RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 NISCHQ9Y2I1 1504 aa48.51■■■■■ 5.36
EGFR-204ENST00000420316 CCDC180Q9P1Z9 1646 aa42.93■■■■■ 4.46
EGFR-204ENST00000420316 ABCC9O60706 1549 aa41.78■■■■■ 4.28
EGFR-204ENST00000420316 DCAF8L2P0C7V8 631 aa40.5■■■■■ 4.07
EGFR-204ENST00000420316 ZCCHC6Q5VYS8 1495 aaKnown RBP40.45■■■■■ 4.07
EGFR-204ENST00000420316 NACADO15069 1562 aa40.36■■■■■ 4.05
EGFR-204ENST00000420316 RB1CC1Q8TDY2 1594 aa40.32■■■■■ 4.04
EGFR-204ENST00000420316 MYO15BQ96JP2 1530 aa40.26■■■■■ 4.04
EGFR-204ENST00000420316 DCAF1Q9Y4B6 1507 aa40.18■■■■■ 4.02
EGFR-204ENST00000420316 UNC13AQ9UPW8 1703 aa39.36■■■■□ 3.89
EGFR-204ENST00000420316 SCRIBQ14160 1630 aa39.29■■■■□ 3.88
EGFR-204ENST00000420316 PABPN1Q86U42 306 aaKnown RBP eCLIP39.13■■■■□ 3.85
EGFR-204ENST00000420316 BICRAQ9NZM4 1560 aa39.07■■■■□ 3.85
EGFR-204ENST00000420316 SHROOM4Q9ULL8 1493 aa38.78■■■■□ 3.8
EGFR-204ENST00000420316 DNAJC5BQ9UF47 199 aa38.15■■■■□ 3.7
EGFR-204ENST00000420316 EIF4G1Q04637 1599 aaKnown RBP38.02■■■■□ 3.68
EGFR-204ENST00000420316 CECR2Q9BXF3 1484 aa37.8■■■■□ 3.64
EGFR-204ENST00000420316 CC2D2AQ9P2K1 1620 aa37.78■■■■□ 3.64
EGFR-204ENST00000420316 BAZ1AQ9NRL2 1556 aaPredicted RBP37.57■■■■□ 3.6
EGFR-204ENST00000420316 SMARCA4P51532 1647 aa37.53■■■■□ 3.6
EGFR-204ENST00000420316 MROH2BQ7Z745 1585 aa37.43■■■■□ 3.58
EGFR-204ENST00000420316 ATAD2BQ9ULI0 1458 aa37.32■■■■□ 3.56
EGFR-204ENST00000420316 NCAPD3P42695 1498 aa37.28■■■■□ 3.56
EGFR-204ENST00000420316 SMARCA2P51531 1590 aa37.27■■■■□ 3.56
EGFR-204ENST00000420316 PEG3Q9GZU2 1588 aa37.2■■■■□ 3.55
EGFR-204ENST00000420316 RSF1Q96T23 1441 aaPredicted RBP37.11■■■■□ 3.53
EGFR-204ENST00000420316 WIZO95785 1651 aa37.09■■■■□ 3.53
EGFR-204ENST00000420316 HMGXB3Q12766 1538 aa37.07■■■■□ 3.52
EGFR-204ENST00000420316 BAZ1BQ9UIG0 1483 aaKnown RBP37■■■■□ 3.51
EGFR-204ENST00000420316 SUPT5HO00267 1087 aaKnown RBP36.66■■■■□ 3.46
EGFR-204ENST00000420316 TOP2AP11388 1531 aaKnown RBP36.6■■■■□ 3.45
EGFR-204ENST00000420316 CCDC88BA6NC98 1476 aa36.23■■■■□ 3.39
EGFR-204ENST00000420316 NESP48681 1621 aa36.22■■■■□ 3.39
EGFR-204ENST00000420316 CADPSQ9ULU8 1353 aa36.22■■■■□ 3.39
EGFR-204ENST00000420316 LAMC3Q9Y6N6 1575 aa36.2■■■■□ 3.39
EGFR-204ENST00000420316 CFTRP13569 1480 aa36.04■■■■□ 3.36
EGFR-204ENST00000420316 PDS5BQ9NTI5 1447 aa36.01■■■■□ 3.35
EGFR-204ENST00000420316 ERCC6Q03468 1493 aa36■■■■□ 3.35
EGFR-204ENST00000420316 KIF21AQ7Z4S6 1674 aa35.77■■■■□ 3.32
EGFR-204ENST00000420316 FANCD2Q9BXW9 1451 aa35.76■■■■□ 3.31
EGFR-204ENST00000420316 PRDM2Q13029 1718 aa35.69■■■■□ 3.3
EGFR-204ENST00000420316 CEP164Q9UPV0 1460 aa35.67■■■■□ 3.3
EGFR-204ENST00000420316 THOC2Q8NI27 1593 aaKnown RBP35.58■■■■□ 3.29
EGFR-204ENST00000420316 MRC2Q9UBG0 1479 aa35.56■■■■□ 3.28
EGFR-204ENST00000420316 CUX2O14529 1486 aa35.54■■■■□ 3.28
EGFR-204ENST00000420316 WDR62O43379 1518 aa35.42■■■■□ 3.26
EGFR-204ENST00000420316 URB2Q14146 1524 aaKnown RBP35.36■■■■□ 3.25
EGFR-204ENST00000420316 ABCC8Q09428 1581 aa35.27■■■■□ 3.24
EGFR-204ENST00000420316 TOPBP1Q92547 1522 aa35.21■■■■□ 3.23
EGFR-204ENST00000420316 DNMBPQ6XZF7 1577 aa35.17■■■■□ 3.22
EGFR-204ENST00000420316 CUX1P39880 1505 aa35.07■■■■□ 3.2
EGFR-204ENST00000420316 WRNQ14191 1432 aaPredicted RBP eCLIP34.96■■■■□ 3.19
EGFR-204ENST00000420316 IFT140Q96RY7 1462 aa34.94■■■■□ 3.18
EGFR-204ENST00000420316 POLA1P09884 1462 aaPredicted RBP34.93■■■■□ 3.18
EGFR-204ENST00000420316 SYNJ1O43426 1573 aa34.93■■■■□ 3.18
EGFR-204ENST00000420316 FGD5Q6ZNL6 1462 aa34.88■■■■□ 3.17
EGFR-204ENST00000420316 SOGA1O94964 1423 aa34.83■■■■□ 3.17
EGFR-204ENST00000420316 TOP2BQ02880 1626 aa34.83■■■■□ 3.17
EGFR-204ENST00000420316 BIVM-ERCC5R4GMW8 1640 aa34.83■■■■□ 3.17
EGFR-204ENST00000420316 RAD54L2Q9Y4B4 1467 aa34.8■■■■□ 3.16
EGFR-204ENST00000420316 TARBP1Q13395 1621 aaKnown RBP34.78■■■■□ 3.16
EGFR-204ENST00000420316 ZNF608Q9ULD9 1512 aaPredicted RBP34.73■■■■□ 3.15
EGFR-204ENST00000420316 AQRO60306 1485 aaKnown RBP eCLIP34.6■■■■□ 3.13
EGFR-204ENST00000420316 TDRD9Q8NDG6 1382 aaKnown RBP34.59■■■■□ 3.13
EGFR-204ENST00000420316 ABCA10Q8WWZ4 1543 aa34.59■■■■□ 3.13
EGFR-204ENST00000420316 EIF4G3O43432 1585 aaKnown RBP34.55■■■■□ 3.12
EGFR-204ENST00000420316 WDR97A6NE52 1622 aa34.55■■■■□ 3.12
EGFR-204ENST00000420316 TRIM41Q8WV44 630 aa34.49■■■■□ 3.11
EGFR-204ENST00000420316 GAPVD1Q14C86 1478 aa34.41■■■■□ 3.1
EGFR-204ENST00000420316 CHIC1Q5VXU3 224 aa34.4■■■■□ 3.1
EGFR-204ENST00000420316 GRIN2BQ13224 1484 aa34.37■■■■□ 3.09
EGFR-204ENST00000420316 ABCA5Q8WWZ7 1642 aa34.36■■■■□ 3.09
EGFR-204ENST00000420316 PBRM1Q86U86 1689 aa34.29■■■■□ 3.08
EGFR-204ENST00000420316 SNAPC4Q5SXM2 1469 aa34.25■■■■□ 3.07
EGFR-204ENST00000420316 MAGI1Q96QZ7 1491 aaPredicted RBP34.25■■■■□ 3.07
EGFR-204ENST00000420316 KIF27Q86VH2 1401 aa34.22■■■■□ 3.07
EGFR-204ENST00000420316 OSCARQ8IYS5 282 aa34.19■■■■□ 3.06
EGFR-204ENST00000420316 DNAJC5Q9H3Z4 198 aa34.18■■■■□ 3.06
EGFR-204ENST00000420316 RUSC2Q8N2Y8 1516 aa34.17■■■■□ 3.06
EGFR-204ENST00000420316 ERICH3Q5RHP9 1530 aa34.17■■■■□ 3.06
EGFR-204ENST00000420316 FBLN2P98095 1184 aa34.15■■■■□ 3.06
EGFR-204ENST00000420316 CHMP7Q8WUX9 453 aaPredicted RBP34.12■■■■□ 3.05
EGFR-204ENST00000420316 SYNJ2O15056 1496 aa34.11■■■■□ 3.05
EGFR-204ENST00000420316 IGF1RP08069 1367 aa34.07■■■■□ 3.04
EGFR-204ENST00000420316 CHD1O14646 1710 aa34.05■■■■□ 3.04
EGFR-204ENST00000420316 FHAD1B1AJZ9 1412 aa34.04■■■■□ 3.04
EGFR-204ENST00000420316 ADAMTS12P58397 1594 aa34.01■■■■□ 3.03
EGFR-204ENST00000420316 FAM9AQ8IZU1 332 aaPredicted RBP33.94■■■■□ 3.02
EGFR-204ENST00000420316 GRIN2AQ12879 1464 aa33.91■■■■□ 3.02
EGFR-204ENST00000420316 CARMIL1Q5VZK9 1371 aa33.86■■■■□ 3.01
EGFR-204ENST00000420316 CUL7Q14999 1698 aa33.86■■■■□ 3.01
EGFR-204ENST00000420316 NUP160Q12769 1436 aa33.77■■■■□ 3
EGFR-204ENST00000420316 EEA1Q15075 1411 aa33.77■■■■□ 3
EGFR-204ENST00000420316 CSRNP3Q8WYN3 585 aa33.74■■■□□ 2.99
EGFR-204ENST00000420316 CLASP1Q7Z460 1538 aa33.74■■■□□ 2.99
EGFR-204ENST00000420316 CEP170Q5SW79 1584 aa33.69■■■□□ 2.98
EGFR-204ENST00000420316 RAPGEF2Q9Y4G8 1499 aa33.67■■■□□ 2.98
EGFR-204ENST00000420316 PRXQ9BXM0 1461 aa33.63■■■□□ 2.97
EGFR-204ENST00000420316 EHMT2Q96KQ7 1210 aa33.59■■■□□ 2.97
EGFR-204ENST00000420316 ARHGEF11O15085 1522 aa33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms