENST00000421687 APLP2Q06481 763 aa22.04■■□□□ 1.12
PABPC4-205ENST00000421687 MAP3K1Q13233 1512 aa22.03■■□□□ 1.12
PABPC4-205ENST00000421687 CDK11AQ9UQ88 783 aaPredicted RBP22.03■■□□□ 1.12
PABPC4-205ENST00000421687 MAPKBP1O60336 1514 aa22.02■■□□□ 1.12
PABPC4-205ENST00000421687 TIAM1Q13009 1591 aa22.02■■□□□ 1.12
PABPC4-205ENST00000421687 CFAP43Q8NDM7 1665 aa22.01■■□□□ 1.11
PABPC4-205ENST00000421687 PLEKHD1A6NEE1 506 aa22■■□□□ 1.11
PABPC4-205ENST00000421687 ASXL2Q76L83 1435 aa22■■□□□ 1.11
PABPC4-205ENST00000421687 WDR7Q9Y4E6 1490 aa21.96■■□□□ 1.11
PABPC4-205ENST00000421687 TROQ12816 1431 aaPredicted RBP21.93■■□□□ 1.1
PABPC4-205ENST00000421687 MTUS2Q5JR59 1369 aa21.93■■□□□ 1.1
PABPC4-205ENST00000421687 MAGI3Q5TCQ9 1506 aa21.92■■□□□ 1.1
PABPC4-205ENST00000421687 LRRC9Q6ZRR7 1453 aa21.92■■□□□ 1.1
PABPC4-205ENST00000421687 KANK4Q5T7N3 995 aaPredicted RBP21.9■■□□□ 1.1
PABPC4-205ENST00000421687 EHBP1L1Q8N3D4 1523 aa21.9■■□□□ 1.1
PABPC4-205ENST00000421687 KCNH8Q96L42 1107 aa21.88■■□□□ 1.09
PABPC4-205ENST00000421687 ABCC10Q5T3U5 1492 aa21.85■■□□□ 1.09
PABPC4-205ENST00000421687 KIF14Q15058 1648 aa21.84■■□□□ 1.09
PABPC4-205ENST00000421687 DIP2BQ9P265 1576 aa21.82■■□□□ 1.08
PABPC4-205ENST00000421687 SUPT6HQ7KZ85 1726 aaKnown RBP21.8■■□□□ 1.08
PABPC4-205ENST00000421687 GLI2P10070 1586 aa21.8■■□□□ 1.08
PABPC4-205ENST00000421687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.79■■□□□ 1.08
PABPC4-205ENST00000421687 FAM69CQ0P6D2 419 aa21.79■■□□□ 1.08
PABPC4-205ENST00000421687 ABCA9Q8IUA7 1624 aa21.78■■□□□ 1.08
PABPC4-205ENST00000421687 NCOA2Q15596 1464 aa21.77■■□□□ 1.08
PABPC4-205ENST00000421687 PPARGC1BQ86YN6 1023 aaKnown RBP21.77■■□□□ 1.08
PABPC4-205ENST00000421687 TTC37Q6PGP7 1564 aa21.75■■□□□ 1.07
PABPC4-205ENST00000421687 KIF13AQ9H1H9 1805 aa21.75■■□□□ 1.07
PABPC4-205ENST00000421687 TRHP20396 242 aaPredicted RBP21.72■■□□□ 1.07
PABPC4-205ENST00000421687 CCNB3Q8WWL7 1395 aa21.72■■□□□ 1.07
PABPC4-205ENST00000421687 MAP3K4Q9Y6R4 1608 aa21.72■■□□□ 1.07
PABPC4-205ENST00000421687 CD109Q6YHK3 1445 aa21.71■■□□□ 1.07
PABPC4-205ENST00000421687 GPATCH8Q9UKJ3 1502 aaKnown RBP21.68■■□□□ 1.06
PABPC4-205ENST00000421687 PLCH2O75038 1416 aa21.68■■□□□ 1.06
PABPC4-205ENST00000421687 MYO5CQ9NQX4 1742 aa21.68■■□□□ 1.06
PABPC4-205ENST00000421687 PHLDB1Q86UU1 1377 aa21.66■■□□□ 1.06
PABPC4-205ENST00000421687 ARAP3Q8WWN8 1544 aa21.66■■□□□ 1.06
PABPC4-205ENST00000421687 CDC42BPAQ5VT25 1732 aa21.66■■□□□ 1.06
PABPC4-205ENST00000421687 MYOM3Q5VTT5 1437 aa21.65■■□□□ 1.06
PABPC4-205ENST00000421687 PREX2Q70Z35 1606 aa21.65■■□□□ 1.06
PABPC4-205ENST00000421687 ITSN2Q9NZM3 1697 aa21.65■■□□□ 1.06
PABPC4-205ENST00000421687 CFDP1Q9UEE9 299 aaPredicted RBP21.63■■□□□ 1.05
PABPC4-205ENST00000421687 CDC42BPBQ9Y5S2 1711 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms