RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 KIAA0586Q9BVV6 1533 aa33.54■■■□□ 2.96
EGFR-204ENST00000420316 JPH4Q96JJ6 628 aa33.49■■■□□ 2.95
EGFR-204ENST00000420316 RIMBP3CA6NJZ7 1639 aa33.47■■■□□ 2.95
EGFR-204ENST00000420316 RIMBP3BA6NNM3 1639 aa33.47■■■□□ 2.95
EGFR-204ENST00000420316 RIMBP3Q9UFD9 1639 aa33.47■■■□□ 2.95
EGFR-204ENST00000420316 KIF21BO75037 1637 aa33.43■■■□□ 2.94
EGFR-204ENST00000420316 SHROOM2Q13796 1616 aa33.43■■■□□ 2.94
EGFR-204ENST00000420316 CTTNBP2Q8WZ74 1663 aa33.36■■■□□ 2.93
EGFR-204ENST00000420316 PRG4Q92954 1404 aaPredicted RBP33.35■■■□□ 2.93
EGFR-204ENST00000420316 IQGAP2Q13576 1575 aa33.32■■■□□ 2.93
EGFR-204ENST00000420316 ERCC6L2Q5T890 1561 aa33.32■■■□□ 2.92
EGFR-204ENST00000420316 ARAP1Q96P48 1450 aa33.29■■■□□ 2.92
EGFR-204ENST00000420316 GOLGA3Q08378 1498 aa33.28■■■□□ 2.92
EGFR-204ENST00000420316 CYB5RLQ6IPT4 315 aa33.28■■■□□ 2.92
EGFR-204ENST00000420316 UBTFP17480 764 aaKnown RBP33.25■■■□□ 2.91
EGFR-204ENST00000420316 RANGAP1P46060 587 aaPredicted RBP33.2■■■□□ 2.91
EGFR-204ENST00000420316 UGGT2Q9NYU1 1516 aa33.18■■■□□ 2.9
EGFR-204ENST00000420316 CARMIL2Q6F5E8 1435 aa33.17■■■□□ 2.9
EGFR-204ENST00000420316 LOC105371045A0A1W2PR82 267 aa33.11■■■□□ 2.89
EGFR-204ENST00000420316 DISP1Q96F81 1524 aa33.1■■■□□ 2.89
EGFR-204ENST00000420316 TTBK1Q5TCY1 1321 aaPredicted RBP33.08■■■□□ 2.89
EGFR-204ENST00000420316 TNIKQ9UKE5 1360 aa33.04■■■□□ 2.88
EGFR-204ENST00000420316 P3H3Q8IVL6 736 aa33.02■■■□□ 2.88
EGFR-204ENST00000420316 PTPRGP23470 1445 aa33.01■■■□□ 2.88
EGFR-204ENST00000420316 KIAA0556O60303 1618 aa33.01■■■□□ 2.87
EGFR-204ENST00000420316 SAMD9Q5K651 1589 aa32.91■■■□□ 2.86
EGFR-204ENST00000420316 FHOD3Q2V2M9 1422 aa32.83■■■□□ 2.85
EGFR-204ENST00000420316 EFCAB5A4FU69 1503 aa32.8■■■□□ 2.84
EGFR-204ENST00000420316 ARHGAP35Q9NRY4 1499 aa32.79■■■□□ 2.84
EGFR-204ENST00000420316 UACAQ9BZF9 1416 aa32.78■■■□□ 2.84
EGFR-204ENST00000420316 UHRF1BP1LA0JNW5 1464 aa32.74■■■□□ 2.83
EGFR-204ENST00000420316 ADCY10Q96PN6 1610 aa32.74■■■□□ 2.83
EGFR-204ENST00000420316 NPM1P06748 294 aaKnown RBP eCLIP32.73■■■□□ 2.83
EGFR-204ENST00000420316 CLIP1P30622 1438 aa32.72■■■□□ 2.83
EGFR-204ENST00000420316 CEP162Q5TB80 1403 aa32.7■■■□□ 2.82
EGFR-204ENST00000420316 PLB1Q6P1J6 1458 aa32.69■■■□□ 2.82
EGFR-204ENST00000420316 ABCC2Q92887 1545 aa32.68■■■□□ 2.82
EGFR-204ENST00000420316 ABCA8O94911 1581 aa32.64■■■□□ 2.82
EGFR-204ENST00000420316 ARID3CA6NKF2 412 aa32.58■■■□□ 2.81
EGFR-204ENST00000420316 KDM5BQ9UGL1 1544 aa32.58■■■□□ 2.81
EGFR-204ENST00000420316 RAPGEF6Q8TEU7 1601 aa32.55■■■□□ 2.8
EGFR-204ENST00000420316 FMN1Q68DA7 1419 aa32.54■■■□□ 2.8
EGFR-204ENST00000420316 MAPKBP1O60336 1514 aa32.53■■■□□ 2.8
EGFR-204ENST00000420316 TRHP20396 242 aaPredicted RBP32.49■■■□□ 2.79
EGFR-204ENST00000420316 ATP1B4Q9UN42 357 aaPredicted RBP32.48■■■□□ 2.79
EGFR-204ENST00000420316 ZCCHC11Q5TAX3 1644 aaKnown RBP32.45■■■□□ 2.79
EGFR-204ENST00000420316 ASXL2Q76L83 1435 aa32.42■■■□□ 2.78
EGFR-204ENST00000420316 ATP10BO94823 1461 aa32.42■■■□□ 2.78
EGFR-204ENST00000420316 NUP153P49790 1475 aaKnown RBP32.42■■■□□ 2.78
EGFR-204ENST00000420316 PCF11O94913 1555 aaKnown RBP32.41■■■□□ 2.78
EGFR-204ENST00000420316 ABCC10Q5T3U5 1492 aa32.36■■■□□ 2.77
EGFR-204ENST00000420316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.35■■■□□ 2.77
EGFR-204ENST00000420316 HNRNPUL2Q1KMD3 747 aaKnown RBP32.35■■■□□ 2.77
EGFR-204ENST00000420316 HECW1Q76N89 1606 aa32.34■■■□□ 2.77
EGFR-204ENST00000420316 LRRIQ1Q96JM4 1722 aa32.33■■■□□ 2.77
EGFR-204ENST00000420316 CDK13Q14004 1512 aaKnown RBP32.32■■■□□ 2.77
EGFR-204ENST00000420316 FAM69CQ0P6D2 419 aa32.31■■■□□ 2.76
EGFR-204ENST00000420316 CASKIN1Q8WXD9 1431 aa32.3■■■□□ 2.76
EGFR-204ENST00000420316 WDR7Q9Y4E6 1490 aa32.29■■■□□ 2.76
EGFR-204ENST00000420316 EPRSP07814 1512 aaKnown RBP32.26■■■□□ 2.75
EGFR-204ENST00000420316 DIP2BQ9P265 1576 aa32.26■■■□□ 2.75
EGFR-204ENST00000420316 FYCO1Q9BQS8 1478 aa32.24■■■□□ 2.75
EGFR-204ENST00000420316 VPS8Q8N3P4 1428 aa32.22■■■□□ 2.75
EGFR-204ENST00000420316 PLEKHD1A6NEE1 506 aa32.21■■■□□ 2.75
EGFR-204ENST00000420316 KIF13AQ9H1H9 1805 aa32.2■■■□□ 2.75
EGFR-204ENST00000420316 KCNH8Q96L42 1107 aa32.19■■■□□ 2.74
EGFR-204ENST00000420316 GLI2P10070 1586 aa32.18■■■□□ 2.74
EGFR-204ENST00000420316 CDK11AQ9UQ88 783 aaPredicted RBP32.15■■■□□ 2.74
EGFR-204ENST00000420316 CCDC18Q5T9S5 1454 aa32.13■■■□□ 2.73
EGFR-204ENST00000420316 MAGI3Q5TCQ9 1506 aa32.04■■■□□ 2.72
EGFR-204ENST00000420316 TSPOAP1O95153 1857 aa31.99■■■□□ 2.71
EGFR-204ENST00000420316 MAP3K4Q9Y6R4 1608 aa31.99■■■□□ 2.71
EGFR-204ENST00000420316 TROQ12816 1431 aaPredicted RBP31.99■■■□□ 2.71
EGFR-204ENST00000420316 CD109Q6YHK3 1445 aa31.99■■■□□ 2.71
EGFR-204ENST00000420316 CFAP43Q8NDM7 1665 aa31.97■■■□□ 2.71
EGFR-204ENST00000420316 TIAM1Q13009 1591 aa31.95■■■□□ 2.71
EGFR-204ENST00000420316 KIF14Q15058 1648 aa31.95■■■□□ 2.71
EGFR-204ENST00000420316 ABCA9Q8IUA7 1624 aa31.95■■■□□ 2.71
EGFR-204ENST00000420316 TEX14Q8IWB6 1497 aa31.89■■■□□ 2.7
EGFR-204ENST00000420316 MTUS2Q5JR59 1369 aa31.89■■■□□ 2.7
EGFR-204ENST00000420316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.88■■■□□ 2.69
EGFR-204ENST00000420316 TTC37Q6PGP7 1564 aa31.88■■■□□ 2.69
EGFR-204ENST00000420316 PPRC1Q5VV67 1664 aaKnown RBP31.87■■■□□ 2.69
EGFR-204ENST00000420316 KANK4Q5T7N3 995 aaPredicted RBP31.86■■■□□ 2.69
EGFR-204ENST00000420316 APLP2Q06481 763 aa31.85■■■□□ 2.69
EGFR-204ENST00000420316 MAP3K1Q13233 1512 aa31.82■■■□□ 2.68
EGFR-204ENST00000420316 EHBP1L1Q8N3D4 1523 aa31.81■■■□□ 2.68
EGFR-204ENST00000420316 LRRC9Q6ZRR7 1453 aa31.8■■■□□ 2.68
EGFR-204ENST00000420316 PLCH2O75038 1416 aa31.76■■■□□ 2.67
EGFR-204ENST00000420316 PHLDB1Q86UU1 1377 aa31.75■■■□□ 2.67
EGFR-204ENST00000420316 PPARGC1BQ86YN6 1023 aaKnown RBP31.75■■■□□ 2.67
EGFR-204ENST00000420316 NEO1Q92859 1461 aa31.71■■■□□ 2.67
EGFR-204ENST00000420316 MYO5CQ9NQX4 1742 aa31.71■■■□□ 2.67
EGFR-204ENST00000420316 SUPT6HQ7KZ85 1726 aaKnown RBP31.69■■■□□ 2.66
EGFR-204ENST00000420316 ARAP3Q8WWN8 1544 aa31.68■■■□□ 2.66
EGFR-204ENST00000420316 FANCAO15360 1455 aa31.68■■■□□ 2.66
EGFR-204ENST00000420316 KDM6BO15054 1643 aa31.67■■■□□ 2.66
EGFR-204ENST00000420316 EFCAB2Q5VUJ9 269 aa31.67■■■□□ 2.66
EGFR-204ENST00000420316 CDC42BPAQ5VT25 1732 aa31.66■■■□□ 2.66
EGFR-204ENST00000420316 NCOA2Q15596 1464 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms