RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 ADAMTS12P58397 1594 aa16.52■□□□□ 0.24
NUP50-205ENST00000419387 ERICH3Q5RHP9 1530 aa16.51■□□□□ 0.23
NUP50-205ENST00000419387 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
NUP50-205ENST00000419387 NUP160Q12769 1436 aa16.49■□□□□ 0.23
NUP50-205ENST00000419387 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
NUP50-205ENST00000419387 ERCC6L2Q5T890 1561 aa16.4■□□□□ 0.22
NUP50-205ENST00000419387 KIF27Q86VH2 1401 aa16.38■□□□□ 0.21
NUP50-205ENST00000419387 JPH4Q96JJ6 628 aa16.38■□□□□ 0.21
NUP50-205ENST00000419387 IGF1RP08069 1367 aa16.38■□□□□ 0.21
NUP50-205ENST00000419387 SHROOM2Q13796 1616 aa16.37■□□□□ 0.21
NUP50-205ENST00000419387 PRG4Q92954 1404 aaPredicted RBP16.34■□□□□ 0.21
NUP50-205ENST00000419387 RUSC2Q8N2Y8 1516 aa16.28■□□□□ 0.2
NUP50-205ENST00000419387 CUL7Q14999 1698 aa16.27■□□□□ 0.2
NUP50-205ENST00000419387 KIAA0586Q9BVV6 1533 aa16.27■□□□□ 0.2
NUP50-205ENST00000419387 CARMIL1Q5VZK9 1371 aa16.26■□□□□ 0.19
NUP50-205ENST00000419387 NPM1P06748 294 aaKnown RBP eCLIP16.18■□□□□ 0.18
NUP50-205ENST00000419387 PTPRGP23470 1445 aa16.11■□□□□ 0.17
NUP50-205ENST00000419387 CARMIL2Q6F5E8 1435 aa16.11■□□□□ 0.17
NUP50-205ENST00000419387 RAPGEF2Q9Y4G8 1499 aa16.11■□□□□ 0.17
NUP50-205ENST00000419387 TNIKQ9UKE5 1360 aa16.1■□□□□ 0.17
NUP50-205ENST00000419387 ADCY10Q96PN6 1610 aa16.09■□□□□ 0.17
NUP50-205ENST00000419387 FAM69CQ0P6D2 419 aa16.09■□□□□ 0.17
NUP50-205ENST00000419387 TTBK1Q5TCY1 1321 aaPredicted RBP16.09■□□□□ 0.17
NUP50-205ENST00000419387 IQGAP2Q13576 1575 aa16.09■□□□□ 0.17
NUP50-205ENST00000419387 MAPKBP1O60336 1514 aa16.06■□□□□ 0.16
NUP50-205ENST00000419387 ABCC10Q5T3U5 1492 aa16.06■□□□□ 0.16
NUP50-205ENST00000419387 KIF13AQ9H1H9 1805 aa16.05■□□□□ 0.16
NUP50-205ENST00000419387 DISP1Q96F81 1524 aa16.03■□□□□ 0.16
NUP50-205ENST00000419387 UGGT2Q9NYU1 1516 aa16.01■□□□□ 0.15
NUP50-205ENST00000419387 DIP2BQ9P265 1576 aa15.99■□□□□ 0.15
NUP50-205ENST00000419387 ABCC2Q92887 1545 aa15.99■□□□□ 0.15
NUP50-205ENST00000419387 UACAQ9BZF9 1416 aa15.98■□□□□ 0.15
NUP50-205ENST00000419387 UHRF1BP1LA0JNW5 1464 aa15.97■□□□□ 0.15
NUP50-205ENST00000419387 PRXQ9BXM0 1461 aa15.97■□□□□ 0.15
NUP50-205ENST00000419387 KIAA0556O60303 1618 aa15.94■□□□□ 0.14
NUP50-205ENST00000419387 ASXL2Q76L83 1435 aa15.93■□□□□ 0.14
NUP50-205ENST00000419387 PLB1Q6P1J6 1458 aa15.92■□□□□ 0.14
NUP50-205ENST00000419387 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
NUP50-205ENST00000419387 CTTNBP2Q8WZ74 1663 aa15.91■□□□□ 0.14
NUP50-205ENST00000419387 GOLGA3Q08378 1498 aa15.9■□□□□ 0.14
NUP50-205ENST00000419387 KDM5BQ9UGL1 1544 aa15.89■□□□□ 0.13
NUP50-205ENST00000419387 GLI2P10070 1586 aa15.86■□□□□ 0.13
NUP50-205ENST00000419387 TSPOAP1O95153 1857 aa15.86■□□□□ 0.13
NUP50-205ENST00000419387 EEA1Q15075 1411 aa15.84■□□□□ 0.13
NUP50-205ENST00000419387 FAM9AQ8IZU1 332 aaPredicted RBP15.83■□□□□ 0.12
NUP50-205ENST00000419387 EPRSP07814 1512 aaKnown RBP15.83■□□□□ 0.12
NUP50-205ENST00000419387 KDM6BO15054 1643 aa15.83■□□□□ 0.12
NUP50-205ENST00000419387 ZCCHC11Q5TAX3 1644 aaKnown RBP15.83■□□□□ 0.12
NUP50-205ENST00000419387 P3H3Q8IVL6 736 aa15.81■□□□□ 0.12
NUP50-205ENST00000419387 ABCA8O94911 1581 aa15.8■□□□□ 0.12
NUP50-205ENST00000419387 WDR7Q9Y4E6 1490 aa15.78■□□□□ 0.12
NUP50-205ENST00000419387 PPRC1Q5VV67 1664 aaKnown RBP15.76■□□□□ 0.11
NUP50-205ENST00000419387 KCNH8Q96L42 1107 aa15.75■□□□□ 0.11
NUP50-205ENST00000419387 MAP3K4Q9Y6R4 1608 aa15.75■□□□□ 0.11
NUP50-205ENST00000419387 TEX14Q8IWB6 1497 aa15.73■□□□□ 0.11
NUP50-205ENST00000419387 SAMD9Q5K651 1589 aa15.71■□□□□ 0.11
NUP50-205ENST00000419387 ARID3CA6NKF2 412 aa15.71■□□□□ 0.11
NUP50-205ENST00000419387 RANGAP1P46060 587 aaPredicted RBP15.71■□□□□ 0.11
NUP50-205ENST00000419387 COL17A1Q9UMD9 1497 aaPredicted RBP15.71■□□□□ 0.1
NUP50-205ENST00000419387 CD109Q6YHK3 1445 aa15.7■□□□□ 0.1
NUP50-205ENST00000419387 ATP10BO94823 1461 aa15.7■□□□□ 0.1
NUP50-205ENST00000419387 KDM4FA0A1W2PPD8 638 aa15.68■□□□□ 0.1
NUP50-205ENST00000419387 MAPK8IP2Q13387 824 aaPredicted RBP15.67■□□□□ 0.1
NUP50-205ENST00000419387 DMRT2Q9Y5R5 561 aa15.67■□□□□ 0.1
NUP50-205ENST00000419387 MAGI3Q5TCQ9 1506 aa15.67■□□□□ 0.1
NUP50-205ENST00000419387 KIF21BO75037 1637 aa15.65■□□□□ 0.1
NUP50-205ENST00000419387 CFAP43Q8NDM7 1665 aa15.65■□□□□ 0.1
NUP50-205ENST00000419387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.65■□□□□ 0.1
NUP50-205ENST00000419387 HNRNPUL2Q1KMD3 747 aaKnown RBP15.65■□□□□ 0.1
NUP50-205ENST00000419387 RAPGEF6Q8TEU7 1601 aa15.65■□□□□ 0.1
NUP50-205ENST00000419387 FHOD3Q2V2M9 1422 aa15.64■□□□□ 0.09
NUP50-205ENST00000419387 SCAF1Q9H7N4 1312 aaKnown RBP15.63■□□□□ 0.09
NUP50-205ENST00000419387 UBTFP17480 764 aaKnown RBP15.62■□□□□ 0.09
NUP50-205ENST00000419387 EHMT2Q96KQ7 1210 aa15.61■□□□□ 0.09
NUP50-205ENST00000419387 NUP153P49790 1475 aaKnown RBP15.6■□□□□ 0.09
NUP50-205ENST00000419387 EFCAB5A4FU69 1503 aa15.59■□□□□ 0.09
NUP50-205ENST00000419387 PLEKHD1A6NEE1 506 aa15.57■□□□□ 0.08
NUP50-205ENST00000419387 ABCA9Q8IUA7 1624 aa15.56■□□□□ 0.08
NUP50-205ENST00000419387 PHLDB1Q86UU1 1377 aa15.55■□□□□ 0.08
NUP50-205ENST00000419387 ARAP3Q8WWN8 1544 aa15.54■□□□□ 0.08
NUP50-205ENST00000419387 ADGRL1O94910 1474 aa15.53■□□□□ 0.08
NUP50-205ENST00000419387 NEO1Q92859 1461 aa15.5■□□□□ 0.07
NUP50-205ENST00000419387 ARHGAP35Q9NRY4 1499 aa15.49■□□□□ 0.07
NUP50-205ENST00000419387 ATP1B4Q9UN42 357 aaPredicted RBP15.49■□□□□ 0.07
NUP50-205ENST00000419387 RAPGEF3O95398 923 aa15.48■□□□□ 0.07
NUP50-205ENST00000419387 FMN1Q68DA7 1419 aa15.48■□□□□ 0.07
NUP50-205ENST00000419387 CDK13Q14004 1512 aaKnown RBP15.45■□□□□ 0.06
NUP50-205ENST00000419387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.44■□□□□ 0.06
NUP50-205ENST00000419387 CDK11AQ9UQ88 783 aaPredicted RBP15.43■□□□□ 0.06
NUP50-205ENST00000419387 AKNAQ7Z591 1439 aa15.42■□□□□ 0.06
NUP50-205ENST00000419387 HECW1Q76N89 1606 aa15.41■□□□□ 0.06
NUP50-205ENST00000419387 FANCAO15360 1455 aa15.4■□□□□ 0.06
NUP50-205ENST00000419387 DENND4BO75064 1496 aaPredicted RBP15.4■□□□□ 0.06
NUP50-205ENST00000419387 TTC37Q6PGP7 1564 aa15.38■□□□□ 0.05
NUP50-205ENST00000419387 FRMPD1Q5SYB0 1578 aa15.37■□□□□ 0.05
NUP50-205ENST00000419387 CFAP74Q9C0B2 1584 aa15.37■□□□□ 0.05
NUP50-205ENST00000419387 PLCH2O75038 1416 aa15.37■□□□□ 0.05
NUP50-205ENST00000419387 ARID4BQ4LE39 1312 aaPredicted RBP15.35■□□□□ 0.05
NUP50-205ENST00000419387 EFCAB2Q5VUJ9 269 aa15.34■□□□□ 0.05
NUP50-205ENST00000419387 TROQ12816 1431 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms