RNA–Protein interactions for RNA: ENST00000420222.1

SH3PXD2A-204, Transcript of SH3 and PX domains 2A, humanhuman

TSL 2

Gene SH3PXD2A, Length 3,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-204ENST00000420222 CNGB1Q14028 1251 aaPredicted RBP20.92■□□□□ 0.94
SH3PXD2A-204ENST00000420222 SETD5Q9C0A6 1442 aa20.91■□□□□ 0.94
SH3PXD2A-204ENST00000420222 CDK11AQ9UQ88 783 aaPredicted RBP20.91■□□□□ 0.94
SH3PXD2A-204ENST00000420222 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
SH3PXD2A-204ENST00000420222 PRXQ9BXM0 1461 aa20.89■□□□□ 0.93
SH3PXD2A-204ENST00000420222 ARHGAP35Q9NRY4 1499 aa20.87■□□□□ 0.93
SH3PXD2A-204ENST00000420222 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
SH3PXD2A-204ENST00000420222 KIF27Q86VH2 1401 aa20.84■□□□□ 0.93
SH3PXD2A-204ENST00000420222 PHLDB1Q86UU1 1377 aa20.83■□□□□ 0.93
SH3PXD2A-204ENST00000420222 TONSLQ96HA7 1378 aa20.83■□□□□ 0.92
SH3PXD2A-204ENST00000420222 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
SH3PXD2A-204ENST00000420222 CCER2I3L3R5 266 aa20.81■□□□□ 0.92
SH3PXD2A-204ENST00000420222 BICRAQ9NZM4 1560 aa20.8■□□□□ 0.92
SH3PXD2A-204ENST00000420222 CUX2O14529 1486 aa20.8■□□□□ 0.92
SH3PXD2A-204ENST00000420222 SENP3-EIF4A1A0A087X0R7 540 aa20.79■□□□□ 0.92
SH3PXD2A-204ENST00000420222 NBR1Q14596 966 aa20.76■□□□□ 0.91
SH3PXD2A-204ENST00000420222 FAM9BQ8IZU0 186 aa20.75■□□□□ 0.91
SH3PXD2A-204ENST00000420222 B4GALNT3Q6L9W6 998 aa20.75■□□□□ 0.91
SH3PXD2A-204ENST00000420222 PEG3Q9GZU2 1588 aa20.71■□□□□ 0.91
SH3PXD2A-204ENST00000420222 CUX1P39880 1505 aa20.7■□□□□ 0.91
SH3PXD2A-204ENST00000420222 TIAM1Q13009 1591 aa20.66■□□□□ 0.9
SH3PXD2A-204ENST00000420222 LRRC9Q6ZRR7 1453 aa20.66■□□□□ 0.9
SH3PXD2A-204ENST00000420222 CCDC184Q52MB2 194 aa20.66■□□□□ 0.9
SH3PXD2A-204ENST00000420222 BIVM-ERCC5R4GMW8 1640 aa20.65■□□□□ 0.9
SH3PXD2A-204ENST00000420222 DEKP35659 375 aaKnown RBP20.63■□□□□ 0.89
SH3PXD2A-204ENST00000420222 FANCIQ9NVI1 1328 aa20.63■□□□□ 0.89
SH3PXD2A-204ENST00000420222 POLR3GLQ9BT43 218 aa20.62■□□□□ 0.89
SH3PXD2A-204ENST00000420222 CHIC2Q9UKJ5 165 aa20.62■□□□□ 0.89
SH3PXD2A-204ENST00000420222 FHOD3Q2V2M9 1422 aa20.59■□□□□ 0.89
SH3PXD2A-204ENST00000420222 CARMIL1Q5VZK9 1371 aa20.58■□□□□ 0.89
SH3PXD2A-204ENST00000420222 HSPA5P11021 654 aaKnown RBP20.57■□□□□ 0.88
SH3PXD2A-204ENST00000420222 MRS2Q9HD23 443 aa20.57■□□□□ 0.88
SH3PXD2A-204ENST00000420222 PPP4R2Q9NY27 417 aa20.57■□□□□ 0.88
SH3PXD2A-204ENST00000420222 RRP7BPQ9NSQ0 103 aa20.57■□□□□ 0.88
SH3PXD2A-204ENST00000420222 TIMELESSQ9UNS1 1208 aa20.57■□□□□ 0.88
SH3PXD2A-204ENST00000420222 IGF1RP08069 1367 aa20.56■□□□□ 0.88
SH3PXD2A-204ENST00000420222 WASHC2AQ641Q2 1341 aa20.53■□□□□ 0.88
SH3PXD2A-204ENST00000420222 FOXD1Q16676 465 aa20.52■□□□□ 0.87
SH3PXD2A-204ENST00000420222 ARID3CA6NKF2 412 aa20.51■□□□□ 0.87
SH3PXD2A-204ENST00000420222 PAK3O75914 559 aaPredicted RBP20.5■□□□□ 0.87
SH3PXD2A-204ENST00000420222 CCDC18Q5T9S5 1454 aa20.5■□□□□ 0.87
SH3PXD2A-204ENST00000420222 PCF11O94913 1555 aaKnown RBP20.48■□□□□ 0.87
SH3PXD2A-204ENST00000420222 MTUS2Q5JR59 1369 aa20.48■□□□□ 0.87
SH3PXD2A-204ENST00000420222 FHAD1B1AJZ9 1412 aa20.47■□□□□ 0.87
SH3PXD2A-204ENST00000420222 NOP58Q9Y2X3 529 aaKnown RBP20.47■□□□□ 0.87
SH3PXD2A-204ENST00000420222 EIF4G2P78344 907 aaKnown RBP eCLIP20.45■□□□□ 0.86
SH3PXD2A-204ENST00000420222 NPM2Q86SE8 214 aaKnown RBP20.43■□□□□ 0.86
SH3PXD2A-204ENST00000420222 C11orf95C9JLR9 678 aaPredicted RBP20.41■□□□□ 0.86
SH3PXD2A-204ENST00000420222 ZNF326Q5BKZ1 582 aaKnown RBP20.4■□□□□ 0.86
SH3PXD2A-204ENST00000420222 CCDC136Q96JN2 1154 aa20.39■□□□□ 0.86
SH3PXD2A-204ENST00000420222 PTPRKQ15262 1439 aa20.39■□□□□ 0.85
SH3PXD2A-204ENST00000420222 RTL5Q5HYW3 569 aaPredicted RBP20.38■□□□□ 0.85
SH3PXD2A-204ENST00000420222 FGD6Q6ZV73 1430 aa20.38■□□□□ 0.85
SH3PXD2A-204ENST00000420222 RTN4Q9NQC3 1192 aaKnown RBP20.38■□□□□ 0.85
SH3PXD2A-204ENST00000420222 AQRO60306 1485 aaKnown RBP eCLIP20.38■□□□□ 0.856e-7■■■□□ 16.8
SH3PXD2A-204ENST00000420222 PRKRIP1Q9H875 184 aaPredicted RBP20.37■□□□□ 0.85
SH3PXD2A-204ENST00000420222 UACAQ9BZF9 1416 aa20.35■□□□□ 0.85
SH3PXD2A-204ENST00000420222 ANP32AP39687 249 aaKnown RBP20.35■□□□□ 0.85
SH3PXD2A-204ENST00000420222 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
SH3PXD2A-204ENST00000420222 L3MBTL2Q969R5 705 aa20.34■□□□□ 0.85
SH3PXD2A-204ENST00000420222 MAP3K1Q13233 1512 aa20.33■□□□□ 0.85
SH3PXD2A-204ENST00000420222 AKNAQ7Z591 1439 aa20.33■□□□□ 0.84
SH3PXD2A-204ENST00000420222 SALL2Q9Y467 1007 aaPredicted RBP20.32■□□□□ 0.84
SH3PXD2A-204ENST00000420222 CFTRP13569 1480 aa20.31■□□□□ 0.84
SH3PXD2A-204ENST00000420222 ZBTB47Q9UFB7 747 aaPredicted RBP20.29■□□□□ 0.84
SH3PXD2A-204ENST00000420222 CFAP43Q8NDM7 1665 aa20.28■□□□□ 0.84
SH3PXD2A-204ENST00000420222 CNTLNQ9NXG0 1405 aa20.28■□□□□ 0.84
SH3PXD2A-204ENST00000420222 MYT1LQ9UL68 1186 aa20.28■□□□□ 0.84
SH3PXD2A-204ENST00000420222 ZBED9Q6R2W3 1325 aa20.27■□□□□ 0.84
SH3PXD2A-204ENST00000420222 NAIPQ13075 1403 aa20.27■□□□□ 0.84
SH3PXD2A-204ENST00000420222 ERICH6BQ5W0A0 696 aa20.27■□□□□ 0.84
SH3PXD2A-204ENST00000420222 HFM1A2PYH4 1435 aa20.26■□□□□ 0.83
SH3PXD2A-204ENST00000420222 ANO8Q9HCE9 1232 aaPredicted RBP20.26■□□□□ 0.83
SH3PXD2A-204ENST00000420222 LAS1LQ9Y4W2 734 aaKnown RBP20.26■□□□□ 0.83
SH3PXD2A-204ENST00000420222 PTPN23Q9H3S7 1636 aa20.25■□□□□ 0.83
SH3PXD2A-204ENST00000420222 RAD54L2Q9Y4B4 1467 aa20.24■□□□□ 0.83
SH3PXD2A-204ENST00000420222 FMN1Q68DA7 1419 aa20.24■□□□□ 0.83
SH3PXD2A-204ENST00000420222 CCDC7Q96M83 1385 aa20.23■□□□□ 0.83
SH3PXD2A-204ENST00000420222 FYCO1Q9BQS8 1478 aa20.22■□□□□ 0.83
SH3PXD2A-204ENST00000420222 MPHOSPH9Q99550 1183 aa20.22■□□□□ 0.83
SH3PXD2A-204ENST00000420222 CASKIN1Q8WXD9 1431 aa20.22■□□□□ 0.83
SH3PXD2A-204ENST00000420222 NBPF8Q3BBV2 869 aa20.21■□□□□ 0.83
SH3PXD2A-204ENST00000420222 NCAPD3P42695 1498 aa20.21■□□□□ 0.83
SH3PXD2A-204ENST00000420222 IL27Q8NEV9 243 aa20.19■□□□□ 0.82
SH3PXD2A-204ENST00000420222 IPO9Q96P70 1041 aaKnown RBP20.19■□□□□ 0.82
SH3PXD2A-204ENST00000420222 KIF7Q2M1P5 1343 aa20.19■□□□□ 0.82
SH3PXD2A-204ENST00000420222 PRKCSHP14314 528 aaPredicted RBP20.19■□□□□ 0.82
SH3PXD2A-204ENST00000420222 NCOA2Q15596 1464 aa20.18■□□□□ 0.82
SH3PXD2A-204ENST00000420222 MYOM3Q5VTT5 1437 aa20.15■□□□□ 0.82
SH3PXD2A-204ENST00000420222 KDM5BQ9UGL1 1544 aa20.14■□□□□ 0.81
SH3PXD2A-204ENST00000420222 NUDCQ9Y266 331 aa20.14■□□□□ 0.81
SH3PXD2A-204ENST00000420222 HMGXB3Q12766 1538 aa20.13■□□□□ 0.81
SH3PXD2A-204ENST00000420222 SLC4A1APQ9BWU0 796 aaKnown RBP20.13■□□□□ 0.81
SH3PXD2A-204ENST00000420222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.13■□□□□ 0.81
SH3PXD2A-204ENST00000420222 TMC1Q8TDI8 760 aa20.12■□□□□ 0.81
SH3PXD2A-204ENST00000420222 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.12■□□□□ 0.81
SH3PXD2A-204ENST00000420222 CADPSQ9ULU8 1353 aa20.11■□□□□ 0.81
SH3PXD2A-204ENST00000420222 NEFMP07197 916 aa20.1■□□□□ 0.81
SH3PXD2A-204ENST00000420222 NCOA1Q15788 1441 aa20.08■□□□□ 0.8
SH3PXD2A-204ENST00000420222 SKAP1Q86WV1 359 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms