RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 CARMIL1Q5VZK9 1371 aa28.19■■■□□ 2.1
LINC00404-201ENST00000418660 PRG4Q92954 1404 aaPredicted RBP28.17■■■□□ 2.1
LINC00404-201ENST00000418660 KIAA0586Q9BVV6 1533 aa28.13■■■□□ 2.09
LINC00404-201ENST00000418660 TRHP20396 242 aaPredicted RBP28.1■■■□□ 2.09
LINC00404-201ENST00000418660 RAPGEF2Q9Y4G8 1499 aa27.98■■■□□ 2.07
LINC00404-201ENST00000418660 IQGAP2Q13576 1575 aa27.9■■■□□ 2.06
LINC00404-201ENST00000418660 CARMIL2Q6F5E8 1435 aa27.85■■■□□ 2.05
LINC00404-201ENST00000418660 PRXQ9BXM0 1461 aa27.81■■■□□ 2.04
LINC00404-201ENST00000418660 PTPRGP23470 1445 aa27.79■■■□□ 2.04
LINC00404-201ENST00000418660 TNIKQ9UKE5 1360 aa27.78■■■□□ 2.04
LINC00404-201ENST00000418660 NPM1P06748 294 aaKnown RBP eCLIP27.78■■■□□ 2.04
LINC00404-201ENST00000418660 UGGT2Q9NYU1 1516 aa27.76■■■□□ 2.03
LINC00404-201ENST00000418660 ADCY10Q96PN6 1610 aa27.75■■■□□ 2.03
LINC00404-201ENST00000418660 DISP1Q96F81 1524 aa27.74■■■□□ 2.03
LINC00404-201ENST00000418660 CSRNP3Q8WYN3 585 aa27.72■■■□□ 2.03
LINC00404-201ENST00000418660 TTBK1Q5TCY1 1321 aaPredicted RBP27.7■■■□□ 2.03
LINC00404-201ENST00000418660 CTTNBP2Q8WZ74 1663 aa27.69■■■□□ 2.02
LINC00404-201ENST00000418660 EEA1Q15075 1411 aa27.67■■■□□ 2.02
LINC00404-201ENST00000418660 MAPKBP1O60336 1514 aa27.67■■■□□ 2.02
LINC00404-201ENST00000418660 KIAA0556O60303 1618 aa27.63■■■□□ 2.01
LINC00404-201ENST00000418660 UACAQ9BZF9 1416 aa27.59■■■□□ 2.01
LINC00404-201ENST00000418660 UHRF1BP1LA0JNW5 1464 aa27.59■■■□□ 2.01
LINC00404-201ENST00000418660 ABCC10Q5T3U5 1492 aa27.59■■■□□ 2.01
LINC00404-201ENST00000418660 GOLGA3Q08378 1498 aa27.58■■■□□ 2.01
LINC00404-201ENST00000418660 KIF13AQ9H1H9 1805 aa27.58■■■□□ 2.01
LINC00404-201ENST00000418660 ABCC2Q92887 1545 aa27.57■■■□□ 2
LINC00404-201ENST00000418660 CHIC1Q5VXU3 224 aa27.57■■■□□ 2
LINC00404-201ENST00000418660 FAM69CQ0P6D2 419 aa27.55■■■□□ 2
LINC00404-201ENST00000418660 FAM9AQ8IZU1 332 aaPredicted RBP27.52■■■□□ 2
LINC00404-201ENST00000418660 DIP2BQ9P265 1576 aa27.51■■□□□ 1.99
LINC00404-201ENST00000418660 KDM5BQ9UGL1 1544 aa27.46■■□□□ 1.99
LINC00404-201ENST00000418660 PLB1Q6P1J6 1458 aa27.44■■□□□ 1.98
LINC00404-201ENST00000418660 ASXL2Q76L83 1435 aa27.43■■□□□ 1.98
LINC00404-201ENST00000418660 KIF21BO75037 1637 aa27.39■■□□□ 1.98
LINC00404-201ENST00000418660 ABCA8O94911 1581 aa27.37■■□□□ 1.97
LINC00404-201ENST00000418660 ZCCHC11Q5TAX3 1644 aaKnown RBP27.37■■□□□ 1.97
LINC00404-201ENST00000418660 P3H3Q8IVL6 736 aa27.36■■□□□ 1.97
LINC00404-201ENST00000418660 SAMD9Q5K651 1589 aa27.34■■□□□ 1.97
LINC00404-201ENST00000418660 GLI2P10070 1586 aa27.32■■□□□ 1.96
LINC00404-201ENST00000418660 EPRSP07814 1512 aaKnown RBP27.27■■□□□ 1.96
LINC00404-201ENST00000418660 RANGAP1P46060 587 aaPredicted RBP27.25■■□□□ 1.95
LINC00404-201ENST00000418660 TSPOAP1O95153 1857 aa27.25■■□□□ 1.95
LINC00404-201ENST00000418660 WDR7Q9Y4E6 1490 aa27.24■■□□□ 1.95
LINC00404-201ENST00000418660 UBTFP17480 764 aaKnown RBP27.19■■□□□ 1.94
LINC00404-201ENST00000418660 FHOD3Q2V2M9 1422 aa27.17■■□□□ 1.94
LINC00404-201ENST00000418660 EFCAB5A4FU69 1503 aa27.17■■□□□ 1.94
LINC00404-201ENST00000418660 EHMT2Q96KQ7 1210 aa27.17■■□□□ 1.94
LINC00404-201ENST00000418660 KDM6BO15054 1643 aa27.16■■□□□ 1.94
LINC00404-201ENST00000418660 ATP10BO94823 1461 aa27.16■■□□□ 1.94
LINC00404-201ENST00000418660 MAP3K4Q9Y6R4 1608 aa27.16■■□□□ 1.94
LINC00404-201ENST00000418660 RAPGEF6Q8TEU7 1601 aa27.15■■□□□ 1.94
LINC00404-201ENST00000418660 PPRC1Q5VV67 1664 aaKnown RBP27.14■■□□□ 1.94
LINC00404-201ENST00000418660 ARID3CA6NKF2 412 aa27.13■■□□□ 1.93
LINC00404-201ENST00000418660 KCNH8Q96L42 1107 aa27.12■■□□□ 1.93
LINC00404-201ENST00000418660 TEX14Q8IWB6 1497 aa27.08■■□□□ 1.93
LINC00404-201ENST00000418660 NUP153P49790 1475 aaKnown RBP27.06■■□□□ 1.92
LINC00404-201ENST00000418660 CD109Q6YHK3 1445 aa27.04■■□□□ 1.92
LINC00404-201ENST00000418660 CFAP43Q8NDM7 1665 aa27.03■■□□□ 1.92
LINC00404-201ENST00000418660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.02■■□□□ 1.92
LINC00404-201ENST00000418660 HNRNPUL2Q1KMD3 747 aaKnown RBP27.02■■□□□ 1.92
LINC00404-201ENST00000418660 MAGI3Q5TCQ9 1506 aa27■■□□□ 1.91
LINC00404-201ENST00000418660 ARHGAP35Q9NRY4 1499 aa26.99■■□□□ 1.91
LINC00404-201ENST00000418660 COL17A1Q9UMD9 1497 aaPredicted RBP26.96■■□□□ 1.91
LINC00404-201ENST00000418660 FMN1Q68DA7 1419 aa26.94■■□□□ 1.9
LINC00404-201ENST00000418660 AEBP2Q6ZN18 517 aaPredicted RBP26.93■■□□□ 1.9
LINC00404-201ENST00000418660 ABCA9Q8IUA7 1624 aa26.91■■□□□ 1.9
LINC00404-201ENST00000418660 PLEKHD1A6NEE1 506 aa26.91■■□□□ 1.9
LINC00404-201ENST00000418660 ATP1B4Q9UN42 357 aaPredicted RBP26.83■■□□□ 1.89
LINC00404-201ENST00000418660 CDK13Q14004 1512 aaKnown RBP26.82■■□□□ 1.88
LINC00404-201ENST00000418660 HECW1Q76N89 1606 aa26.82■■□□□ 1.88
LINC00404-201ENST00000418660 PHLDB1Q86UU1 1377 aa26.8■■□□□ 1.88
LINC00404-201ENST00000418660 ARAP3Q8WWN8 1544 aa26.78■■□□□ 1.88
LINC00404-201ENST00000418660 NEO1Q92859 1461 aa26.74■■□□□ 1.87
LINC00404-201ENST00000418660 CDK11AQ9UQ88 783 aaPredicted RBP26.73■■□□□ 1.87
LINC00404-201ENST00000418660 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.73■■□□□ 1.87
LINC00404-201ENST00000418660 KDM4FA0A1W2PPD8 638 aa26.72■■□□□ 1.87
LINC00404-201ENST00000418660 CLIP1P30622 1438 aa26.72■■□□□ 1.87
LINC00404-201ENST00000418660 CASKIN1Q8WXD9 1431 aa26.69■■□□□ 1.86
LINC00404-201ENST00000418660 TTC37Q6PGP7 1564 aa26.67■■□□□ 1.86
LINC00404-201ENST00000418660 PCF11O94913 1555 aaKnown RBP26.64■■□□□ 1.86
LINC00404-201ENST00000418660 LRRIQ1Q96JM4 1722 aa26.63■■□□□ 1.85
LINC00404-201ENST00000418660 RAPGEF3O95398 923 aa26.63■■□□□ 1.85
LINC00404-201ENST00000418660 TROQ12816 1431 aaPredicted RBP26.63■■□□□ 1.85
LINC00404-201ENST00000418660 FANCAO15360 1455 aa26.62■■□□□ 1.85
LINC00404-201ENST00000418660 CCDC18Q5T9S5 1454 aa26.62■■□□□ 1.85
LINC00404-201ENST00000418660 AKNAQ7Z591 1439 aa26.61■■□□□ 1.85
LINC00404-201ENST00000418660 CFAP74Q9C0B2 1584 aa26.61■■□□□ 1.85
LINC00404-201ENST00000418660 ADGRL1O94910 1474 aa26.6■■□□□ 1.85
LINC00404-201ENST00000418660 FYCO1Q9BQS8 1478 aa26.6■■□□□ 1.85
LINC00404-201ENST00000418660 PLCH2O75038 1416 aa26.59■■□□□ 1.85
LINC00404-201ENST00000418660 KIF14Q15058 1648 aa26.57■■□□□ 1.84
LINC00404-201ENST00000418660 DENND4BO75064 1496 aaPredicted RBP26.55■■□□□ 1.84
LINC00404-201ENST00000418660 FRMPD1Q5SYB0 1578 aa26.55■■□□□ 1.84
LINC00404-201ENST00000418660 CEP162Q5TB80 1403 aa26.51■■□□□ 1.83
LINC00404-201ENST00000418660 EFCAB2Q5VUJ9 269 aa26.51■■□□□ 1.83
LINC00404-201ENST00000418660 MYO5CQ9NQX4 1742 aa26.51■■□□□ 1.83
LINC00404-201ENST00000418660 RICTORQ6R327 1708 aa26.48■■□□□ 1.83
LINC00404-201ENST00000418660 SCAPERQ9BY12 1400 aa26.46■■□□□ 1.83
LINC00404-201ENST00000418660 LOC105371045A0A1W2PR82 267 aa26.44■■□□□ 1.82
LINC00404-201ENST00000418660 ARHGAP5Q13017 1502 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms