RNA–Protein interactions for RNA: ENST00000421687.6

PABPC4-205, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 1,663 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-205ENST00000421687 NISCHQ9Y2I1 1504 aa33.19■■■□□ 2.9
PABPC4-205ENST00000421687 CCDC180Q9P1Z9 1646 aa29.29■■■□□ 2.28
PABPC4-205ENST00000421687 ABCC9O60706 1549 aa28.19■■■□□ 2.1
PABPC4-205ENST00000421687 ZCCHC6Q5VYS8 1495 aaKnown RBP27.75■■■□□ 2.03
PABPC4-205ENST00000421687 DCAF8L2P0C7V8 631 aa27.54■■■□□ 2
PABPC4-205ENST00000421687 DCAF1Q9Y4B6 1507 aa27.5■■□□□ 1.99
PABPC4-205ENST00000421687 MYO15BQ96JP2 1530 aa27.44■■□□□ 1.98
PABPC4-205ENST00000421687 NACADO15069 1562 aa27.43■■□□□ 1.98
PABPC4-205ENST00000421687 RB1CC1Q8TDY2 1594 aa27.35■■□□□ 1.97
PABPC4-205ENST00000421687 SCRIBQ14160 1630 aa26.75■■□□□ 1.87
PABPC4-205ENST00000421687 UNC13AQ9UPW8 1703 aa26.69■■□□□ 1.86
PABPC4-205ENST00000421687 SHROOM4Q9ULL8 1493 aa26.5■■□□□ 1.83
PABPC4-205ENST00000421687 BICRAQ9NZM4 1560 aa26.48■■□□□ 1.83
PABPC4-205ENST00000421687 PABPN1Q86U42 306 aaKnown RBP eCLIP26.43■■□□□ 1.82
PABPC4-205ENST00000421687 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
PABPC4-205ENST00000421687 EIF4G1Q04637 1599 aaKnown RBP25.76■■□□□ 1.71
PABPC4-205ENST00000421687 BAZ1AQ9NRL2 1556 aaPredicted RBP25.7■■□□□ 1.7
PABPC4-205ENST00000421687 SMARCA4P51532 1647 aa25.64■■□□□ 1.7
PABPC4-205ENST00000421687 MROH2BQ7Z745 1585 aa25.58■■□□□ 1.69
PABPC4-205ENST00000421687 CC2D2AQ9P2K1 1620 aa25.53■■□□□ 1.68
PABPC4-205ENST00000421687 RSF1Q96T23 1441 aaPredicted RBP25.48■■□□□ 1.67
PABPC4-205ENST00000421687 DNAJC5BQ9UF47 199 aa25.43■■□□□ 1.66
PABPC4-205ENST00000421687 PEG3Q9GZU2 1588 aa25.4■■□□□ 1.66
PABPC4-205ENST00000421687 SMARCA2P51531 1590 aa25.39■■□□□ 1.66
PABPC4-205ENST00000421687 ATAD2BQ9ULI0 1458 aa25.39■■□□□ 1.66
PABPC4-205ENST00000421687 WIZO95785 1651 aa25.32■■□□□ 1.64
PABPC4-205ENST00000421687 NCAPD3P42695 1498 aa25.31■■□□□ 1.64
PABPC4-205ENST00000421687 HMGXB3Q12766 1538 aa25.23■■□□□ 1.63
PABPC4-205ENST00000421687 BAZ1BQ9UIG0 1483 aaKnown RBP25.21■■□□□ 1.63
PABPC4-205ENST00000421687 SUPT5HO00267 1087 aaKnown RBP25.2■■□□□ 1.62
PABPC4-205ENST00000421687 TOP2AP11388 1531 aaKnown RBP25.09■■□□□ 1.61
PABPC4-205ENST00000421687 CCDC88BA6NC98 1476 aa24.8■■□□□ 1.56
PABPC4-205ENST00000421687 CADPSQ9ULU8 1353 aa24.61■■□□□ 1.53
PABPC4-205ENST00000421687 LAMC3Q9Y6N6 1575 aa24.56■■□□□ 1.52
PABPC4-205ENST00000421687 CFTRP13569 1480 aa24.56■■□□□ 1.52
PABPC4-205ENST00000421687 NESP48681 1621 aa24.53■■□□□ 1.52
PABPC4-205ENST00000421687 PDS5BQ9NTI5 1447 aa24.39■■□□□ 1.49
PABPC4-205ENST00000421687 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
PABPC4-205ENST00000421687 FANCD2Q9BXW9 1451 aa24.31■■□□□ 1.48
PABPC4-205ENST00000421687 ERCC6Q03468 1493 aa24.27■■□□□ 1.48
PABPC4-205ENST00000421687 KIF21AQ7Z4S6 1674 aa24.25■■□□□ 1.47
PABPC4-205ENST00000421687 CEP164Q9UPV0 1460 aa24.24■■□□□ 1.47
PABPC4-205ENST00000421687 MRC2Q9UBG0 1479 aa24.1■■□□□ 1.45
PABPC4-205ENST00000421687 THOC2Q8NI27 1593 aaKnown RBP24.06■■□□□ 1.44
PABPC4-205ENST00000421687 URB2Q14146 1524 aaKnown RBP24.03■■□□□ 1.44
PABPC4-205ENST00000421687 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
PABPC4-205ENST00000421687 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
PABPC4-205ENST00000421687 WDR62O43379 1518 aa24■■□□□ 1.43
PABPC4-205ENST00000421687 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
PABPC4-205ENST00000421687 TOPBP1Q92547 1522 aa23.97■■□□□ 1.43
PABPC4-205ENST00000421687 CUX1P39880 1505 aa23.97■■□□□ 1.43
PABPC4-205ENST00000421687 SYNJ1O43426 1573 aa23.9■■□□□ 1.42
PABPC4-205ENST00000421687 TOP2BQ02880 1626 aa23.9■■□□□ 1.42
PABPC4-205ENST00000421687 BIVM-ERCC5R4GMW8 1640 aa23.88■■□□□ 1.41
PABPC4-205ENST00000421687 CUX2O14529 1486 aa23.85■■□□□ 1.41
PABPC4-205ENST00000421687 FGD5Q6ZNL6 1462 aa23.82■■□□□ 1.4
PABPC4-205ENST00000421687 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
PABPC4-205ENST00000421687 CHIC1Q5VXU3 224 aa23.79■■□□□ 1.4
PABPC4-205ENST00000421687 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
PABPC4-205ENST00000421687 SOGA1O94964 1423 aa23.72■■□□□ 1.39
PABPC4-205ENST00000421687 IFT140Q96RY7 1462 aa23.71■■□□□ 1.39
PABPC4-205ENST00000421687 RAD54L2Q9Y4B4 1467 aa23.69■■□□□ 1.38
PABPC4-205ENST00000421687 TARBP1Q13395 1621 aaKnown RBP23.67■■□□□ 1.38
PABPC4-205ENST00000421687 ABCA10Q8WWZ4 1543 aa23.62■■□□□ 1.37
PABPC4-205ENST00000421687 WDR97A6NE52 1622 aa23.58■■□□□ 1.37
PABPC4-205ENST00000421687 ZNF608Q9ULD9 1512 aaPredicted RBP23.55■■□□□ 1.36
PABPC4-205ENST00000421687 TDRD9Q8NDG6 1382 aaKnown RBP23.53■■□□□ 1.36
PABPC4-205ENST00000421687 AQRO60306 1485 aaKnown RBP eCLIP23.48■■□□□ 1.357e-8■■■■■ 33.4
PABPC4-205ENST00000421687 EIF4G3O43432 1585 aaKnown RBP23.48■■□□□ 1.35
PABPC4-205ENST00000421687 KIF27Q86VH2 1401 aa23.48■■□□□ 1.35
PABPC4-205ENST00000421687 ABCA5Q8WWZ7 1642 aa23.47■■□□□ 1.35
PABPC4-205ENST00000421687 GAPVD1Q14C86 1478 aa23.46■■□□□ 1.35
PABPC4-205ENST00000421687 GRIN2BQ13224 1484 aa23.39■■□□□ 1.34
PABPC4-205ENST00000421687 RUSC2Q8N2Y8 1516 aa23.38■■□□□ 1.33
PABPC4-205ENST00000421687 EEA1Q15075 1411 aa23.36■■□□□ 1.33
PABPC4-205ENST00000421687 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
PABPC4-205ENST00000421687 ERICH3Q5RHP9 1530 aa23.35■■□□□ 1.33
PABPC4-205ENST00000421687 IGF1RP08069 1367 aa23.32■■□□□ 1.32
PABPC4-205ENST00000421687 SNAPC4Q5SXM2 1469 aa23.28■■□□□ 1.32
PABPC4-205ENST00000421687 MAGI1Q96QZ7 1491 aaPredicted RBP23.28■■□□□ 1.32
PABPC4-205ENST00000421687 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
PABPC4-205ENST00000421687 CSRNP3Q8WYN3 585 aa23.25■■□□□ 1.31
PABPC4-205ENST00000421687 CUL7Q14999 1698 aa23.22■■□□□ 1.31
PABPC4-205ENST00000421687 FHAD1B1AJZ9 1412 aa23.21■■□□□ 1.31
PABPC4-205ENST00000421687 ADAMTS12P58397 1594 aa23.21■■□□□ 1.31
PABPC4-205ENST00000421687 CARMIL1Q5VZK9 1371 aa23.19■■□□□ 1.3
PABPC4-205ENST00000421687 SYNJ2O15056 1496 aa23.18■■□□□ 1.3
PABPC4-205ENST00000421687 PRXQ9BXM0 1461 aa23.15■■□□□ 1.3
PABPC4-205ENST00000421687 CHMP7Q8WUX9 453 aaPredicted RBP23.14■■□□□ 1.29
PABPC4-205ENST00000421687 FBLN2P98095 1184 aa23.13■■□□□ 1.29
PABPC4-205ENST00000421687 RAPGEF2Q9Y4G8 1499 aa23.11■■□□□ 1.29
PABPC4-205ENST00000421687 GRIN2AQ12879 1464 aa23.09■■□□□ 1.29
PABPC4-205ENST00000421687 CHD1O14646 1710 aa23.07■■□□□ 1.28
PABPC4-205ENST00000421687 KIF21BO75037 1637 aa23.06■■□□□ 1.28
PABPC4-205ENST00000421687 GOLGA3Q08378 1498 aa22.97■■□□□ 1.27
PABPC4-205ENST00000421687 NUP160Q12769 1436 aa22.97■■□□□ 1.27
PABPC4-205ENST00000421687 OSCARQ8IYS5 282 aa22.97■■□□□ 1.27
PABPC4-205ENST00000421687 CEP170Q5SW79 1584 aa22.94■■□□□ 1.26
PABPC4-205ENST00000421687 EHMT2Q96KQ7 1210 aa22.9■■□□□ 1.26
PABPC4-205ENST00000421687 KIAA0586Q9BVV6 1533 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms