RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 FAM69CQ0P6D2 419 aa16.46■□□□□ 0.23
SCRN1-204ENST00000421434 IGF1RP08069 1367 aa16.46■□□□□ 0.23
SCRN1-204ENST00000421434 TTBK1Q5TCY1 1321 aaPredicted RBP16.42■□□□□ 0.22
SCRN1-204ENST00000421434 KIF27Q86VH2 1401 aa16.41■□□□□ 0.22
SCRN1-204ENST00000421434 RUSC2Q8N2Y8 1516 aa16.4■□□□□ 0.22
SCRN1-204ENST00000421434 KIAA0586Q9BVV6 1533 aa16.39■□□□□ 0.21
SCRN1-204ENST00000421434 KIF13AQ9H1H9 1805 aa16.37■□□□□ 0.21
SCRN1-204ENST00000421434 ABCC10Q5T3U5 1492 aa16.35■□□□□ 0.21
SCRN1-204ENST00000421434 CARMIL1Q5VZK9 1371 aa16.35■□□□□ 0.21
SCRN1-204ENST00000421434 PTPRGP23470 1445 aa16.32■□□□□ 0.2
SCRN1-204ENST00000421434 ADCY10Q96PN6 1610 aa16.32■□□□□ 0.2
SCRN1-204ENST00000421434 MAPKBP1O60336 1514 aa16.29■□□□□ 0.2
SCRN1-204ENST00000421434 CUL7Q14999 1698 aa16.29■□□□□ 0.2
SCRN1-204ENST00000421434 DIP2BQ9P265 1576 aa16.26■□□□□ 0.19
SCRN1-204ENST00000421434 CARMIL2Q6F5E8 1435 aa16.25■□□□□ 0.19
SCRN1-204ENST00000421434 TNIKQ9UKE5 1360 aa16.25■□□□□ 0.19
SCRN1-204ENST00000421434 TSPOAP1O95153 1857 aa16.2■□□□□ 0.18
SCRN1-204ENST00000421434 KDM4FA0A1W2PPD8 638 aa16.19■□□□□ 0.18
SCRN1-204ENST00000421434 ABCC2Q92887 1545 aa16.18■□□□□ 0.18
SCRN1-204ENST00000421434 IQGAP2Q13576 1575 aa16.17■□□□□ 0.18
SCRN1-204ENST00000421434 KDM6BO15054 1643 aa16.17■□□□□ 0.18
SCRN1-204ENST00000421434 ASXL2Q76L83 1435 aa16.17■□□□□ 0.18
SCRN1-204ENST00000421434 UACAQ9BZF9 1416 aa16.15■□□□□ 0.18
SCRN1-204ENST00000421434 DISP1Q96F81 1524 aa16.14■□□□□ 0.18
SCRN1-204ENST00000421434 RAPGEF2Q9Y4G8 1499 aa16.14■□□□□ 0.17
SCRN1-204ENST00000421434 PLB1Q6P1J6 1458 aa16.13■□□□□ 0.17
SCRN1-204ENST00000421434 UHRF1BP1LA0JNW5 1464 aa16.11■□□□□ 0.17
SCRN1-204ENST00000421434 CHIC1Q5VXU3 224 aa16.11■□□□□ 0.17
SCRN1-204ENST00000421434 UGGT2Q9NYU1 1516 aa16.07■□□□□ 0.16
SCRN1-204ENST00000421434 GLI2P10070 1586 aa16.05■□□□□ 0.16
SCRN1-204ENST00000421434 KDM5BQ9UGL1 1544 aa16.05■□□□□ 0.16
SCRN1-204ENST00000421434 EPRSP07814 1512 aaKnown RBP16.04■□□□□ 0.16
SCRN1-204ENST00000421434 COL17A1Q9UMD9 1497 aaPredicted RBP16.03■□□□□ 0.16
SCRN1-204ENST00000421434 KCNH8Q96L42 1107 aa16.03■□□□□ 0.16
SCRN1-204ENST00000421434 PPRC1Q5VV67 1664 aaKnown RBP16.02■□□□□ 0.15
SCRN1-204ENST00000421434 KIAA0556O60303 1618 aa16.01■□□□□ 0.15
SCRN1-204ENST00000421434 ZCCHC11Q5TAX3 1644 aaKnown RBP16■□□□□ 0.15
SCRN1-204ENST00000421434 P3H3Q8IVL6 736 aa15.98■□□□□ 0.15
SCRN1-204ENST00000421434 ARID3CA6NKF2 412 aa15.97■□□□□ 0.15
SCRN1-204ENST00000421434 TEX14Q8IWB6 1497 aa15.97■□□□□ 0.15
SCRN1-204ENST00000421434 WDR7Q9Y4E6 1490 aa15.96■□□□□ 0.14
SCRN1-204ENST00000421434 MAP3K4Q9Y6R4 1608 aa15.95■□□□□ 0.14
SCRN1-204ENST00000421434 ADGRL1O94910 1474 aa15.95■□□□□ 0.14
SCRN1-204ENST00000421434 GOLGA3Q08378 1498 aa15.95■□□□□ 0.14
SCRN1-204ENST00000421434 CD109Q6YHK3 1445 aa15.93■□□□□ 0.14
SCRN1-204ENST00000421434 PRXQ9BXM0 1461 aa15.92■□□□□ 0.14
SCRN1-204ENST00000421434 FAM9AQ8IZU1 332 aaPredicted RBP15.92■□□□□ 0.14
SCRN1-204ENST00000421434 CTTNBP2Q8WZ74 1663 aa15.9■□□□□ 0.14
SCRN1-204ENST00000421434 ABCA8O94911 1581 aa15.89■□□□□ 0.13
SCRN1-204ENST00000421434 RANGAP1P46060 587 aaPredicted RBP15.88■□□□□ 0.13
SCRN1-204ENST00000421434 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
SCRN1-204ENST00000421434 MAGI3Q5TCQ9 1506 aa15.85■□□□□ 0.13
SCRN1-204ENST00000421434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.84■□□□□ 0.13
SCRN1-204ENST00000421434 HNRNPUL2Q1KMD3 747 aaKnown RBP15.84■□□□□ 0.13
SCRN1-204ENST00000421434 ILDR1Q86SU0 546 aaPredicted RBP15.84■□□□□ 0.13
SCRN1-204ENST00000421434 ATP10BO94823 1461 aa15.83■□□□□ 0.12
SCRN1-204ENST00000421434 CFAP43Q8NDM7 1665 aa15.8■□□□□ 0.12
SCRN1-204ENST00000421434 RAPGEF3O95398 923 aa15.77■□□□□ 0.12
SCRN1-204ENST00000421434 HECW2Q9P2P5 1572 aa15.75■□□□□ 0.11
SCRN1-204ENST00000421434 ARAP3Q8WWN8 1544 aa15.73■□□□□ 0.11
SCRN1-204ENST00000421434 PLEKHD1A6NEE1 506 aa15.71■□□□□ 0.11
SCRN1-204ENST00000421434 EHMT2Q96KQ7 1210 aa15.71■□□□□ 0.11
SCRN1-204ENST00000421434 FHOD3Q2V2M9 1422 aa15.7■□□□□ 0.1
SCRN1-204ENST00000421434 PHLDB1Q86UU1 1377 aa15.7■□□□□ 0.1
SCRN1-204ENST00000421434 SAMD9Q5K651 1589 aa15.7■□□□□ 0.1
SCRN1-204ENST00000421434 ARID4BQ4LE39 1312 aaPredicted RBP15.69■□□□□ 0.1
SCRN1-204ENST00000421434 KIF21BO75037 1637 aa15.69■□□□□ 0.1
SCRN1-204ENST00000421434 RAPGEF6Q8TEU7 1601 aa15.69■□□□□ 0.1
SCRN1-204ENST00000421434 ABCA9Q8IUA7 1624 aa15.68■□□□□ 0.1
SCRN1-204ENST00000421434 NUP153P49790 1475 aaKnown RBP15.67■□□□□ 0.1
SCRN1-204ENST00000421434 EEA1Q15075 1411 aa15.66■□□□□ 0.1
SCRN1-204ENST00000421434 NEO1Q92859 1461 aa15.65■□□□□ 0.1
SCRN1-204ENST00000421434 ATP1B4Q9UN42 357 aaPredicted RBP15.63■□□□□ 0.09
SCRN1-204ENST00000421434 PTPRMP28827 1452 aa15.61■□□□□ 0.09
SCRN1-204ENST00000421434 UBTFP17480 764 aaKnown RBP15.61■□□□□ 0.09
SCRN1-204ENST00000421434 PLPPR3Q6T4P5 718 aa15.59■□□□□ 0.09
SCRN1-204ENST00000421434 AKNAQ7Z591 1439 aa15.59■□□□□ 0.09
SCRN1-204ENST00000421434 DENND4BO75064 1496 aaPredicted RBP15.58■□□□□ 0.08
SCRN1-204ENST00000421434 FRMPD1Q5SYB0 1578 aa15.57■□□□□ 0.08
SCRN1-204ENST00000421434 FANCAO15360 1455 aa15.56■□□□□ 0.08
SCRN1-204ENST00000421434 ADAMTSL3P82987 1691 aa15.56■□□□□ 0.08
SCRN1-204ENST00000421434 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.55■□□□□ 0.08
SCRN1-204ENST00000421434 MLECQ14165 292 aa15.54■□□□□ 0.08
SCRN1-204ENST00000421434 CDK13Q14004 1512 aaKnown RBP15.53■□□□□ 0.08
SCRN1-204ENST00000421434 EFCAB5A4FU69 1503 aa15.53■□□□□ 0.08
SCRN1-204ENST00000421434 BCORL1Q5H9F3 1711 aa15.51■□□□□ 0.07
SCRN1-204ENST00000421434 MADDQ8WXG6 1647 aa15.51■□□□□ 0.07
SCRN1-204ENST00000421434 TTC37Q6PGP7 1564 aa15.5■□□□□ 0.07
SCRN1-204ENST00000421434 FBXO41Q8TF61 875 aa15.5■□□□□ 0.07
SCRN1-204ENST00000421434 YEATS2Q9ULM3 1422 aa15.5■□□□□ 0.07
SCRN1-204ENST00000421434 HSPA2P54652 639 aa15.49■□□□□ 0.07
SCRN1-204ENST00000421434 SCAPERQ9BY12 1400 aa15.49■□□□□ 0.07
SCRN1-204ENST00000421434 RICTORQ6R327 1708 aa15.48■□□□□ 0.07
SCRN1-204ENST00000421434 EFCAB2Q5VUJ9 269 aa15.48■□□□□ 0.07
SCRN1-204ENST00000421434 CDK11AQ9UQ88 783 aaPredicted RBP15.48■□□□□ 0.07
SCRN1-204ENST00000421434 PLCH2O75038 1416 aa15.48■□□□□ 0.07
SCRN1-204ENST00000421434 ARHGEF40Q8TER5 1519 aa15.48■□□□□ 0.07
SCRN1-204ENST00000421434 POGZQ7Z3K3 1410 aa15.47■□□□□ 0.07
SCRN1-204ENST00000421434 LMTK3Q96Q04 1460 aa15.46■□□□□ 0.06
SCRN1-204ENST00000421434 CFAP74Q9C0B2 1584 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms