RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 NISCHQ9Y2I1 1504 aa23.47■■□□□ 1.35
SCRN1-204ENST00000421434 ABCC9O60706 1549 aa21.28■■□□□ 1
SCRN1-204ENST00000421434 CCDC180Q9P1Z9 1646 aa20.98■□□□□ 0.95
SCRN1-204ENST00000421434 DNAJC5BQ9UF47 199 aa20.13■□□□□ 0.81
SCRN1-204ENST00000421434 RB1CC1Q8TDY2 1594 aa20.1■□□□□ 0.81
SCRN1-204ENST00000421434 DCAF8L2P0C7V8 631 aa20.1■□□□□ 0.81
SCRN1-204ENST00000421434 NACADO15069 1562 aa19.93■□□□□ 0.78
SCRN1-204ENST00000421434 PABPN1Q86U42 306 aaKnown RBP eCLIP19.89■□□□□ 0.77
SCRN1-204ENST00000421434 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
SCRN1-204ENST00000421434 MYO15BQ96JP2 1530 aa19.58■□□□□ 0.73
SCRN1-204ENST00000421434 BICRAQ9NZM4 1560 aa19.53■□□□□ 0.72
SCRN1-204ENST00000421434 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.69
SCRN1-204ENST00000421434 DCAF1Q9Y4B6 1507 aa19.3■□□□□ 0.68
SCRN1-204ENST00000421434 SCRIBQ14160 1630 aa19.23■□□□□ 0.67
SCRN1-204ENST00000421434 SHROOM4Q9ULL8 1493 aa19.16■□□□□ 0.66
SCRN1-204ENST00000421434 CECR2Q9BXF3 1484 aa19.15■□□□□ 0.66
SCRN1-204ENST00000421434 CC2D2AQ9P2K1 1620 aa19.14■□□□□ 0.66
SCRN1-204ENST00000421434 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
SCRN1-204ENST00000421434 DNAJC5Q9H3Z4 198 aa18.52■□□□□ 0.56
SCRN1-204ENST00000421434 NCAPD3P42695 1498 aa18.46■□□□□ 0.54
SCRN1-204ENST00000421434 ATAD2BQ9ULI0 1458 aa18.39■□□□□ 0.53
SCRN1-204ENST00000421434 ERCC6Q03468 1493 aa18.37■□□□□ 0.53
SCRN1-204ENST00000421434 SMARCA4P51532 1647 aa18.3■□□□□ 0.52
SCRN1-204ENST00000421434 CUX2O14529 1486 aa18.29■□□□□ 0.52
SCRN1-204ENST00000421434 SMARCA2P51531 1590 aa18.29■□□□□ 0.52
SCRN1-204ENST00000421434 NESP48681 1621 aa18.25■□□□□ 0.51
SCRN1-204ENST00000421434 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
SCRN1-204ENST00000421434 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
SCRN1-204ENST00000421434 BAZ1AQ9NRL2 1556 aaPredicted RBP18.2■□□□□ 0.5
SCRN1-204ENST00000421434 MROH2BQ7Z745 1585 aa18.11■□□□□ 0.49
SCRN1-204ENST00000421434 PEG3Q9GZU2 1588 aa18.08■□□□□ 0.48
SCRN1-204ENST00000421434 LAMC3Q9Y6N6 1575 aa18■□□□□ 0.47
SCRN1-204ENST00000421434 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
SCRN1-204ENST00000421434 THOC2Q8NI27 1593 aaKnown RBP17.96■□□□□ 0.46
SCRN1-204ENST00000421434 CADPSQ9ULU8 1353 aa17.92■□□□□ 0.46
SCRN1-204ENST00000421434 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
SCRN1-204ENST00000421434 WIZO95785 1651 aa17.87■□□□□ 0.45
SCRN1-204ENST00000421434 MRC2Q9UBG0 1479 aa17.8■□□□□ 0.44
SCRN1-204ENST00000421434 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
SCRN1-204ENST00000421434 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
SCRN1-204ENST00000421434 WDR62O43379 1518 aa17.72■□□□□ 0.43
SCRN1-204ENST00000421434 CEP164Q9UPV0 1460 aa17.71■□□□□ 0.43
SCRN1-204ENST00000421434 FANCD2Q9BXW9 1451 aa17.7■□□□□ 0.42
SCRN1-204ENST00000421434 CFTRP13569 1480 aa17.66■□□□□ 0.42
SCRN1-204ENST00000421434 TOP2AP11388 1531 aaKnown RBP17.6■□□□□ 0.41
SCRN1-204ENST00000421434 OSCARQ8IYS5 282 aa17.58■□□□□ 0.4
SCRN1-204ENST00000421434 URB2Q14146 1524 aaKnown RBP17.55■□□□□ 0.4
SCRN1-204ENST00000421434 CCDC88BA6NC98 1476 aa17.48■□□□□ 0.39
SCRN1-204ENST00000421434 ZNF608Q9ULD9 1512 aaPredicted RBP17.38■□□□□ 0.37
SCRN1-204ENST00000421434 IFT140Q96RY7 1462 aa17.36■□□□□ 0.37
SCRN1-204ENST00000421434 TOPBP1Q92547 1522 aa17.34■□□□□ 0.37
SCRN1-204ENST00000421434 PRDM2Q13029 1718 aa17.33■□□□□ 0.36
SCRN1-204ENST00000421434 ABCC8Q09428 1581 aa17.27■□□□□ 0.35
SCRN1-204ENST00000421434 AQRO60306 1485 aaKnown RBP eCLIP17.25■□□□□ 0.35
SCRN1-204ENST00000421434 FBLN2P98095 1184 aa17.24■□□□□ 0.35
SCRN1-204ENST00000421434 RIMBP3CA6NJZ7 1639 aa17.23■□□□□ 0.35
SCRN1-204ENST00000421434 RIMBP3BA6NNM3 1639 aa17.23■□□□□ 0.35
SCRN1-204ENST00000421434 RIMBP3Q9UFD9 1639 aa17.23■□□□□ 0.35
SCRN1-204ENST00000421434 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
SCRN1-204ENST00000421434 CYB5RLQ6IPT4 315 aa17.22■□□□□ 0.35
SCRN1-204ENST00000421434 EIF4G3O43432 1585 aaKnown RBP17.19■□□□□ 0.34
SCRN1-204ENST00000421434 ARHGEF11O15085 1522 aa17.19■□□□□ 0.34
SCRN1-204ENST00000421434 POLA1P09884 1462 aaPredicted RBP17.16■□□□□ 0.34
SCRN1-204ENST00000421434 RAD54L2Q9Y4B4 1467 aa17.16■□□□□ 0.34
SCRN1-204ENST00000421434 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
SCRN1-204ENST00000421434 TARBP1Q13395 1621 aaKnown RBP17.15■□□□□ 0.34
SCRN1-204ENST00000421434 SOGA1O94964 1423 aa17.14■□□□□ 0.33
SCRN1-204ENST00000421434 CHD1O14646 1710 aa17.08■□□□□ 0.32
SCRN1-204ENST00000421434 TRHP20396 242 aaPredicted RBP17.07■□□□□ 0.32
SCRN1-204ENST00000421434 CHMP7Q8WUX9 453 aaPredicted RBP17.06■□□□□ 0.32
SCRN1-204ENST00000421434 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
SCRN1-204ENST00000421434 ARAP1Q96P48 1450 aa17.02■□□□□ 0.32
SCRN1-204ENST00000421434 SNAPC4Q5SXM2 1469 aa17.01■□□□□ 0.31
SCRN1-204ENST00000421434 SUPT5HO00267 1087 aaKnown RBP17.01■□□□□ 0.31
SCRN1-204ENST00000421434 CUX1P39880 1505 aa17.01■□□□□ 0.31
SCRN1-204ENST00000421434 GRIN2BQ13224 1484 aa16.95■□□□□ 0.3
SCRN1-204ENST00000421434 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
SCRN1-204ENST00000421434 WDR97A6NE52 1622 aa16.89■□□□□ 0.29
SCRN1-204ENST00000421434 SYNJ2O15056 1496 aa16.89■□□□□ 0.29
SCRN1-204ENST00000421434 GAPVD1Q14C86 1478 aa16.89■□□□□ 0.29
SCRN1-204ENST00000421434 CLASP1Q7Z460 1538 aa16.89■□□□□ 0.29
SCRN1-204ENST00000421434 SYNJ1O43426 1573 aa16.89■□□□□ 0.29
SCRN1-204ENST00000421434 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
SCRN1-204ENST00000421434 PBRM1Q86U86 1689 aa16.79■□□□□ 0.28
SCRN1-204ENST00000421434 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
SCRN1-204ENST00000421434 AEBP2Q6ZN18 517 aaPredicted RBP16.77■□□□□ 0.28
SCRN1-204ENST00000421434 ABCA5Q8WWZ7 1642 aa16.75■□□□□ 0.27
SCRN1-204ENST00000421434 GRIN2AQ12879 1464 aa16.73■□□□□ 0.27
SCRN1-204ENST00000421434 ERCC6L2Q5T890 1561 aa16.69■□□□□ 0.26
SCRN1-204ENST00000421434 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
SCRN1-204ENST00000421434 FHAD1B1AJZ9 1412 aa16.66■□□□□ 0.26
SCRN1-204ENST00000421434 NUP160Q12769 1436 aa16.66■□□□□ 0.26
SCRN1-204ENST00000421434 CEP170Q5SW79 1584 aa16.65■□□□□ 0.26
SCRN1-204ENST00000421434 ADAMTS12P58397 1594 aa16.64■□□□□ 0.25
SCRN1-204ENST00000421434 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
SCRN1-204ENST00000421434 JPH4Q96JJ6 628 aa16.61■□□□□ 0.25
SCRN1-204ENST00000421434 ERICH3Q5RHP9 1530 aa16.59■□□□□ 0.25
SCRN1-204ENST00000421434 PRG4Q92954 1404 aaPredicted RBP16.57■□□□□ 0.24
SCRN1-204ENST00000421434 SHROOM2Q13796 1616 aa16.54■□□□□ 0.24
SCRN1-204ENST00000421434 NPM1P06748 294 aaKnown RBP eCLIP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms